RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PRR36Q9H6K5 1346 aa15.29■□□□□ 0.04
VTA1-203ENST00000452973 SOX12O15370 315 aa15.29■□□□□ 0.04
VTA1-203ENST00000452973 ADAMTS13Q76LX8 1427 aa15.29■□□□□ 0.04
VTA1-203ENST00000452973 AMOTL2Q9Y2J4 779 aa15.29■□□□□ 0.04
VTA1-203ENST00000452973 TMPOP42166 694 aaKnown RBP15.28■□□□□ 0.04
VTA1-203ENST00000452973 WDR63Q8IWG1 891 aa15.28■□□□□ 0.04
VTA1-203ENST00000452973 COG3Q96JB2 828 aa15.28■□□□□ 0.04
VTA1-203ENST00000452973 RIPK4P57078 832 aa15.28■□□□□ 0.04
VTA1-203ENST00000452973 PANK1Q8TE04 598 aa15.28■□□□□ 0.04
VTA1-203ENST00000452973 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
VTA1-203ENST00000452973 THEMISQ8N1K5 641 aaPredicted RBP15.27■□□□□ 0.03
VTA1-203ENST00000452973 ATP7BP35670 1465 aa15.27■□□□□ 0.03
VTA1-203ENST00000452973 IQSEC2Q5JU85 1478 aa15.27■□□□□ 0.03
VTA1-203ENST00000452973 PMFBP1Q8TBY8 1022 aa15.26■□□□□ 0.03
VTA1-203ENST00000452973 PHF23Q9BUL5 403 aaPredicted RBP15.26■□□□□ 0.03
VTA1-203ENST00000452973 PLEKHG1Q9ULL1 1385 aa15.26■□□□□ 0.03
VTA1-203ENST00000452973 FAM135BQ49AJ0 1406 aa15.26■□□□□ 0.03
VTA1-203ENST00000452973 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
VTA1-203ENST00000452973 MYH16Q9H6N6 1097 aa15.26■□□□□ 0.03
VTA1-203ENST00000452973 COG6Q9Y2V7 657 aa15.26■□□□□ 0.03
VTA1-203ENST00000452973 CLUAP1Q96AJ1 413 aa15.25■□□□□ 0.03
VTA1-203ENST00000452973 NEFMP07197 916 aa15.25■□□□□ 0.03
VTA1-203ENST00000452973 RARSP54136 660 aaKnown RBP15.25■□□□□ 0.03
VTA1-203ENST00000452973 CCDC27Q2M243 656 aa15.25■□□□□ 0.03
VTA1-203ENST00000452973 SIRT1Q96EB6 747 aa15.25■□□□□ 0.03
VTA1-203ENST00000452973 LAS1LQ9Y4W2 734 aaKnown RBP15.25■□□□□ 0.03
VTA1-203ENST00000452973 MED14O60244 1454 aa15.25■□□□□ 0.03
VTA1-203ENST00000452973 CPSF1Q10570 1443 aaKnown RBP15.25■□□□□ 0.03
VTA1-203ENST00000452973 EDC4Q6P2E9 1401 aaKnown RBP15.25■□□□□ 0.03
VTA1-203ENST00000452973 MSH5O43196 834 aa15.24■□□□□ 0.03
VTA1-203ENST00000452973 TRIM35Q9UPQ4 493 aa15.24■□□□□ 0.03
VTA1-203ENST00000452973 ACEP12821 1306 aa15.24■□□□□ 0.03
VTA1-203ENST00000452973 TNNQ9UQP3 1299 aa15.24■□□□□ 0.03
VTA1-203ENST00000452973 COL3A1P02461 1466 aaPredicted RBP15.24■□□□□ 0.03
VTA1-203ENST00000452973 TECPR2O15040 1411 aa15.24■□□□□ 0.03
VTA1-203ENST00000452973 C3P01024 1663 aa15.23■□□□□ 0.03
VTA1-203ENST00000452973 ZNF692Q9BU19 519 aaPredicted RBP15.23■□□□□ 0.03
VTA1-203ENST00000452973 PTPRUQ92729 1446 aa15.23■□□□□ 0.03
VTA1-203ENST00000452973 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
VTA1-203ENST00000452973 FANCIQ9NVI1 1328 aa15.22■□□□□ 0.03
VTA1-203ENST00000452973 EXOSC9Q06265 439 aaKnown RBP15.22■□□□□ 0.03
VTA1-203ENST00000452973 RBM33Q96EV2 1170 aaKnown RBP15.22■□□□□ 0.03
VTA1-203ENST00000452973 PHACTR3Q96KR7 559 aa15.22■□□□□ 0.03
VTA1-203ENST00000452973 CPS1P31327 1500 aa15.22■□□□□ 0.03
VTA1-203ENST00000452973 NPM2Q86SE8 214 aaKnown RBP15.22■□□□□ 0.03
VTA1-203ENST00000452973 PNPLA6Q8IY17 1366 aa15.22■□□□□ 0.03
VTA1-203ENST00000452973 ANKRD26Q9UPS8 1709 aa15.21■□□□□ 0.03
VTA1-203ENST00000452973 TCERG1O14776 1098 aaKnown RBP15.21■□□□□ 0.03
VTA1-203ENST00000452973 FCHSD2O94868 740 aa15.21■□□□□ 0.03
VTA1-203ENST00000452973 PNNQ9H307 717 aaKnown RBP15.21■□□□□ 0.03
VTA1-203ENST00000452973 THUMPD2Q9BTF0 503 aaKnown RBP15.21■□□□□ 0.03
VTA1-203ENST00000452973 FER1L4A9Z1Z3 1794 aa15.21■□□□□ 0.03
VTA1-203ENST00000452973 RSPH6AQ9H0K4 717 aa15.2■□□□□ 0.02
VTA1-203ENST00000452973 TBX22Q9Y458 520 aa15.2■□□□□ 0.02
VTA1-203ENST00000452973 NGDNQ8NEJ9 315 aaKnown RBP15.2■□□□□ 0.02
VTA1-203ENST00000452973 MAP2P11137 1827 aaKnown RBP15.19■□□□□ 0.02
VTA1-203ENST00000452973 TTC21BQ7Z4L5 1316 aa15.19■□□□□ 0.02
VTA1-203ENST00000452973 RGS3P49796 1198 aa15.19■□□□□ 0.02
VTA1-203ENST00000452973 CENPQQ7L2Z9 268 aaPredicted RBP15.19■□□□□ 0.02
VTA1-203ENST00000452973 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.19■□□□□ 0.02
VTA1-203ENST00000452973 RLBP1P12271 317 aa15.18■□□□□ 0.02
VTA1-203ENST00000452973 KCNA6P17658 529 aa15.18■□□□□ 0.02
VTA1-203ENST00000452973 PDE3AQ14432 1141 aa15.18■□□□□ 0.02
VTA1-203ENST00000452973 ERICH6Q7L0X2 663 aa15.18■□□□□ 0.02
VTA1-203ENST00000452973 PDE4AP27815 886 aa15.18■□□□□ 0.02
VTA1-203ENST00000452973 IL13P35225 146 aa15.18■□□□□ 0.02
VTA1-203ENST00000452973 SMC4Q9NTJ3 1288 aa15.18■□□□□ 0.02
VTA1-203ENST00000452973 CDC42BPGQ6DT37 1551 aa15.18■□□□□ 0.02
VTA1-203ENST00000452973 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
VTA1-203ENST00000452973 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
VTA1-203ENST00000452973 NUTM2GQ5VZR2 741 aa15.16■□□□□ 0.02
VTA1-203ENST00000452973 ADGRB2O60241 1585 aa15.16■□□□□ 0.02
VTA1-203ENST00000452973 IGHDP01880 384 aa15.16■□□□□ 0.02
VTA1-203ENST00000452973 PLEKHG3A1L390 1219 aa15.15■□□□□ 0.02
VTA1-203ENST00000452973 FTSJ3Q8IY81 847 aaKnown RBP15.15■□□□□ 0.02
VTA1-203ENST00000452973 LRRC7Q96NW7 1537 aa15.15■□□□□ 0.02
VTA1-203ENST00000452973 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
VTA1-203ENST00000452973 ANP32AP39687 249 aaKnown RBP15.15■□□□□ 0.02
VTA1-203ENST00000452973 SSH1Q8WYL5 1049 aa15.14■□□□□ 0.01
VTA1-203ENST00000452973 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
VTA1-203ENST00000452973 HSP90AB2PQ58FF8 381 aa15.14■□□□□ 0.01
VTA1-203ENST00000452973 AEBP1Q8IUX7 1158 aa15.14■□□□□ 0.01
VTA1-203ENST00000452973 FAM83GA6ND36 823 aa15.14■□□□□ 0.01
VTA1-203ENST00000452973 SLIT1O75093 1534 aa15.14■□□□□ 0.01
VTA1-203ENST00000452973 ARHGAP23Q9P227 1491 aa15.13■□□□□ 0.01
VTA1-203ENST00000452973 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
VTA1-203ENST00000452973 C14orf37Q86TY3 774 aa15.13■□□□□ 0.01
VTA1-203ENST00000452973 ANP32EQ9BTT0 268 aa15.13■□□□□ 0.01
VTA1-203ENST00000452973 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
VTA1-203ENST00000452973 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
VTA1-203ENST00000452973 SULT6B1Q6IMI4 303 aa15.13■□□□□ 0.01
VTA1-203ENST00000452973 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
VTA1-203ENST00000452973 ZKSCAN2Q63HK3 967 aa15.12■□□□□ 0.01
VTA1-203ENST00000452973 AATKQ6ZMQ8 1374 aa15.12■□□□□ 0.01
VTA1-203ENST00000452973 ITSN1Q15811 1721 aa15.12■□□□□ 0.01
VTA1-203ENST00000452973 USP6P35125 1406 aa15.12■□□□□ 0.01
VTA1-203ENST00000452973 EIF4A2Q14240 407 aaKnown RBP15.12■□□□□ 0.01
VTA1-203ENST00000452973 ANKLE2Q86XL3 938 aa15.12■□□□□ 0.01
VTA1-203ENST00000452973 BACH2Q9BYV9 841 aa15.12■□□□□ 0.01
VTA1-203ENST00000452973 MS4A1P11836 297 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms