RNA–Protein interactions for RNA: ENST00000483560.1

SNX12-204, Transcript of sorting nexin 12, humanhuman

TSL 5

Gene SNX12, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-204ENST00000483560 OXER1Q8TDS5 423 aa9.56□□□□□ -0.88
SNX12-204ENST00000483560 PTCD2Q8WV60 388 aaKnown RBP9.56□□□□□ -0.88
SNX12-204ENST00000483560 MPHOSPH9Q99550 1183 aa9.56□□□□□ -0.88
SNX12-204ENST00000483560 POLR1AO95602 1720 aaPredicted RBP9.56□□□□□ -0.88
SNX12-204ENST00000483560 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
SNX12-204ENST00000483560 MED14O60244 1454 aa9.55□□□□□ -0.88
SNX12-204ENST00000483560 TMEM94Q12767 1356 aa9.55□□□□□ -0.88
SNX12-204ENST00000483560 TBC1D12O60347 775 aa9.55□□□□□ -0.88
SNX12-204ENST00000483560 UPF1Q92900 1129 aaKnown RBP eCLIP9.55□□□□□ -0.889e-9■■■■■ 35.7
SNX12-204ENST00000483560 TBX22Q9Y458 520 aa9.55□□□□□ -0.88
SNX12-204ENST00000483560 VWDEQ8N2E2 1590 aa9.54□□□□□ -0.88
SNX12-204ENST00000483560 NEURL4Q96JN8 1562 aa9.54□□□□□ -0.88
SNX12-204ENST00000483560 PLEKHG1Q9ULL1 1385 aa9.54□□□□□ -0.88
SNX12-204ENST00000483560 RIMBP2O15034 1052 aa9.54□□□□□ -0.88
SNX12-204ENST00000483560 HOXB3P14651 431 aaPredicted RBP9.54□□□□□ -0.88
SNX12-204ENST00000483560 MAP3K9P80192 1104 aa9.54□□□□□ -0.88
SNX12-204ENST00000483560 AMOTL2Q9Y2J4 779 aa9.54□□□□□ -0.88
SNX12-204ENST00000483560 ALKQ9UM73 1620 aa9.53□□□□□ -0.88
SNX12-204ENST00000483560 MSH6P52701 1360 aa9.53□□□□□ -0.88
SNX12-204ENST00000483560 LRRC7Q96NW7 1537 aa9.53□□□□□ -0.88
SNX12-204ENST00000483560 DPYSL4O14531 572 aa9.53□□□□□ -0.88
SNX12-204ENST00000483560 ARHGAP23Q9P227 1491 aa9.53□□□□□ -0.88
SNX12-204ENST00000483560 ADGRB3O60242 1522 aa9.52□□□□□ -0.88
SNX12-204ENST00000483560 SLIT1O75093 1534 aa9.52□□□□□ -0.88
SNX12-204ENST00000483560 CEP152O94986 1710 aa9.52□□□□□ -0.89
SNX12-204ENST00000483560 NBR1Q14596 966 aa9.52□□□□□ -0.89
SNX12-204ENST00000483560 ZNF710Q8N1W2 664 aa9.52□□□□□ -0.89
SNX12-204ENST00000483560 ZSWIM6Q9HCJ5 1215 aa9.52□□□□□ -0.89
SNX12-204ENST00000483560 SETD5Q9C0A6 1442 aa9.51□□□□□ -0.89
SNX12-204ENST00000483560 SLAIN2Q9P270 581 aa9.51□□□□□ -0.89
SNX12-204ENST00000483560 PCDHGA4Q9Y5G9 962 aa9.51□□□□□ -0.89
SNX12-204ENST00000483560 DEPDC5O75140 1603 aa9.51□□□□□ -0.89
SNX12-204ENST00000483560 CCDC144AA2RUR9 1427 aa9.5□□□□□ -0.89
SNX12-204ENST00000483560 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
SNX12-204ENST00000483560 MEX3CQ5U5Q3 659 aaKnown RBP9.5□□□□□ -0.89
SNX12-204ENST00000483560 STK26Q9P289 416 aa9.5□□□□□ -0.89
SNX12-204ENST00000483560 RPGRIP1LQ68CZ1 1315 aa9.5□□□□□ -0.89
SNX12-204ENST00000483560 SYNMO15061 1565 aa9.5□□□□□ -0.89
SNX12-204ENST00000483560 PIK3C2BO00750 1634 aa9.49□□□□□ -0.89
SNX12-204ENST00000483560 C19orf44Q9H6X5 657 aa9.49□□□□□ -0.89
SNX12-204ENST00000483560 IQGAP1P46940 1657 aa9.48□□□□□ -0.89
SNX12-204ENST00000483560 SETD1AO15047 1707 aaKnown RBP9.48□□□□□ -0.89
SNX12-204ENST00000483560 PDIA6Q15084 440 aa9.48□□□□□ -0.89
SNX12-204ENST00000483560 UNC13BO14795 1591 aa9.48□□□□□ -0.89
SNX12-204ENST00000483560 RAB3GAP2Q9H2M9 1393 aa9.48□□□□□ -0.89
SNX12-204ENST00000483560 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
SNX12-204ENST00000483560 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
SNX12-204ENST00000483560 GPR153Q6NV75 609 aa9.47□□□□□ -0.89
SNX12-204ENST00000483560 TET3O43151 1660 aa9.47□□□□□ -0.89
SNX12-204ENST00000483560 ZNF316A6NFI3 1004 aaPredicted RBP9.46□□□□□ -0.9
SNX12-204ENST00000483560 EVI5O60447 810 aa9.46□□□□□ -0.9
SNX12-204ENST00000483560 ARSIQ5FYB1 569 aa9.46□□□□□ -0.9
SNX12-204ENST00000483560 ZNF772Q68DY9 489 aaPredicted RBP9.45□□□□□ -0.9
SNX12-204ENST00000483560 PIK3R4Q99570 1358 aa9.45□□□□□ -0.9
SNX12-204ENST00000483560 IQGAP3Q86VI3 1631 aa9.45□□□□□ -0.9
SNX12-204ENST00000483560 UBR1Q8IWV7 1749 aa9.45□□□□□ -0.9
SNX12-204ENST00000483560 STRCP1A6NGW2 1772 aa9.45□□□□□ -0.9
SNX12-204ENST00000483560 RXRBP28702 533 aa9.44□□□□□ -0.9
SNX12-204ENST00000483560 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
SNX12-204ENST00000483560 METP08581 1390 aa9.44□□□□□ -0.9
SNX12-204ENST00000483560 NKTRP30414 1462 aaKnown RBP9.43□□□□□ -0.9
SNX12-204ENST00000483560 JCADQ9P266 1359 aa9.43□□□□□ -0.9
SNX12-204ENST00000483560 SEMA3EO15041 775 aa9.43□□□□□ -0.9
SNX12-204ENST00000483560 HOXB1P14653 301 aaPredicted RBP9.43□□□□□ -0.9
SNX12-204ENST00000483560 ADAMTS13Q76LX8 1427 aa9.42□□□□□ -0.9
SNX12-204ENST00000483560 ANKRD30BQ9BXX2 1392 aa9.42□□□□□ -0.9
SNX12-204ENST00000483560 ADGRF5Q8IZF2 1346 aa9.42□□□□□ -0.9
SNX12-204ENST00000483560 NUTM2BA6NNL0 878 aaPredicted RBP9.42□□□□□ -0.9
SNX12-204ENST00000483560 NUTM2EB1AL46 878 aaPredicted RBP9.42□□□□□ -0.9
SNX12-204ENST00000483560 NUDT7P0C024 238 aa9.42□□□□□ -0.9
SNX12-204ENST00000483560 TMEM132EQ6IEE7 984 aa9.42□□□□□ -0.9
SNX12-204ENST00000483560 NUTM2AQ8IVF1 878 aaPredicted RBP9.42□□□□□ -0.9
SNX12-204ENST00000483560 DCAF11Q8TEB1 546 aa9.42□□□□□ -0.9
SNX12-204ENST00000483560 KHSRPQ92945 711 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNX12-204ENST00000483560 POGKQ9P215 609 aa9.42□□□□□ -0.9
SNX12-204ENST00000483560 DAXXQ9UER7 740 aaPredicted RBP9.42□□□□□ -0.9
SNX12-204ENST00000483560 TRPM2O94759 1503 aa9.41□□□□□ -0.9
SNX12-204ENST00000483560 NUTM2FA1L443 756 aa9.41□□□□□ -0.9
SNX12-204ENST00000483560 SAFB2Q14151 953 aaKnown RBP eCLIP9.41□□□□□ -0.9
SNX12-204ENST00000483560 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
SNX12-204ENST00000483560 ST18O60284 1047 aa9.4□□□□□ -0.9
SNX12-204ENST00000483560 PTGER2P43116 358 aa9.4□□□□□ -0.9
SNX12-204ENST00000483560 FAM163AQ96GL9 167 aaPredicted RBP9.4□□□□□ -0.9
SNX12-204ENST00000483560 TMEM131LA2VDJ0 1609 aa9.4□□□□□ -0.9
SNX12-204ENST00000483560 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
SNX12-204ENST00000483560 E9PCH4 1651 aa9.39□□□□□ -0.91
SNX12-204ENST00000483560 ROBO1Q9Y6N7 1651 aa9.39□□□□□ -0.91
SNX12-204ENST00000483560 HRCP23327 699 aa9.39□□□□□ -0.91
SNX12-204ENST00000483560 ESCO1Q5FWF5 840 aa9.39□□□□□ -0.91
SNX12-204ENST00000483560 SMYD5Q6GMV2 418 aa9.39□□□□□ -0.91
SNX12-204ENST00000483560 GCC2Q8IWJ2 1684 aa9.39□□□□□ -0.91
SNX12-204ENST00000483560 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
SNX12-204ENST00000483560 NEUROD1Q13562 356 aa9.38□□□□□ -0.91
SNX12-204ENST00000483560 CFAP70Q5T0N1 1121 aa9.38□□□□□ -0.91
SNX12-204ENST00000483560 BRINP3Q76B58 766 aa9.38□□□□□ -0.91
SNX12-204ENST00000483560 WAPLQ7Z5K2 1190 aa9.38□□□□□ -0.91
SNX12-204ENST00000483560 PTPRUQ92729 1446 aa9.38□□□□□ -0.91
SNX12-204ENST00000483560 DHX57Q6P158 1386 aaKnown RBP9.37□□□□□ -0.91
SNX12-204ENST00000483560 SPATA31A6Q5VVP1 1343 aa9.37□□□□□ -0.91
SNX12-204ENST00000483560 LRRC59Q96AG4 307 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms