RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 ZFRQ96KR1 1074 aaKnown RBP7.86□□□□□ -1.15
SF3A3-202ENST00000460925 HMX1Q9NP08 348 aaPredicted RBP7.86□□□□□ -1.15
SF3A3-202ENST00000460925 ACTN4O43707 911 aaKnown RBP7.85□□□□□ -1.15
SF3A3-202ENST00000460925 KMT5BQ4FZB7 885 aa7.85□□□□□ -1.15
SF3A3-202ENST00000460925 GLMNQ92990 594 aa7.85□□□□□ -1.15
SF3A3-202ENST00000460925 CALR3Q96L12 384 aaKnown RBP7.85□□□□□ -1.15
SF3A3-202ENST00000460925 PODXL2Q9NZ53 605 aa7.85□□□□□ -1.15
SF3A3-202ENST00000460925 POM121CA8CG34 1229 aa7.84□□□□□ -1.15
SF3A3-202ENST00000460925 C6orf229H3BNL8 230 aa7.84□□□□□ -1.15
SF3A3-202ENST00000460925 PPP1R15AO75807 674 aaPredicted RBP7.84□□□□□ -1.15
SF3A3-202ENST00000460925 RANGAP1P46060 587 aaPredicted RBP7.84□□□□□ -1.15
SF3A3-202ENST00000460925 MORN1Q5T089 497 aa7.84□□□□□ -1.15
SF3A3-202ENST00000460925 LHX8Q68G74 356 aa7.84□□□□□ -1.15
SF3A3-202ENST00000460925 DESI1Q6ICB0 168 aa7.84□□□□□ -1.15
SF3A3-202ENST00000460925 NUP160Q12769 1436 aa7.84□□□□□ -1.15
SF3A3-202ENST00000460925 CLASP1Q7Z460 1538 aa7.83□□□□□ -1.16
SF3A3-202ENST00000460925 RETREG3Q86VR2 466 aa7.83□□□□□ -1.16
SF3A3-202ENST00000460925 LRRN4Q8WUT4 740 aa7.83□□□□□ -1.16
SF3A3-202ENST00000460925 TRAIPQ9BWF2 469 aa7.83□□□□□ -1.16
SF3A3-202ENST00000460925 IQGAP2Q13576 1575 aa7.83□□□□□ -1.16
SF3A3-202ENST00000460925 Q3C1V9 767 aa7.82□□□□□ -1.16
SF3A3-202ENST00000460925 MRPL50Q8N5N7 158 aaKnown RBP7.82□□□□□ -1.16
SF3A3-202ENST00000460925 PRR14Q9BWN1 585 aa7.82□□□□□ -1.16
SF3A3-202ENST00000460925 ERCC6L2Q5T890 1561 aa7.81□□□□□ -1.16
SF3A3-202ENST00000460925 FAM205CA6NFA0 338 aa7.81□□□□□ -1.16
SF3A3-202ENST00000460925 PRR7Q8TB68 274 aa7.81□□□□□ -1.16
SF3A3-202ENST00000460925 MARVELD3Q96A59 401 aa7.81□□□□□ -1.16
SF3A3-202ENST00000460925 LRCH3Q96II8 777 aa7.81□□□□□ -1.16
SF3A3-202ENST00000460925 SALL2Q9Y467 1007 aaPredicted RBP7.81□□□□□ -1.16
SF3A3-202ENST00000460925 HRO43593 1189 aa7.8□□□□□ -1.16
SF3A3-202ENST00000460925 ADGRD1Q6QNK2 874 aa7.8□□□□□ -1.16
SF3A3-202ENST00000460925 ADAMTS19Q8TE59 1207 aa7.8□□□□□ -1.16
SF3A3-202ENST00000460925 SLC27A5Q9Y2P5 690 aa7.8□□□□□ -1.16
SF3A3-202ENST00000460925 SHROOM2Q13796 1616 aa7.79□□□□□ -1.16
SF3A3-202ENST00000460925 POTEB3A0JP26 581 aa7.79□□□□□ -1.16
SF3A3-202ENST00000460925 SOX11P35716 441 aa7.79□□□□□ -1.16
SF3A3-202ENST00000460925 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
SF3A3-202ENST00000460925 HDGFL1Q5TGJ6 251 aa7.79□□□□□ -1.16
SF3A3-202ENST00000460925 POTEBQ6S5H4 581 aa7.79□□□□□ -1.16
SF3A3-202ENST00000460925 TSC1Q92574 1164 aa7.79□□□□□ -1.16
SF3A3-202ENST00000460925 SYMPKQ92797 1274 aaKnown RBP7.79□□□□□ -1.16
SF3A3-202ENST00000460925 HS3ST6Q96QI5 342 aa7.79□□□□□ -1.16
SF3A3-202ENST00000460925 ALG2Q9H553 416 aa7.79□□□□□ -1.16
SF3A3-202ENST00000460925 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-202ENST00000460925 KIAA0586Q9BVV6 1533 aa7.78□□□□□ -1.16
SF3A3-202ENST00000460925 RNF40O75150 1001 aa7.78□□□□□ -1.16
SF3A3-202ENST00000460925 EPS8L1Q8TE68 723 aa7.78□□□□□ -1.16
SF3A3-202ENST00000460925 CEP162Q5TB80 1403 aa7.78□□□□□ -1.16
SF3A3-202ENST00000460925 TNIKQ9UKE5 1360 aa7.77□□□□□ -1.17
SF3A3-202ENST00000460925 LYPD8Q6UX82 237 aa7.77□□□□□ -1.17
SF3A3-202ENST00000460925 KIAA0556O60303 1618 aa7.77□□□□□ -1.17
SF3A3-202ENST00000460925 SAMD9Q5K651 1589 aa7.76□□□□□ -1.17
SF3A3-202ENST00000460925 ZBTB7CA1YPR0 619 aa7.76□□□□□ -1.17
SF3A3-202ENST00000460925 PER1O15534 1290 aaPredicted RBP7.76□□□□□ -1.17
SF3A3-202ENST00000460925 VAC14Q08AM6 782 aa7.76□□□□□ -1.17
SF3A3-202ENST00000460925 BRICD5Q6PL45 260 aa7.76□□□□□ -1.17
SF3A3-202ENST00000460925 PBXIP1Q96AQ6 731 aa7.76□□□□□ -1.17
SF3A3-202ENST00000460925 DISP1Q96F81 1524 aa7.76□□□□□ -1.17
SF3A3-202ENST00000460925 UGGT2Q9NYU1 1516 aa7.76□□□□□ -1.17
SF3A3-202ENST00000460925 ARHGAP35Q9NRY4 1499 aa7.75□□□□□ -1.17
SF3A3-202ENST00000460925 SOWAHBA6NEL2 793 aa7.75□□□□□ -1.17
SF3A3-202ENST00000460925 SRPK2P78362 688 aaKnown RBP7.75□□□□□ -1.17
SF3A3-202ENST00000460925 PDE4CQ08493 712 aa7.75□□□□□ -1.17
SF3A3-202ENST00000460925 NR6A1Q15406 480 aa7.75□□□□□ -1.17
SF3A3-202ENST00000460925 PUS10Q3MIT2 529 aaKnown RBP7.75□□□□□ -1.17
SF3A3-202ENST00000460925 KCTD17Q8N5Z5 321 aa7.75□□□□□ -1.17
SF3A3-202ENST00000460925 RETREG2Q8NC44 543 aa7.75□□□□□ -1.17
SF3A3-202ENST00000460925 PNMA1Q8ND90 353 aa7.75□□□□□ -1.17
SF3A3-202ENST00000460925 ANKK1Q8NFD2 765 aa7.75□□□□□ -1.17
SF3A3-202ENST00000460925 FHOD3Q2V2M9 1422 aa7.75□□□□□ -1.17
SF3A3-202ENST00000460925 ARAP1Q96P48 1450 aa7.75□□□□□ -1.17
SF3A3-202ENST00000460925 RIMBP3CA6NJZ7 1639 aa7.74□□□□□ -1.17
SF3A3-202ENST00000460925 RIMBP3BA6NNM3 1639 aa7.74□□□□□ -1.17
SF3A3-202ENST00000460925 RIMBP3Q9UFD9 1639 aa7.74□□□□□ -1.17
SF3A3-202ENST00000460925 CFAP70Q5T0N1 1121 aa7.74□□□□□ -1.17
SF3A3-202ENST00000460925 USB1Q9BQ65 265 aaKnown RBP7.74□□□□□ -1.17
SF3A3-202ENST00000460925 PPP1R12CQ9BZL4 782 aa7.74□□□□□ -1.17
SF3A3-202ENST00000460925 CLIP1P30622 1438 aa7.74□□□□□ -1.17
SF3A3-202ENST00000460925 PRG4Q92954 1404 aaPredicted RBP7.74□□□□□ -1.17
SF3A3-202ENST00000460925 ACIN1Q9UKV3 1341 aaKnown RBP7.74□□□□□ -1.17
SF3A3-202ENST00000460925 PPP4CP60510 307 aa7.73□□□□□ -1.17
SF3A3-202ENST00000460925 BLOC1S3Q6QNY0 202 aa7.73□□□□□ -1.17
SF3A3-202ENST00000460925 RNF19BQ6ZMZ0 732 aa7.73□□□□□ -1.17
SF3A3-202ENST00000460925 THAP11Q96EK4 314 aa7.73□□□□□ -1.17
SF3A3-202ENST00000460925 TSR3Q9UJK0 312 aaKnown RBP7.73□□□□□ -1.17
SF3A3-202ENST00000460925 ARHGEF11O15085 1522 aa7.73□□□□□ -1.17
SF3A3-202ENST00000460925 APLP1P51693 650 aa7.72□□□□□ -1.17
SF3A3-202ENST00000460925 SCUBE3Q8IX30 993 aa7.72□□□□□ -1.17
SF3A3-202ENST00000460925 ZC3H4Q9UPT8 1303 aaKnown RBP7.72□□□□□ -1.17
SF3A3-202ENST00000460925 EFCAB5A4FU69 1503 aa7.72□□□□□ -1.17
SF3A3-202ENST00000460925 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-202ENST00000460925 NR1I2O75469 434 aa7.71□□□□□ -1.18
SF3A3-202ENST00000460925 FMNL1O95466 1100 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-202ENST00000460925 F12P00748 615 aaPredicted RBP7.71□□□□□ -1.18
SF3A3-202ENST00000460925 UCN2Q96RP3 112 aa7.71□□□□□ -1.18
SF3A3-202ENST00000460925 LRRIQ1Q96JM4 1722 aa7.71□□□□□ -1.18
SF3A3-202ENST00000460925 PCF11O94913 1555 aaKnown RBP7.71□□□□□ -1.18
SF3A3-202ENST00000460925 GOLGA8CPA6NN73 597 aa7.7□□□□□ -1.18
SF3A3-202ENST00000460925 EIF4G2P78344 907 aaKnown RBP eCLIP7.7□□□□□ -1.18
SF3A3-202ENST00000460925 NR1H3Q13133 447 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms