RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 KIDINS220Q9ULH0 1771 aa7.55□□□□□ -1.2
PTCD3-213ENST00000480102 ROCK1Q13464 1354 aa7.55□□□□□ -1.2
PTCD3-213ENST00000480102 ADGRL2O95490 1459 aa7.55□□□□□ -1.2
PTCD3-213ENST00000480102 KDM5DQ9BY66 1539 aa7.54□□□□□ -1.2
PTCD3-213ENST00000480102 ABCA6Q8N139 1617 aa7.54□□□□□ -1.2
PTCD3-213ENST00000480102 NUTM2FA1L443 756 aa7.54□□□□□ -1.2
PTCD3-213ENST00000480102 RBM26Q5T8P6 1007 aaKnown RBP7.54□□□□□ -1.2
PTCD3-213ENST00000480102 TTC13Q8NBP0 860 aa7.54□□□□□ -1.2
PTCD3-213ENST00000480102 WNT2BQ93097 391 aa7.54□□□□□ -1.2
PTCD3-213ENST00000480102 NCOA1Q15788 1441 aa7.53□□□□□ -1.2
PTCD3-213ENST00000480102 DUOX2Q9NRD8 1548 aa7.53□□□□□ -1.2
PTCD3-213ENST00000480102 NBPF26B4DH59 902 aa7.53□□□□□ -1.2
PTCD3-213ENST00000480102 FAM98CQ17RN3 349 aaKnown RBP7.53□□□□□ -1.2
PTCD3-213ENST00000480102 PADI6Q6TGC4 694 aa7.53□□□□□ -1.2
PTCD3-213ENST00000480102 ACIN1Q9UKV3 1341 aaKnown RBP7.52□□□□□ -1.2
PTCD3-213ENST00000480102 DAPK1P53355 1430 aa7.52□□□□□ -1.2
PTCD3-213ENST00000480102 ARHGAP31Q2M1Z3 1444 aa7.52□□□□□ -1.2
PTCD3-213ENST00000480102 RRBP1Q9P2E9 1410 aaKnown RBP7.52□□□□□ -1.2
PTCD3-213ENST00000480102 ZMYM3Q14202 1370 aa7.52□□□□□ -1.21
PTCD3-213ENST00000480102 ANKRD30AQ9BXX3 1397 aa7.52□□□□□ -1.21
PTCD3-213ENST00000480102 C3orf80F5H4A9 247 aa7.52□□□□□ -1.21
PTCD3-213ENST00000480102 THSD4Q6ZMP0 1018 aa7.52□□□□□ -1.21
PTCD3-213ENST00000480102 ZFRQ96KR1 1074 aaKnown RBP7.52□□□□□ -1.21
PTCD3-213ENST00000480102 HCSTQ9UBK5 93 aa7.52□□□□□ -1.21
PTCD3-213ENST00000480102 FCHSD2O94868 740 aa7.51□□□□□ -1.21
PTCD3-213ENST00000480102 ANKK1Q8NFD2 765 aa7.51□□□□□ -1.21
PTCD3-213ENST00000480102 TATDN2Q93075 761 aa7.51□□□□□ -1.21
PTCD3-213ENST00000480102 BCANQ96GW7 911 aa7.51□□□□□ -1.21
PTCD3-213ENST00000480102 ESF1Q9H501 851 aaKnown RBP7.51□□□□□ -1.21
PTCD3-213ENST00000480102 PNMA3Q9UL41 463 aa7.51□□□□□ -1.21
PTCD3-213ENST00000480102 ADGBQ8N7X0 1667 aa7.51□□□□□ -1.21
PTCD3-213ENST00000480102 LMTK3Q96Q04 1460 aa7.5□□□□□ -1.21
PTCD3-213ENST00000480102 KIF15Q9NS87 1388 aa7.5□□□□□ -1.21
PTCD3-213ENST00000480102 MADDQ8WXG6 1647 aa7.5□□□□□ -1.21
PTCD3-213ENST00000480102 EIF2AK4Q9P2K8 1649 aaKnown RBP7.5□□□□□ -1.21
PTCD3-213ENST00000480102 SMAPO00193 183 aa7.5□□□□□ -1.21
PTCD3-213ENST00000480102 NUDT18Q6ZVK8 323 aa7.5□□□□□ -1.21
PTCD3-213ENST00000480102 DNMT1P26358 1616 aaKnown RBP7.49□□□□□ -1.21
PTCD3-213ENST00000480102 PTPN23Q9H3S7 1636 aa7.49□□□□□ -1.21
PTCD3-213ENST00000480102 LMTK2Q8IWU2 1503 aa7.49□□□□□ -1.21
PTCD3-213ENST00000480102 TULP1O00294 542 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-213ENST00000480102 PTPRKQ15262 1439 aa7.49□□□□□ -1.21
PTCD3-213ENST00000480102 PZPP20742 1482 aa7.49□□□□□ -1.21
PTCD3-213ENST00000480102 MROH2AA6NES4 1674 aa7.48□□□□□ -1.21
PTCD3-213ENST00000480102 SOWAHBA6NEL2 793 aa7.48□□□□□ -1.21
PTCD3-213ENST00000480102 KIF3BO15066 747 aa7.48□□□□□ -1.21
PTCD3-213ENST00000480102 GPR37O15354 613 aa7.48□□□□□ -1.21
PTCD3-213ENST00000480102 BCAMP50895 628 aa7.48□□□□□ -1.21
PTCD3-213ENST00000480102 PTPN5P54829 565 aa7.48□□□□□ -1.21
PTCD3-213ENST00000480102 HIC1Q14526 733 aa7.48□□□□□ -1.21
PTCD3-213ENST00000480102 UHRF1BP1Q6BDS2 1440 aa7.48□□□□□ -1.21
PTCD3-213ENST00000480102 GPIHBP1Q8IV16 184 aa7.48□□□□□ -1.21
PTCD3-213ENST00000480102 SIGLEC1Q9BZZ2 1709 aa7.48□□□□□ -1.21
PTCD3-213ENST00000480102 RNF17Q9BXT8 1623 aaKnown RBP7.48□□□□□ -1.21
PTCD3-213ENST00000480102 PRDM15P57071 1507 aaPredicted RBP7.47□□□□□ -1.21
PTCD3-213ENST00000480102 ANKRD50Q9ULJ7 1429 aa7.47□□□□□ -1.21
PTCD3-213ENST00000480102 PLA2R1Q13018 1463 aa7.47□□□□□ -1.21
PTCD3-213ENST00000480102 NLRP1Q9C000 1473 aa7.47□□□□□ -1.21
PTCD3-213ENST00000480102 WASHC2CQ9Y4E1 1318 aa7.47□□□□□ -1.21
PTCD3-213ENST00000480102 LRCH3Q96II8 777 aa7.46□□□□□ -1.22
PTCD3-213ENST00000480102 RPRD2Q5VT52 1461 aaKnown RBP7.46□□□□□ -1.22
PTCD3-213ENST00000480102 VWDEQ8N2E2 1590 aa7.46□□□□□ -1.22
PTCD3-213ENST00000480102 GNPATO15228 680 aa7.45□□□□□ -1.22
PTCD3-213ENST00000480102 MLECQ14165 292 aa7.45□□□□□ -1.22
PTCD3-213ENST00000480102 GGT6Q6P531 493 aa7.45□□□□□ -1.22
PTCD3-213ENST00000480102 EYA1Q99502 592 aa7.45□□□□□ -1.22
PTCD3-213ENST00000480102 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-213ENST00000480102 KANK1Q14678 1352 aa7.45□□□□□ -1.22
PTCD3-213ENST00000480102 PTPRTO14522 1441 aa7.44□□□□□ -1.22
PTCD3-213ENST00000480102 ABCC3O15438 1527 aa7.44□□□□□ -1.22
PTCD3-213ENST00000480102 SAMD7Q7Z3H4 446 aa7.44□□□□□ -1.22
PTCD3-213ENST00000480102 ADGRG1Q9Y653 693 aa7.44□□□□□ -1.22
PTCD3-213ENST00000480102 DEPDC5O75140 1603 aa7.44□□□□□ -1.22
PTCD3-213ENST00000480102 ZC3H13Q5T200 1668 aaKnown RBP7.44□□□□□ -1.22
PTCD3-213ENST00000480102 FECHP22830 423 aa7.43□□□□□ -1.22
PTCD3-213ENST00000480102 RBM46Q8TBY0 533 aaKnown RBP7.43□□□□□ -1.22
PTCD3-213ENST00000480102 RRP7BPQ9NSQ0 103 aa7.43□□□□□ -1.22
PTCD3-213ENST00000480102 SLC52A1Q9NWF4 448 aa7.43□□□□□ -1.22
PTCD3-213ENST00000480102 TNRQ92752 1358 aa7.43□□□□□ -1.22
PTCD3-213ENST00000480102 FER1L4A9Z1Z3 1794 aa7.43□□□□□ -1.22
PTCD3-213ENST00000480102 NOS1P29475 1434 aa7.43□□□□□ -1.22
PTCD3-213ENST00000480102 A2ML1A8K2U0 1454 aa7.43□□□□□ -1.22
PTCD3-213ENST00000480102 SPATA31D1Q6ZQQ2 1576 aa7.42□□□□□ -1.22
PTCD3-213ENST00000480102 MROH1Q8NDA8 1641 aa7.42□□□□□ -1.22
PTCD3-213ENST00000480102 CROCC2H7BZ55 1655 aa7.42□□□□□ -1.22
PTCD3-213ENST00000480102 HRCP23327 699 aa7.42□□□□□ -1.22
PTCD3-213ENST00000480102 CEBPAP49715 358 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-213ENST00000480102 FAM50AQ14320 339 aaKnown RBP7.42□□□□□ -1.22
PTCD3-213ENST00000480102 FAM161AQ3B820 660 aa7.42□□□□□ -1.22
PTCD3-213ENST00000480102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.42□□□□□ -1.22
PTCD3-213ENST00000480102 TSR3Q9UJK0 312 aaKnown RBP7.42□□□□□ -1.22
PTCD3-213ENST00000480102 HPS5Q9UPZ3 1129 aa7.42□□□□□ -1.22
PTCD3-213ENST00000480102 SETD1BQ9UPS6 1966 aaKnown RBP7.42□□□□□ -1.22
PTCD3-213ENST00000480102 HFM1A2PYH4 1435 aa7.42□□□□□ -1.22
PTCD3-213ENST00000480102 RIMS1Q86UR5 1692 aaKnown RBP7.41□□□□□ -1.22
PTCD3-213ENST00000480102 NYAP1Q6ZVC0 841 aa7.41□□□□□ -1.22
PTCD3-213ENST00000480102 THEMISQ8N1K5 641 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-213ENST00000480102 WBP1LQ9NX94 342 aa7.41□□□□□ -1.22
PTCD3-213ENST00000480102 ERVK-7P63135 1459 aa7.41□□□□□ -1.22
PTCD3-213ENST00000480102 PREX1Q8TCU6 1659 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms