RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 NDUFB9Q9Y6M9 179 aa6.95□□□□□ -1.3
TMEM39A-206ENST00000473684 CFHP08603 1231 aa6.95□□□□□ -1.3
TMEM39A-206ENST00000473684 HMX1Q9NP08 348 aaPredicted RBP6.95□□□□□ -1.3
TMEM39A-206ENST00000473684 GRIPAP1Q4V328 841 aa6.95□□□□□ -1.3
TMEM39A-206ENST00000473684 ARAP1Q96P48 1450 aa6.94□□□□□ -1.3
TMEM39A-206ENST00000473684 POM121CA8CG34 1229 aa6.94□□□□□ -1.3
TMEM39A-206ENST00000473684 CFAP99D6REC4 459 aa6.94□□□□□ -1.3
TMEM39A-206ENST00000473684 EMP3P54852 163 aa6.94□□□□□ -1.3
TMEM39A-206ENST00000473684 TRIM34Q9BYJ4 488 aa6.94□□□□□ -1.3
TMEM39A-206ENST00000473684 IRF5Q13568 498 aa6.94□□□□□ -1.3
TMEM39A-206ENST00000473684 TAF7LQ5H9L4 462 aa6.94□□□□□ -1.3
TMEM39A-206ENST00000473684 ADAMTS12P58397 1594 aa6.94□□□□□ -1.3
TMEM39A-206ENST00000473684 A0A0U1RQG5 324 aaPredicted RBP6.93□□□□□ -1.3
TMEM39A-206ENST00000473684 GPR37L1O60883 481 aa6.93□□□□□ -1.3
TMEM39A-206ENST00000473684 HELBQ8NG08 1087 aaPredicted RBP6.93□□□□□ -1.3
TMEM39A-206ENST00000473684 NBPF3Q9H094 633 aa6.93□□□□□ -1.3
TMEM39A-206ENST00000473684 ATP6V1AP38606 617 aa6.93□□□□□ -1.3
TMEM39A-206ENST00000473684 FAM43AQ8N2R8 423 aa6.93□□□□□ -1.3
TMEM39A-206ENST00000473684 C6orf229H3BNL8 230 aa6.93□□□□□ -1.3
TMEM39A-206ENST00000473684 RRP9O43818 475 aaKnown RBP6.93□□□□□ -1.3
TMEM39A-206ENST00000473684 GLMNQ92990 594 aa6.93□□□□□ -1.3
TMEM39A-206ENST00000473684 ERICH3Q5RHP9 1530 aa6.92□□□□□ -1.3
TMEM39A-206ENST00000473684 LRRN4Q8WUT4 740 aa6.92□□□□□ -1.3
TMEM39A-206ENST00000473684 MARVELD3Q96A59 401 aa6.92□□□□□ -1.3
TMEM39A-206ENST00000473684 ZFRQ96KR1 1074 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-206ENST00000473684 CALR3Q96L12 384 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-206ENST00000473684 WRNQ14191 1432 aaPredicted RBP eCLIP6.92□□□□□ -1.3
TMEM39A-206ENST00000473684 TK2O00142 265 aa6.92□□□□□ -1.3
TMEM39A-206ENST00000473684 ABCA10Q8WWZ4 1543 aa6.91□□□□□ -1.3
TMEM39A-206ENST00000473684 LHX8Q68G74 356 aa6.91□□□□□ -1.3
TMEM39A-206ENST00000473684 RNF40O75150 1001 aa6.91□□□□□ -1.3
TMEM39A-206ENST00000473684 TSC1Q92574 1164 aa6.91□□□□□ -1.3
TMEM39A-206ENST00000473684 SYMPKQ92797 1274 aaKnown RBP6.91□□□□□ -1.3
TMEM39A-206ENST00000473684 SYNJ2O15056 1496 aa6.9□□□□□ -1.3
TMEM39A-206ENST00000473684 FAM205CA6NFA0 338 aa6.9□□□□□ -1.3
TMEM39A-206ENST00000473684 KMT5BQ4FZB7 885 aa6.9□□□□□ -1.3
TMEM39A-206ENST00000473684 IPO9Q96P70 1041 aaKnown RBP6.9□□□□□ -1.3
TMEM39A-206ENST00000473684 WASHC4Q2M389 1173 aa6.9□□□□□ -1.31
TMEM39A-206ENST00000473684 MORN1Q5T089 497 aa6.9□□□□□ -1.31
TMEM39A-206ENST00000473684 PRR7Q8TB68 274 aa6.89□□□□□ -1.31
TMEM39A-206ENST00000473684 CUL7Q14999 1698 aa6.89□□□□□ -1.31
TMEM39A-206ENST00000473684 POTEB3A0JP26 581 aa6.89□□□□□ -1.31
TMEM39A-206ENST00000473684 ANP32AP39687 249 aaKnown RBP6.89□□□□□ -1.31
TMEM39A-206ENST00000473684 POTEBQ6S5H4 581 aa6.89□□□□□ -1.31
TMEM39A-206ENST00000473684 MRPL50Q8N5N7 158 aaKnown RBP6.89□□□□□ -1.31
TMEM39A-206ENST00000473684 ADAMTS19Q8TE59 1207 aa6.89□□□□□ -1.31
TMEM39A-206ENST00000473684 EPS8L1Q8TE68 723 aa6.89□□□□□ -1.31
TMEM39A-206ENST00000473684 ACTN4O43707 911 aaKnown RBP6.88□□□□□ -1.31
TMEM39A-206ENST00000473684 HSP90AA2PQ14568 343 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-206ENST00000473684 NUP160Q12769 1436 aa6.88□□□□□ -1.31
TMEM39A-206ENST00000473684 NEFMP07197 916 aa6.88□□□□□ -1.31
TMEM39A-206ENST00000473684 NECTIN2Q92692 538 aa6.88□□□□□ -1.31
TMEM39A-206ENST00000473684 HDGFL1Q5TGJ6 251 aa6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 RETREG3Q86VR2 466 aa6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 LRCH3Q96II8 777 aa6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 HS3ST6Q96QI5 342 aa6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 TRAIPQ9BWF2 469 aa6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 BRPF3Q9ULD4 1205 aa6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 SLC27A5Q9Y2P5 690 aa6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 TOP2BQ02880 1626 aa6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 PUS10Q3MIT2 529 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 DESI1Q6ICB0 168 aa6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 ADGRD1Q6QNK2 874 aa6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.87□□□□□ -1.31
TMEM39A-206ENST00000473684 GRIN2BQ13224 1484 aa6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 HRO43593 1189 aa6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 PPP1R15AO75807 674 aaPredicted RBP6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 VAC14Q08AM6 782 aa6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 Q3C1V9 767 aa6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 ZNF326Q5BKZ1 582 aaKnown RBP6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 PPRC1Q5VV67 1664 aaKnown RBP6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 LSM11P83369 360 aaKnown RBP eCLIP6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 NR6A1Q15406 480 aa6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 PPP4R2Q9NY27 417 aa6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 POLA1P09884 1462 aaPredicted RBP6.86□□□□□ -1.31
TMEM39A-206ENST00000473684 RUSC2Q8N2Y8 1516 aa6.85□□□□□ -1.31
TMEM39A-206ENST00000473684 PPM1GO15355 546 aaPredicted RBP6.85□□□□□ -1.31
TMEM39A-206ENST00000473684 RETREG2Q8NC44 543 aa6.85□□□□□ -1.31
TMEM39A-206ENST00000473684 ALG2Q9H553 416 aa6.85□□□□□ -1.31
TMEM39A-206ENST00000473684 CCDC88BA6NC98 1476 aa6.85□□□□□ -1.31
TMEM39A-206ENST00000473684 PRR14Q9BWN1 585 aa6.84□□□□□ -1.31
TMEM39A-206ENST00000473684 ERCC6L2Q5T890 1561 aa6.84□□□□□ -1.31
TMEM39A-206ENST00000473684 KIAA0586Q9BVV6 1533 aa6.83□□□□□ -1.32
TMEM39A-206ENST00000473684 MAP3K4Q9Y6R4 1608 aa6.83□□□□□ -1.32
TMEM39A-206ENST00000473684 LYPD8Q6UX82 237 aa6.83□□□□□ -1.32
TMEM39A-206ENST00000473684 ZBTB7CA1YPR0 619 aa6.83□□□□□ -1.32
TMEM39A-206ENST00000473684 HSP90AA1P07900 732 aaKnown RBP6.83□□□□□ -1.32
TMEM39A-206ENST00000473684 CFAP70Q5T0N1 1121 aa6.83□□□□□ -1.32
TMEM39A-206ENST00000473684 BLOC1S3Q6QNY0 202 aa6.83□□□□□ -1.32
TMEM39A-206ENST00000473684 RNF19BQ6ZMZ0 732 aa6.83□□□□□ -1.32
TMEM39A-206ENST00000473684 DIP2BQ9P265 1576 aa6.83□□□□□ -1.32
TMEM39A-206ENST00000473684 CENPJQ9HC77 1338 aaPredicted RBP6.83□□□□□ -1.32
TMEM39A-206ENST00000473684 SOWAHBA6NEL2 793 aa6.82□□□□□ -1.32
TMEM39A-206ENST00000473684 CCER2I3L3R5 266 aa6.82□□□□□ -1.32
TMEM39A-206ENST00000473684 CALD1Q05682 793 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-206ENST00000473684 BRICD5Q6PL45 260 aa6.82□□□□□ -1.32
TMEM39A-206ENST00000473684 FAM163AQ96GL9 167 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-206ENST00000473684 APLP1P51693 650 aa6.82□□□□□ -1.32
TMEM39A-206ENST00000473684 ANKK1Q8NFD2 765 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms