RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CFAP69A5D8W1 941 aa6.15□□□□□ -1.42
NPHP3-206ENST00000474871 ERCC3P19447 782 aa6.15□□□□□ -1.42
NPHP3-206ENST00000474871 CDK13Q14004 1512 aaKnown RBP6.15□□□□□ -1.42
NPHP3-206ENST00000474871 NCOA2Q15596 1464 aa6.15□□□□□ -1.42
NPHP3-206ENST00000474871 SYNRGQ9UMZ2 1314 aa6.15□□□□□ -1.43
NPHP3-206ENST00000474871 TERF1P54274 439 aa6.15□□□□□ -1.43
NPHP3-206ENST00000474871 CCDC82Q8N4S0 544 aa6.15□□□□□ -1.43
NPHP3-206ENST00000474871 RNF39Q9H2S5 420 aa6.15□□□□□ -1.43
NPHP3-206ENST00000474871 MAP4K4O95819 1239 aaPredicted RBP6.14□□□□□ -1.43
NPHP3-206ENST00000474871 NUP153P49790 1475 aaKnown RBP6.14□□□□□ -1.43
NPHP3-206ENST00000474871 SHROOM2Q13796 1616 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 FSD2A1L4K1 749 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 BDNFP23560 247 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 SUN2Q9UH99 717 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.14□□□□□ -1.43
NPHP3-206ENST00000474871 LMOD3Q0VAK6 560 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 DONSONQ9NYP3 566 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 RBM27Q9P2N5 1060 aaKnown RBP6.14□□□□□ -1.43
NPHP3-206ENST00000474871 ZNF232Q9UNY5 417 aa6.14□□□□□ -1.43
NPHP3-206ENST00000474871 MTUS2Q5JR59 1369 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 ABCB7O75027 752 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 GYS2P54840 703 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 HDAC1Q13547 482 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-206ENST00000474871 FGD6Q6ZV73 1430 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 APBB1O00213 710 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 NEXNQ0ZGT2 675 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 SYNPO2Q9UMS6 1093 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 ALDH1B1P30837 517 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 LONRF3Q496Y0 759 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 GPATCH3Q96I76 525 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 MYOM3Q5VTT5 1437 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 ZKSCAN2Q63HK3 967 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 NLRP13Q86W25 1043 aa6.13□□□□□ -1.43
NPHP3-206ENST00000474871 PTPN23Q9H3S7 1636 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 SLC27A2O14975 620 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 KCNN1Q92952 543 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 EFCC1Q9HA90 598 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 ABCA8O94911 1581 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 CARMIL2Q6F5E8 1435 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 DNTTIP2Q5QJE6 756 aaKnown RBP6.12□□□□□ -1.43
NPHP3-206ENST00000474871 GZF1Q9H116 711 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-206ENST00000474871 ARIH1Q9Y4X5 557 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-206ENST00000474871 ADCY10Q96PN6 1610 aa6.12□□□□□ -1.43
NPHP3-206ENST00000474871 TCOF1Q13428 1488 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 PAX3P23760 479 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 DHX57Q6P158 1386 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 ESPNB1AK53 854 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 VASPP50552 380 aaPredicted RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 MAP9Q49MG5 647 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 SNRNP27Q8WVK2 155 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 NCAPGQ9BPX3 1015 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 PLB1Q6P1J6 1458 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 RBM6P78332 1123 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 NOL8Q76FK4 1167 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 MAP7D2Q96T17 732 aa6.11□□□□□ -1.43
NPHP3-206ENST00000474871 PNNQ9H307 717 aaKnown RBP6.11□□□□□ -1.43
NPHP3-206ENST00000474871 FAM210AQ96ND0 272 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 AGAP3Q96P47 875 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 RIMBP3CA6NJZ7 1639 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 RIMBP3BA6NNM3 1639 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 RIMBP3Q9UFD9 1639 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 SF3B2Q13435 895 aaKnown RBP6.1□□□□□ -1.43
NPHP3-206ENST00000474871 TMCO4Q5TGY1 634 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 BARGINQ6ZT62 677 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 TATDN2Q93075 761 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 PNMA2Q9UL42 364 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 CLASP1Q7Z460 1538 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 GSCP56915 257 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-206ENST00000474871 NFATC2IPQ8NCF5 419 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 MICAL1Q8TDZ2 1067 aa6.1□□□□□ -1.43
NPHP3-206ENST00000474871 SF3A1Q15459 793 aaKnown RBP6.09□□□□□ -1.43
NPHP3-206ENST00000474871 PMM1Q92871 262 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 NRDCO43847 1150 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 RAB11FIP3O75154 756 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 PTK7Q13308 1070 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 JPH4Q96JJ6 628 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 KCNH8Q96L42 1107 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 MYH16Q9H6N6 1097 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 SETD5Q9C0A6 1442 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 RAB3GAP2Q9H2M9 1393 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 GOLGA6L3A6NEY3 463 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 JMYQ8N9B5 988 aa6.09□□□□□ -1.43
NPHP3-206ENST00000474871 PRG4Q92954 1404 aaPredicted RBP6.09□□□□□ -1.43
NPHP3-206ENST00000474871 RBM26Q5T8P6 1007 aaKnown RBP6.09□□□□□ -1.44
NPHP3-206ENST00000474871 TRIM52Q96A61 297 aa6.09□□□□□ -1.44
NPHP3-206ENST00000474871 TSPYL2Q9H2G4 693 aaPredicted RBP6.09□□□□□ -1.44
NPHP3-206ENST00000474871 PDZRN3Q9UPQ7 1066 aa6.09□□□□□ -1.44
NPHP3-206ENST00000474871 RGL2O15211 777 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 TNPO1Q92973 898 aaKnown RBP6.08□□□□□ -1.44
NPHP3-206ENST00000474871 STAG3Q9UJ98 1225 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 PCDHGA4Q9Y5G9 962 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 ITSN2Q9NZM3 1697 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 ZBED9Q6R2W3 1325 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 KIF14Q15058 1648 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 NAT2P11245 290 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 IFT88Q13099 833 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 DZIP3Q86Y13 1208 aaKnown RBP6.08□□□□□ -1.44
NPHP3-206ENST00000474871 CDCA7Q9BWT1 371 aaPredicted RBP6.08□□□□□ -1.44
NPHP3-206ENST00000474871 MAPKBP1O60336 1514 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 GCC2Q8IWJ2 1684 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms