RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 ANKLE2Q86XL3 938 aa9.63□□□□□ -0.87
VAMP3-202ENST00000470357 MPHOSPH9Q99550 1183 aa9.63□□□□□ -0.87
VAMP3-202ENST00000470357 PRDM15P57071 1507 aaPredicted RBP9.62□□□□□ -0.87
VAMP3-202ENST00000470357 FAM135AQ9P2D6 1515 aa9.62□□□□□ -0.87
VAMP3-202ENST00000470357 PZPP20742 1482 aa9.62□□□□□ -0.87
VAMP3-202ENST00000470357 DPYSL4O14531 572 aa9.62□□□□□ -0.87
VAMP3-202ENST00000470357 THEMISQ8N1K5 641 aaPredicted RBP9.62□□□□□ -0.87
VAMP3-202ENST00000470357 LHX6Q9UPM6 363 aa9.62□□□□□ -0.87
VAMP3-202ENST00000470357 NPHP4O75161 1426 aaPredicted RBP9.62□□□□□ -0.87
VAMP3-202ENST00000470357 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
VAMP3-202ENST00000470357 ZNF316A6NFI3 1004 aaPredicted RBP9.61□□□□□ -0.87
VAMP3-202ENST00000470357 HS3ST6Q96QI5 342 aa9.61□□□□□ -0.87
VAMP3-202ENST00000470357 TET3O43151 1660 aa9.61□□□□□ -0.87
VAMP3-202ENST00000470357 ZC3H13Q5T200 1668 aaKnown RBP9.61□□□□□ -0.87
VAMP3-202ENST00000470357 STRCP1A6NGW2 1772 aa9.6□□□□□ -0.87
VAMP3-202ENST00000470357 KIF3BO15066 747 aa9.6□□□□□ -0.87
VAMP3-202ENST00000470357 EVI5O60447 810 aa9.6□□□□□ -0.87
VAMP3-202ENST00000470357 VARS2Q5ST30 1063 aaKnown RBP9.6□□□□□ -0.87
VAMP3-202ENST00000470357 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
VAMP3-202ENST00000470357 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
VAMP3-202ENST00000470357 NLRP1Q9C000 1473 aa9.59□□□□□ -0.87
VAMP3-202ENST00000470357 UGGT1Q9NYU2 1555 aa9.58□□□□□ -0.88
VAMP3-202ENST00000470357 MROH1Q8NDA8 1641 aa9.58□□□□□ -0.88
VAMP3-202ENST00000470357 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
VAMP3-202ENST00000470357 WASHC2CQ9Y4E1 1318 aa9.57□□□□□ -0.88
VAMP3-202ENST00000470357 LMTK2Q8IWU2 1503 aa9.57□□□□□ -0.88
VAMP3-202ENST00000470357 POTEAQ6S8J7 498 aa9.57□□□□□ -0.88
VAMP3-202ENST00000470357 CEP152O94986 1710 aa9.56□□□□□ -0.88
VAMP3-202ENST00000470357 RPRD2Q5VT52 1461 aaKnown RBP9.56□□□□□ -0.88
VAMP3-202ENST00000470357 ANKRD30BQ9BXX2 1392 aa9.56□□□□□ -0.88
VAMP3-202ENST00000470357 CDAN1Q8IWY9 1227 aa9.56□□□□□ -0.88
VAMP3-202ENST00000470357 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
VAMP3-202ENST00000470357 E9PCH4 1651 aa9.55□□□□□ -0.88
VAMP3-202ENST00000470357 IQGAP1P46940 1657 aa9.55□□□□□ -0.88
VAMP3-202ENST00000470357 SPHKAPQ2M3C7 1700 aa9.55□□□□□ -0.88
VAMP3-202ENST00000470357 EFCAB6Q5THR3 1501 aa9.55□□□□□ -0.88
VAMP3-202ENST00000470357 ARIH1Q9Y4X5 557 aaPredicted RBP9.54□□□□□ -0.88
VAMP3-202ENST00000470357 SYNMO15061 1565 aa9.54□□□□□ -0.88
VAMP3-202ENST00000470357 TONSLQ96HA7 1378 aa9.53□□□□□ -0.88
VAMP3-202ENST00000470357 ABCC3O15438 1527 aa9.53□□□□□ -0.88
VAMP3-202ENST00000470357 LTKP29376 864 aa9.53□□□□□ -0.88
VAMP3-202ENST00000470357 FAM135BQ49AJ0 1406 aa9.53□□□□□ -0.88
VAMP3-202ENST00000470357 ARHGEF1Q92888 912 aaKnown RBP9.52□□□□□ -0.89
VAMP3-202ENST00000470357 TRPM2O94759 1503 aa9.51□□□□□ -0.89
VAMP3-202ENST00000470357 CCDC144AA2RUR9 1427 aa9.51□□□□□ -0.89
VAMP3-202ENST00000470357 ARHGAP31Q2M1Z3 1444 aa9.51□□□□□ -0.89
VAMP3-202ENST00000470357 NEUROD1Q13562 356 aa9.51□□□□□ -0.89
VAMP3-202ENST00000470357 ZNF687Q8N1G0 1237 aa9.51□□□□□ -0.89
VAMP3-202ENST00000470357 ZNF454Q8N9F8 522 aa9.51□□□□□ -0.89
VAMP3-202ENST00000470357 ERVK-7P63135 1459 aa9.51□□□□□ -0.89
VAMP3-202ENST00000470357 XIRP1Q702N8 1843 aaKnown RBP9.51□□□□□ -0.89
VAMP3-202ENST00000470357 KIF1BO60333 1816 aa9.5□□□□□ -0.89
VAMP3-202ENST00000470357 PSDA5PKW4 1024 aaPredicted RBP9.5□□□□□ -0.89
VAMP3-202ENST00000470357 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
VAMP3-202ENST00000470357 PDIA6Q15084 440 aa9.5□□□□□ -0.89
VAMP3-202ENST00000470357 SIN3AQ96ST3 1273 aa9.5□□□□□ -0.89
VAMP3-202ENST00000470357 ARHGAP23Q9P227 1491 aa9.5□□□□□ -0.89
VAMP3-202ENST00000470357 CFAP65Q6ZU64 1925 aaKnown RBP9.5□□□□□ -0.89
VAMP3-202ENST00000470357 SCAF11Q99590 1463 aaKnown RBP9.49□□□□□ -0.89
VAMP3-202ENST00000470357 FOSBP53539 338 aa9.49□□□□□ -0.89
VAMP3-202ENST00000470357 SLIT1O75093 1534 aa9.49□□□□□ -0.89
VAMP3-202ENST00000470357 UBR1Q8IWV7 1749 aa9.48□□□□□ -0.89
VAMP3-202ENST00000470357 PPP4R3BQ5MIZ7 849 aa9.48□□□□□ -0.89
VAMP3-202ENST00000470357 TXNDC2Q86VQ3 553 aa9.48□□□□□ -0.89
VAMP3-202ENST00000470357 DDX12PQ92771 950 aa9.48□□□□□ -0.89
VAMP3-202ENST00000470357 PCDH10Q9P2E7 1040 aa9.48□□□□□ -0.89
VAMP3-202ENST00000470357 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
VAMP3-202ENST00000470357 SRCAPQ6ZRS2 3230 aa9.46□□□□□ -0.89
VAMP3-202ENST00000470357 PTGER2P43116 358 aa9.46□□□□□ -0.9
VAMP3-202ENST00000470357 STAC3Q96MF2 364 aa9.46□□□□□ -0.9
VAMP3-202ENST00000470357 TMEM94Q12767 1356 aa9.46□□□□□ -0.9
VAMP3-202ENST00000470357 CLTCL1P53675 1640 aa9.45□□□□□ -0.9
VAMP3-202ENST00000470357 POTEEQ6S8J3 1075 aa9.45□□□□□ -0.9
VAMP3-202ENST00000470357 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
VAMP3-202ENST00000470357 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
VAMP3-202ENST00000470357 AXIN2Q9Y2T1 843 aa9.45□□□□□ -0.9
VAMP3-202ENST00000470357 NOS1P29475 1434 aa9.45□□□□□ -0.9
VAMP3-202ENST00000470357 GRXCR2A6NFK2 248 aa9.44□□□□□ -0.9
VAMP3-202ENST00000470357 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
VAMP3-202ENST00000470357 PHF14O94880 888 aa9.44□□□□□ -0.9
VAMP3-202ENST00000470357 KCNA6P17658 529 aa9.44□□□□□ -0.9
VAMP3-202ENST00000470357 ZDHHC16Q969W1 377 aa9.44□□□□□ -0.9
VAMP3-202ENST00000470357 RBM33Q96EV2 1170 aaKnown RBP9.44□□□□□ -0.9
VAMP3-202ENST00000470357 TMEM2Q9UHN6 1383 aa9.44□□□□□ -0.9
VAMP3-202ENST00000470357 PIK3C2BO00750 1634 aa9.44□□□□□ -0.9
VAMP3-202ENST00000470357 SETD1AO15047 1707 aaKnown RBP9.43□□□□□ -0.9
VAMP3-202ENST00000470357 ROBO1Q9Y6N7 1651 aa9.43□□□□□ -0.9
VAMP3-202ENST00000470357 TYW1BQ6NUM6 668 aa9.42□□□□□ -0.9
VAMP3-202ENST00000470357 L3MBTL2Q969R5 705 aa9.42□□□□□ -0.9
VAMP3-202ENST00000470357 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
VAMP3-202ENST00000470357 SLC52A1Q9NWF4 448 aa9.42□□□□□ -0.9
VAMP3-202ENST00000470357 EID1Q9Y6B2 187 aa9.42□□□□□ -0.9
VAMP3-202ENST00000470357 SPATA31E1Q6ZUB1 1445 aa9.41□□□□□ -0.9
VAMP3-202ENST00000470357 ARHGAP33O14559 1287 aa9.41□□□□□ -0.9
VAMP3-202ENST00000470357 PSEN2P49810 448 aa9.41□□□□□ -0.9
VAMP3-202ENST00000470357 PROSER2Q86WR7 435 aaPredicted RBP9.41□□□□□ -0.9
VAMP3-202ENST00000470357 EPAS1Q99814 870 aa9.41□□□□□ -0.9
VAMP3-202ENST00000470357 KDM5AP29375 1690 aaKnown RBP9.41□□□□□ -0.9
VAMP3-202ENST00000470357 JCADQ9P266 1359 aa9.4□□□□□ -0.9
VAMP3-202ENST00000470357 SEMA3EO15041 775 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms