RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 ORAI2Q96SN7 254 aa13.02□□□□□ -0.33
DDX39B-221ENST00000484566 MYOM2P54296 1465 aa13.02□□□□□ -0.33
DDX39B-221ENST00000484566 CLTCL1P53675 1640 aa13.02□□□□□ -0.33
DDX39B-221ENST00000484566 TNKS1BP1Q9C0C2 1729 aaKnown RBP13□□□□□ -0.33
DDX39B-221ENST00000484566 ROBO2Q9HCK4 1378 aa13□□□□□ -0.33
DDX39B-221ENST00000484566 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
DDX39B-221ENST00000484566 HFM1A2PYH4 1435 aa12.99□□□□□ -0.33
DDX39B-221ENST00000484566 PRAG1Q86YV5 1406 aa12.99□□□□□ -0.33
DDX39B-221ENST00000484566 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
DDX39B-221ENST00000484566 EN1Q05925 392 aaPredicted RBP12.98□□□□□ -0.33
DDX39B-221ENST00000484566 NINLQ9Y2I6 1382 aa12.97□□□□□ -0.33
DDX39B-221ENST00000484566 PYGBP11216 843 aa12.97□□□□□ -0.33
DDX39B-221ENST00000484566 ITGAEP38570 1179 aa12.97□□□□□ -0.33
DDX39B-221ENST00000484566 GLI3P10071 1580 aa12.97□□□□□ -0.33
DDX39B-221ENST00000484566 LRPPRCP42704 1394 aaKnown RBP12.96□□□□□ -0.33
DDX39B-221ENST00000484566 GABBR2O75899 941 aa12.96□□□□□ -0.33
DDX39B-221ENST00000484566 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.33
DDX39B-221ENST00000484566 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
DDX39B-221ENST00000484566 KIF12Q96FN5 646 aa12.96□□□□□ -0.33
DDX39B-221ENST00000484566 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
DDX39B-221ENST00000484566 PCDH10Q9P2E7 1040 aa12.96□□□□□ -0.33
DDX39B-221ENST00000484566 PXDNQ92626 1479 aa12.96□□□□□ -0.34
DDX39B-221ENST00000484566 VGFO15240 615 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-221ENST00000484566 RALGAPBQ86X10 1494 aa12.95□□□□□ -0.34
DDX39B-221ENST00000484566 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-221ENST00000484566 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-221ENST00000484566 UNC5CLQ8IV45 518 aa12.93□□□□□ -0.34
DDX39B-221ENST00000484566 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
DDX39B-221ENST00000484566 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
DDX39B-221ENST00000484566 MAP3K13O43283 966 aa12.92□□□□□ -0.34
DDX39B-221ENST00000484566 FOXO3O43524 673 aa12.92□□□□□ -0.34
DDX39B-221ENST00000484566 GIGYF1O75420 1035 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-221ENST00000484566 KRT27Q7Z3Y8 459 aa12.92□□□□□ -0.34
DDX39B-221ENST00000484566 SLIT2O94813 1529 aa12.92□□□□□ -0.34
DDX39B-221ENST00000484566 PPLO60437 1756 aa12.92□□□□□ -0.34
DDX39B-221ENST00000484566 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
DDX39B-221ENST00000484566 KIF1AQ12756 1690 aa12.91□□□□□ -0.34
DDX39B-221ENST00000484566 RGPD1P0DJD0 1748 aa12.91□□□□□ -0.34
DDX39B-221ENST00000484566 RPGRIP1LQ68CZ1 1315 aa12.9□□□□□ -0.34
DDX39B-221ENST00000484566 HAP1P54257 671 aaPredicted RBP12.9□□□□□ -0.34
DDX39B-221ENST00000484566 CCDC144AA2RUR9 1427 aa12.89□□□□□ -0.35
DDX39B-221ENST00000484566 NAIPQ13075 1403 aa12.89□□□□□ -0.35
DDX39B-221ENST00000484566 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-221ENST00000484566 ECM2O94769 699 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-221ENST00000484566 SPON1Q9HCB6 807 aa12.89□□□□□ -0.35
DDX39B-221ENST00000484566 PLCH1Q4KWH8 1693 aa12.88□□□□□ -0.35
DDX39B-221ENST00000484566 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
DDX39B-221ENST00000484566 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
DDX39B-221ENST00000484566 KCNQ2O43526 872 aa12.87□□□□□ -0.35
DDX39B-221ENST00000484566 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
DDX39B-221ENST00000484566 ZNF467Q7Z7K2 595 aaPredicted RBP12.87□□□□□ -0.35
DDX39B-221ENST00000484566 MS4A3Q96HJ5 214 aa12.87□□□□□ -0.35
DDX39B-221ENST00000484566 CCDC9Q9Y3X0 531 aaKnown RBP12.87□□□□□ -0.35
DDX39B-221ENST00000484566 DISP2A7MBM2 1401 aa12.87□□□□□ -0.35
DDX39B-221ENST00000484566 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
DDX39B-221ENST00000484566 KNDC1Q76NI1 1749 aa12.86□□□□□ -0.35
DDX39B-221ENST00000484566 FMN2Q9NZ56 1722 aa12.86□□□□□ -0.35
DDX39B-221ENST00000484566 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
DDX39B-221ENST00000484566 TECPR2O15040 1411 aa12.86□□□□□ -0.35
DDX39B-221ENST00000484566 A0A0G2JS52 829 aa12.85□□□□□ -0.35
DDX39B-221ENST00000484566 MYT1Q01538 1121 aa12.85□□□□□ -0.35
DDX39B-221ENST00000484566 VPS72Q15906 364 aa12.85□□□□□ -0.35
DDX39B-221ENST00000484566 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
DDX39B-221ENST00000484566 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
DDX39B-221ENST00000484566 TNS3Q68CZ2 1445 aa12.85□□□□□ -0.35
DDX39B-221ENST00000484566 TNS1Q9HBL0 1735 aaKnown RBP12.84□□□□□ -0.35
DDX39B-221ENST00000484566 ABCA3Q99758 1704 aa12.83□□□□□ -0.36
DDX39B-221ENST00000484566 RRBP1Q9P2E9 1410 aaKnown RBP12.83□□□□□ -0.36
DDX39B-221ENST00000484566 CAMKK2Q96RR4 588 aa12.83□□□□□ -0.36
DDX39B-221ENST00000484566 STK26Q9P289 416 aa12.83□□□□□ -0.36
DDX39B-221ENST00000484566 IFT172Q9UG01 1749 aa12.82□□□□□ -0.36
DDX39B-221ENST00000484566 PSME1Q06323 249 aa12.82□□□□□ -0.36
DDX39B-221ENST00000484566 KRT28Q7Z3Y7 464 aa12.82□□□□□ -0.36
DDX39B-221ENST00000484566 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
DDX39B-221ENST00000484566 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
DDX39B-221ENST00000484566 PRELPP51888 382 aa12.81□□□□□ -0.36
DDX39B-221ENST00000484566 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
DDX39B-221ENST00000484566 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
DDX39B-221ENST00000484566 ABCC11Q96J66 1382 aa12.81□□□□□ -0.36
DDX39B-221ENST00000484566 LMOD2Q6P5Q4 547 aa12.8□□□□□ -0.36
DDX39B-221ENST00000484566 PLEKHH1Q9ULM0 1364 aa12.8□□□□□ -0.36
DDX39B-221ENST00000484566 CABLES1Q8TDN4 633 aa12.79□□□□□ -0.36
DDX39B-221ENST00000484566 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
DDX39B-221ENST00000484566 ADGRF5Q8IZF2 1346 aa12.79□□□□□ -0.36
DDX39B-221ENST00000484566 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
DDX39B-221ENST00000484566 ANKRD30BQ9BXX2 1392 aa12.79□□□□□ -0.36
DDX39B-221ENST00000484566 RGPD8O14715 1765 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-221ENST00000484566 PCDHB8Q9UN66 801 aa12.78□□□□□ -0.36
DDX39B-221ENST00000484566 NRAPQ86VF7 1730 aa12.78□□□□□ -0.36
DDX39B-221ENST00000484566 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
DDX39B-221ENST00000484566 RREB1Q92766 1687 aa12.77□□□□□ -0.36
DDX39B-221ENST00000484566 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
DDX39B-221ENST00000484566 ADGRB2O60241 1585 aa12.77□□□□□ -0.37
DDX39B-221ENST00000484566 NUP188Q5SRE5 1749 aa12.76□□□□□ -0.37
DDX39B-221ENST00000484566 HSPA6P17066 643 aa12.76□□□□□ -0.37
DDX39B-221ENST00000484566 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
DDX39B-221ENST00000484566 TMEM132EQ6IEE7 984 aa12.76□□□□□ -0.37
DDX39B-221ENST00000484566 PIK3C2GO75747 1445 aa12.76□□□□□ -0.37
DDX39B-221ENST00000484566 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
DDX39B-221ENST00000484566 TIE1P35590 1138 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms