RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 FANCAO15360 1455 aa5.23□□□□□ -1.57
SMC6-208ENST00000481708 WNK3Q9BYP7 1800 aa5.23□□□□□ -1.57
SMC6-208ENST00000481708 NOM1Q5C9Z4 860 aaKnown RBP5.23□□□□□ -1.57
SMC6-208ENST00000481708 PTCD2Q8WV60 388 aaKnown RBP5.23□□□□□ -1.57
SMC6-208ENST00000481708 NRXN3Q9Y4C0 1643 aa5.23□□□□□ -1.57
SMC6-208ENST00000481708 PHOX2BQ99453 314 aa5.23□□□□□ -1.57
SMC6-208ENST00000481708 GPATCH8Q9UKJ3 1502 aaKnown RBP5.22□□□□□ -1.57
SMC6-208ENST00000481708 POM121CA8CG34 1229 aa5.22□□□□□ -1.57
SMC6-208ENST00000481708 E9PSI1 815 aa5.22□□□□□ -1.57
SMC6-208ENST00000481708 MAP2K5Q13163 448 aa5.22□□□□□ -1.57
SMC6-208ENST00000481708 FBXW7Q969H0 707 aa5.22□□□□□ -1.57
SMC6-208ENST00000481708 SNRKQ9NRH2 765 aa5.22□□□□□ -1.57
SMC6-208ENST00000481708 C9orf84Q5VXU9 1444 aa5.22□□□□□ -1.57
SMC6-208ENST00000481708 CARMIL2Q6F5E8 1435 aa5.22□□□□□ -1.57
SMC6-208ENST00000481708 QSER1Q2KHR3 1735 aa5.22□□□□□ -1.57
SMC6-208ENST00000481708 C7P10643 843 aa5.22□□□□□ -1.57
SMC6-208ENST00000481708 PLCH2O75038 1416 aa5.22□□□□□ -1.57
SMC6-208ENST00000481708 SRPK2P78362 688 aaKnown RBP5.22□□□□□ -1.57
SMC6-208ENST00000481708 GIGYF2Q6Y7W6 1299 aaKnown RBP5.22□□□□□ -1.57
SMC6-208ENST00000481708 KIAA1522Q9P206 1035 aaPredicted RBP5.22□□□□□ -1.57
SMC6-208ENST00000481708 GNPATO15228 680 aa5.21□□□□□ -1.58
SMC6-208ENST00000481708 PTGDRQ13258 359 aa5.21□□□□□ -1.58
SMC6-208ENST00000481708 USP35Q9P2H5 1018 aa5.21□□□□□ -1.58
SMC6-208ENST00000481708 MINK1Q8N4C8 1332 aaPredicted RBP5.21□□□□□ -1.58
SMC6-208ENST00000481708 MED1Q15648 1581 aaPredicted RBP5.21□□□□□ -1.58
SMC6-208ENST00000481708 AHDC1Q5TGY3 1603 aaPredicted RBP5.21□□□□□ -1.58
SMC6-208ENST00000481708 ADAMTS19Q8TE59 1207 aa5.21□□□□□ -1.58
SMC6-208ENST00000481708 CDHR5Q9HBB8 845 aa5.21□□□□□ -1.58
SMC6-208ENST00000481708 ANO8Q9HCE9 1232 aaPredicted RBP5.21□□□□□ -1.58
SMC6-208ENST00000481708 TTBK1Q5TCY1 1321 aaPredicted RBP5.21□□□□□ -1.58
SMC6-208ENST00000481708 KIAA1107Q9UPP5 1409 aa5.2□□□□□ -1.58
SMC6-208ENST00000481708 SLC34A2O95436 690 aa5.2□□□□□ -1.58
SMC6-208ENST00000481708 HIC1Q14526 733 aa5.2□□□□□ -1.58
SMC6-208ENST00000481708 NPDC1Q9NQX5 325 aaPredicted RBP5.2□□□□□ -1.58
SMC6-208ENST00000481708 CEP152O94986 1710 aa5.2□□□□□ -1.58
SMC6-208ENST00000481708 QRICH2Q9H0J4 1663 aa5.2□□□□□ -1.58
SMC6-208ENST00000481708 PLEKHH2Q8IVE3 1493 aa5.19□□□□□ -1.58
SMC6-208ENST00000481708 TBC1D12O60347 775 aa5.19□□□□□ -1.58
SMC6-208ENST00000481708 C3orf67Q6ZVT6 689 aa5.19□□□□□ -1.58
SMC6-208ENST00000481708 RTEL1-TNFRSF6BF6WH68 1400 aa5.19□□□□□ -1.58
SMC6-208ENST00000481708 CCDC97Q96F63 343 aaPredicted RBP5.19□□□□□ -1.58
SMC6-208ENST00000481708 CCDC18Q5T9S5 1454 aa5.19□□□□□ -1.58
SMC6-208ENST00000481708 FCHSD2O94868 740 aa5.19□□□□□ -1.58
SMC6-208ENST00000481708 TMUB1Q9BVT8 246 aa5.19□□□□□ -1.58
SMC6-208ENST00000481708 ATP10AO60312 1499 aa5.18□□□□□ -1.58
SMC6-208ENST00000481708 FYCO1Q9BQS8 1478 aa5.18□□□□□ -1.58
SMC6-208ENST00000481708 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.18□□□□□ -1.58
SMC6-208ENST00000481708 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.18□□□□□ -1.58
SMC6-208ENST00000481708 COL16A1Q07092 1604 aaPredicted RBP5.18□□□□□ -1.58
SMC6-208ENST00000481708 SHANK2Q9UPX8 1470 aa5.18□□□□□ -1.58
SMC6-208ENST00000481708 TSR1Q2NL82 804 aaKnown RBP5.18□□□□□ -1.58
SMC6-208ENST00000481708 EN1Q05925 392 aaPredicted RBP5.17□□□□□ -1.58
SMC6-208ENST00000481708 TXNDC2Q86VQ3 553 aa5.17□□□□□ -1.58
SMC6-208ENST00000481708 PCDHGA10Q9Y5H3 936 aa5.17□□□□□ -1.58
SMC6-208ENST00000481708 RREB1Q92766 1687 aa5.17□□□□□ -1.58
SMC6-208ENST00000481708 POTEJP0CG39 1038 aa5.17□□□□□ -1.58
SMC6-208ENST00000481708 ABCC3O15438 1527 aa5.17□□□□□ -1.58
SMC6-208ENST00000481708 MBD5Q9P267 1494 aa5.17□□□□□ -1.58
SMC6-208ENST00000481708 SH3D19Q5HYK7 790 aa5.16□□□□□ -1.58
SMC6-208ENST00000481708 CARMIL1Q5VZK9 1371 aa5.16□□□□□ -1.58
SMC6-208ENST00000481708 ATP7AQ04656 1500 aa5.16□□□□□ -1.58
SMC6-208ENST00000481708 NALCNQ8IZF0 1738 aa5.16□□□□□ -1.58
SMC6-208ENST00000481708 PCDHGA4Q9Y5G9 962 aa5.16□□□□□ -1.58
SMC6-208ENST00000481708 PTPRGP23470 1445 aa5.16□□□□□ -1.58
SMC6-208ENST00000481708 AMOTL2Q9Y2J4 779 aa5.16□□□□□ -1.58
SMC6-208ENST00000481708 GPR37L1O60883 481 aa5.15□□□□□ -1.58
SMC6-208ENST00000481708 PHF14O94880 888 aa5.15□□□□□ -1.58
SMC6-208ENST00000481708 MTMR14Q8NCE2 650 aa5.15□□□□□ -1.58
SMC6-208ENST00000481708 ARHGAP31Q2M1Z3 1444 aa5.15□□□□□ -1.58
SMC6-208ENST00000481708 CNTLNQ9NXG0 1405 aa5.15□□□□□ -1.58
SMC6-208ENST00000481708 CDK13Q14004 1512 aaKnown RBP5.15□□□□□ -1.59
SMC6-208ENST00000481708 SKIV2LQ15477 1246 aaKnown RBP5.15□□□□□ -1.59
SMC6-208ENST00000481708 RBM33Q96EV2 1170 aaKnown RBP5.15□□□□□ -1.59
SMC6-208ENST00000481708 IVNS1ABPQ9Y6Y0 642 aa5.15□□□□□ -1.59
SMC6-208ENST00000481708 TTLL12Q14166 644 aaPredicted RBP5.15□□□□□ -1.59
SMC6-208ENST00000481708 CFAP70Q5T0N1 1121 aa5.15□□□□□ -1.59
SMC6-208ENST00000481708 JPH4Q96JJ6 628 aa5.15□□□□□ -1.59
SMC6-208ENST00000481708 GDPD2Q9HCC8 539 aa5.14□□□□□ -1.59
SMC6-208ENST00000481708 ZNF330Q9Y3S2 320 aaPredicted RBP5.14□□□□□ -1.59
SMC6-208ENST00000481708 MAP3K7O43318 606 aa5.14□□□□□ -1.59
SMC6-208ENST00000481708 SP7Q8TDD2 431 aaPredicted RBP5.14□□□□□ -1.59
SMC6-208ENST00000481708 GLMNQ92990 594 aa5.14□□□□□ -1.59
SMC6-208ENST00000481708 NRAPQ86VF7 1730 aa5.14□□□□□ -1.59
SMC6-208ENST00000481708 MYT1Q01538 1121 aa5.14□□□□□ -1.59
SMC6-208ENST00000481708 FAM161AQ3B820 660 aa5.14□□□□□ -1.59
SMC6-208ENST00000481708 MYO5BQ9ULV0 1848 aa5.14□□□□□ -1.59
SMC6-208ENST00000481708 PTPRKQ15262 1439 aa5.13□□□□□ -1.59
SMC6-208ENST00000481708 PZPP20742 1482 aa5.13□□□□□ -1.59
SMC6-208ENST00000481708 CDK12Q9NYV4 1490 aaPredicted RBP5.13□□□□□ -1.59
SMC6-208ENST00000481708 TMEM88BA6NKF7 163 aa5.13□□□□□ -1.59
SMC6-208ENST00000481708 POTEB2H3BUK9 544 aa5.13□□□□□ -1.59
SMC6-208ENST00000481708 KHSRPQ92945 711 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMC6-208ENST00000481708 SLAIN1Q8ND83 568 aa5.13□□□□□ -1.59
SMC6-208ENST00000481708 PCMTD1Q96MG8 357 aaPredicted RBP5.13□□□□□ -1.59
SMC6-208ENST00000481708 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.13□□□□□ -1.59
SMC6-208ENST00000481708 ARHGAP35Q9NRY4 1499 aa5.13□□□□□ -1.59
SMC6-208ENST00000481708 LRP6O75581 1613 aa5.13□□□□□ -1.59
SMC6-208ENST00000481708 BRD1O95696 1058 aa5.13□□□□□ -1.59
SMC6-208ENST00000481708 SND1Q7KZF4 910 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMC6-208ENST00000481708 NLRP7Q8WX94 980 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms