RNA–Protein interactions for RNA: ENST00000446561.1

SEC23IP-203, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-203ENST00000446561 KIDINS220Q9ULH0 1771 aa9.4□□□□□ -0.9
SEC23IP-203ENST00000446561 ZNF428Q96B54 188 aa9.4□□□□□ -0.9
SEC23IP-203ENST00000446561 U3KPZ7 1027 aaPredicted RBP9.4□□□□□ -0.9
SEC23IP-203ENST00000446561 ERCC6L2Q5T890 1561 aa9.4□□□□□ -0.9
SEC23IP-203ENST00000446561 EVC2Q86UK5 1308 aa9.39□□□□□ -0.91
SEC23IP-203ENST00000446561 ADGRF5Q8IZF2 1346 aa9.39□□□□□ -0.91
SEC23IP-203ENST00000446561 HECW2Q9P2P5 1572 aa9.39□□□□□ -0.91
SEC23IP-203ENST00000446561 KIF3BO15066 747 aa9.39□□□□□ -0.91
SEC23IP-203ENST00000446561 TRAK2O60296 914 aa9.39□□□□□ -0.91
SEC23IP-203ENST00000446561 SMC5Q8IY18 1101 aa9.39□□□□□ -0.91
SEC23IP-203ENST00000446561 C14orf93Q9H972 538 aaKnown RBP9.39□□□□□ -0.91
SEC23IP-203ENST00000446561 CLTCQ00610 1675 aaKnown RBP9.39□□□□□ -0.91
SEC23IP-203ENST00000446561 FRMPD1Q5SYB0 1578 aa9.38□□□□□ -0.91
SEC23IP-203ENST00000446561 UGGT1Q9NYU2 1555 aa9.38□□□□□ -0.91
SEC23IP-203ENST00000446561 XRCC6P12956 609 aaKnown RBP eCLIP9.38□□□□□ -0.91
SEC23IP-203ENST00000446561 RBM25P49756 843 aaKnown RBP9.38□□□□□ -0.91
SEC23IP-203ENST00000446561 PIK3C2BO00750 1634 aa9.38□□□□□ -0.91
SEC23IP-203ENST00000446561 CAMSAP1Q5T5Y3 1602 aa9.38□□□□□ -0.91
SEC23IP-203ENST00000446561 KIF20BQ96Q89 1820 aa9.38□□□□□ -0.91
SEC23IP-203ENST00000446561 CDC42BPGQ6DT37 1551 aa9.37□□□□□ -0.91
SEC23IP-203ENST00000446561 RLBP1P12271 317 aa9.37□□□□□ -0.91
SEC23IP-203ENST00000446561 MTHFSP49914 203 aa9.37□□□□□ -0.91
SEC23IP-203ENST00000446561 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
SEC23IP-203ENST00000446561 ALDH1L2Q3SY69 923 aa9.37□□□□□ -0.91
SEC23IP-203ENST00000446561 ATF7IPQ6VMQ6 1270 aa9.37□□□□□ -0.91
SEC23IP-203ENST00000446561 RRAGDQ9NQL2 400 aaPredicted RBP9.37□□□□□ -0.91
SEC23IP-203ENST00000446561 SMC4Q9NTJ3 1288 aa9.37□□□□□ -0.91
SEC23IP-203ENST00000446561 GOLGA6L22H0YM25 854 aa9.36□□□□□ -0.91
SEC23IP-203ENST00000446561 U2AF1L5P0DN76 240 aaPredicted RBP9.36□□□□□ -0.91
SEC23IP-203ENST00000446561 U2AF1Q01081 240 aaKnown RBP eCLIP9.36□□□□□ -0.91
SEC23IP-203ENST00000446561 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
SEC23IP-203ENST00000446561 AFAP1Q8N556 730 aa9.36□□□□□ -0.91
SEC23IP-203ENST00000446561 GRPEL1Q9HAV7 217 aa9.36□□□□□ -0.91
SEC23IP-203ENST00000446561 ZFYVE9O95405 1425 aa9.36□□□□□ -0.91
SEC23IP-203ENST00000446561 TULP4Q9NRJ4 1543 aa9.36□□□□□ -0.91
SEC23IP-203ENST00000446561 RRP9O43818 475 aaKnown RBP9.35□□□□□ -0.91
SEC23IP-203ENST00000446561 HSP90AA1P07900 732 aaKnown RBP9.35□□□□□ -0.91
SEC23IP-203ENST00000446561 BRPF1P55201 1214 aaPredicted RBP9.35□□□□□ -0.91
SEC23IP-203ENST00000446561 CALD1Q05682 793 aaKnown RBP9.35□□□□□ -0.91
SEC23IP-203ENST00000446561 SAMD1Q6SPF0 538 aaPredicted RBP9.35□□□□□ -0.91
SEC23IP-203ENST00000446561 TRIM44Q96DX7 344 aaPredicted RBP9.35□□□□□ -0.91
SEC23IP-203ENST00000446561 NAP1L5Q96NT1 182 aaPredicted RBP9.35□□□□□ -0.91
SEC23IP-203ENST00000446561 RRP7AQ9Y3A4 280 aaKnown RBP9.35□□□□□ -0.91
SEC23IP-203ENST00000446561 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
SEC23IP-203ENST00000446561 COL3A1P02461 1466 aaPredicted RBP9.34□□□□□ -0.91
SEC23IP-203ENST00000446561 TPM2P07951 284 aa9.34□□□□□ -0.91
SEC23IP-203ENST00000446561 HSP90AB1P08238 724 aaKnown RBP9.34□□□□□ -0.91
SEC23IP-203ENST00000446561 BMP2KLQ5H9B9 411 aa9.34□□□□□ -0.91
SEC23IP-203ENST00000446561 ITPRIPQ8IWB1 547 aa9.34□□□□□ -0.91
SEC23IP-203ENST00000446561 ANP32BQ92688 251 aaKnown RBP9.34□□□□□ -0.91
SEC23IP-203ENST00000446561 GCC1Q96CN9 775 aa9.34□□□□□ -0.91
SEC23IP-203ENST00000446561 ATAD2Q6PL18 1390 aa9.34□□□□□ -0.91
SEC23IP-203ENST00000446561 PPIP5K1Q6PFW1 1433 aa9.33□□□□□ -0.92
SEC23IP-203ENST00000446561 ASXL2Q76L83 1435 aa9.33□□□□□ -0.92
SEC23IP-203ENST00000446561 TRIM27P14373 513 aa9.33□□□□□ -0.92
SEC23IP-203ENST00000446561 DDIT3P35638 169 aa9.33□□□□□ -0.92
SEC23IP-203ENST00000446561 TMPOP42166 694 aaKnown RBP9.33□□□□□ -0.92
SEC23IP-203ENST00000446561 NUCB1Q02818 461 aa9.33□□□□□ -0.92
SEC23IP-203ENST00000446561 RAB3GAP1Q15042 981 aa9.33□□□□□ -0.92
SEC23IP-203ENST00000446561 SLC12A5Q9H2X9 1139 aa9.33□□□□□ -0.92
SEC23IP-203ENST00000446561 ARHGAP31Q2M1Z3 1444 aa9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 NEXMIFQ5QGS0 1516 aa9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 ESPNB1AK53 854 aa9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 VGFO15240 615 aaPredicted RBP9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 EXOSC9Q06265 439 aaKnown RBP9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 CCDC173Q0VFZ6 552 aa9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 ARHGAP45Q92619 1136 aa9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 ZBTB40Q9NUA8 1239 aa9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 TRAK1Q9UPV9 953 aa9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 KIF24Q5T7B8 1368 aa9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 MLH3Q9UHC1 1453 aa9.32□□□□□ -0.92
SEC23IP-203ENST00000446561 ABCC3O15438 1527 aa9.31□□□□□ -0.92
SEC23IP-203ENST00000446561 CLEC17AQ6ZS10 378 aa9.31□□□□□ -0.92
SEC23IP-203ENST00000446561 CHD1LQ86WJ1 897 aa9.31□□□□□ -0.92
SEC23IP-203ENST00000446561 SSH1Q8WYL5 1049 aa9.31□□□□□ -0.92
SEC23IP-203ENST00000446561 TERF2IPQ9NYB0 399 aa9.31□□□□□ -0.92
SEC23IP-203ENST00000446561 TNNQ9UQP3 1299 aa9.31□□□□□ -0.92
SEC23IP-203ENST00000446561 PIK3R4Q99570 1358 aa9.31□□□□□ -0.92
SEC23IP-203ENST00000446561 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
SEC23IP-203ENST00000446561 NPATQ14207 1427 aa9.31□□□□□ -0.92
SEC23IP-203ENST00000446561 CD109Q6YHK3 1445 aa9.31□□□□□ -0.92
SEC23IP-203ENST00000446561 K7ELQ4 463 aaPredicted RBP9.3□□□□□ -0.92
SEC23IP-203ENST00000446561 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
SEC23IP-203ENST00000446561 PLEKHF1Q96S99 279 aa9.3□□□□□ -0.92
SEC23IP-203ENST00000446561 NOB1Q9ULX3 412 aaKnown RBP9.3□□□□□ -0.92
SEC23IP-203ENST00000446561 YEATS2Q9ULM3 1422 aa9.3□□□□□ -0.92
SEC23IP-203ENST00000446561 CHGAP10645 457 aaKnown RBP9.29□□□□□ -0.92
SEC23IP-203ENST00000446561 TERF1P54274 439 aa9.29□□□□□ -0.92
SEC23IP-203ENST00000446561 HSP90AA2PQ14568 343 aaPredicted RBP9.29□□□□□ -0.92
SEC23IP-203ENST00000446561 TMEM57Q8N5G2 664 aa9.29□□□□□ -0.92
SEC23IP-203ENST00000446561 TNPO1Q92973 898 aaKnown RBP9.29□□□□□ -0.92
SEC23IP-203ENST00000446561 GZF1Q9H116 711 aaPredicted RBP9.29□□□□□ -0.92
SEC23IP-203ENST00000446561 U2SURPO15042 1029 aaKnown RBP9.28□□□□□ -0.92
SEC23IP-203ENST00000446561 DIAPH1O60610 1272 aaKnown RBP9.28□□□□□ -0.92
SEC23IP-203ENST00000446561 CDC45O75419 566 aa9.28□□□□□ -0.92
SEC23IP-203ENST00000446561 FCHSD2O94868 740 aa9.28□□□□□ -0.92
SEC23IP-203ENST00000446561 HAP1P54257 671 aaPredicted RBP9.28□□□□□ -0.92
SEC23IP-203ENST00000446561 NUCB2P80303 420 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms