RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 PRDM11Q9NQV5 511 aa14.09□□□□□ -0.15
FN1-212ENST00000446046 ATAD2Q6PL18 1390 aa14.08□□□□□ -0.15
FN1-212ENST00000446046 PDCP20941 246 aa14.08□□□□□ -0.16
FN1-212ENST00000446046 MPHOSPH8Q99549 860 aa14.08□□□□□ -0.16
FN1-212ENST00000446046 CABP2Q9NPB3 220 aa14.08□□□□□ -0.16
FN1-212ENST00000446046 PLIN1O60240 522 aa14.08□□□□□ -0.16
FN1-212ENST00000446046 DNAI2Q9GZS0 605 aa14.08□□□□□ -0.16
FN1-212ENST00000446046 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
FN1-212ENST00000446046 NACAP1Q9BZK3 213 aa14.08□□□□□ -0.16
FN1-212ENST00000446046 PRKRIP1Q9H875 184 aaPredicted RBP14.08□□□□□ -0.16
FN1-212ENST00000446046 BRD4O60885 1362 aaPredicted RBP14.07□□□□□ -0.16
FN1-212ENST00000446046 STARD3NLO95772 234 aa14.07□□□□□ -0.16
FN1-212ENST00000446046 OLFM4Q6UX06 510 aa14.07□□□□□ -0.16
FN1-212ENST00000446046 CDK5RAP3Q96JB5 506 aa14.07□□□□□ -0.16
FN1-212ENST00000446046 IPO9Q96P70 1041 aaKnown RBP14.07□□□□□ -0.16
FN1-212ENST00000446046 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.07□□□□□ -0.16
FN1-212ENST00000446046 MTHFSP49914 203 aa14.07□□□□□ -0.16
FN1-212ENST00000446046 FYB1O15117 783 aa14.07□□□□□ -0.16
FN1-212ENST00000446046 PRAM1Q96QH2 718 aa14.07□□□□□ -0.16
FN1-212ENST00000446046 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
FN1-212ENST00000446046 NUCB2P80303 420 aa14.07□□□□□ -0.16
FN1-212ENST00000446046 SASS6Q6UVJ0 657 aa14.07□□□□□ -0.16
FN1-212ENST00000446046 ZNF287Q9HBT7 754 aa14.07□□□□□ -0.16
FN1-212ENST00000446046 NUTM2BA6NNL0 878 aaPredicted RBP14.06□□□□□ -0.16
FN1-212ENST00000446046 NUTM2EB1AL46 878 aaPredicted RBP14.06□□□□□ -0.16
FN1-212ENST00000446046 NUTM2GQ5VZR2 741 aa14.06□□□□□ -0.16
FN1-212ENST00000446046 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
FN1-212ENST00000446046 NUTM2AQ8IVF1 878 aaPredicted RBP14.06□□□□□ -0.16
FN1-212ENST00000446046 BICD2Q8TD16 824 aa14.06□□□□□ -0.16
FN1-212ENST00000446046 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
FN1-212ENST00000446046 CDR1P51861 262 aa14.06□□□□□ -0.16
FN1-212ENST00000446046 CCDC73Q6ZRK6 1079 aa14.06□□□□□ -0.16
FN1-212ENST00000446046 ERBINQ96RT1 1412 aa14.06□□□□□ -0.16
FN1-212ENST00000446046 MCM2P49736 904 aa14.06□□□□□ -0.16
FN1-212ENST00000446046 PIP4K2BP78356 416 aa14.06□□□□□ -0.16
FN1-212ENST00000446046 KIAA1107Q9UPP5 1409 aa14.06□□□□□ -0.16
FN1-212ENST00000446046 CCDC57Q2TAC2 916 aa14.05□□□□□ -0.16
FN1-212ENST00000446046 AFAP1Q8N556 730 aa14.05□□□□□ -0.16
FN1-212ENST00000446046 CT47B1P0C2W7 299 aaPredicted RBP14.05□□□□□ -0.16
FN1-212ENST00000446046 KIAA0586Q9BVV6 1533 aa14.05□□□□□ -0.16
FN1-212ENST00000446046 DDX49Q9Y6V7 483 aaKnown RBP14.05□□□□□ -0.16
FN1-212ENST00000446046 TTC39AQ5SRH9 613 aa14.05□□□□□ -0.16
FN1-212ENST00000446046 CCT4P50991 539 aaKnown RBP14.05□□□□□ -0.16
FN1-212ENST00000446046 CD109Q6YHK3 1445 aa14.05□□□□□ -0.16
FN1-212ENST00000446046 CDK19Q9BWU1 502 aa14.04□□□□□ -0.16
FN1-212ENST00000446046 GNAI2P04899 355 aa14.04□□□□□ -0.16
FN1-212ENST00000446046 TEX14Q8IWB6 1497 aa14.04□□□□□ -0.16
FN1-212ENST00000446046 OFD1O75665 1012 aa14.04□□□□□ -0.16
FN1-212ENST00000446046 TSPOAP1O95153 1857 aa14.03□□□□□ -0.16
FN1-212ENST00000446046 TMOD2Q9NZR1 351 aa14.03□□□□□ -0.16
FN1-212ENST00000446046 COG6Q9Y2V7 657 aa14.03□□□□□ -0.16
FN1-212ENST00000446046 CHMP5Q9NZZ3 219 aa14.03□□□□□ -0.16
FN1-212ENST00000446046 SYCP1Q15431 976 aa14.02□□□□□ -0.16
FN1-212ENST00000446046 PIP4K2AP48426 406 aaPredicted RBP14.02□□□□□ -0.16
FN1-212ENST00000446046 ANKRD1Q15327 319 aa14.02□□□□□ -0.16
FN1-212ENST00000446046 DESP17661 470 aa14.02□□□□□ -0.17
FN1-212ENST00000446046 RBM19Q9Y4C8 960 aaKnown RBP14.02□□□□□ -0.17
FN1-212ENST00000446046 PBRM1Q86U86 1689 aa14.02□□□□□ -0.17
FN1-212ENST00000446046 ZPR1O75312 459 aa14.02□□□□□ -0.17
FN1-212ENST00000446046 BIVM-ERCC5R4GMW8 1640 aa14.02□□□□□ -0.17
FN1-212ENST00000446046 TMEM132EQ6IEE7 984 aa14.01□□□□□ -0.17
FN1-212ENST00000446046 GGNBP2Q9H3C7 697 aa14.01□□□□□ -0.17
FN1-212ENST00000446046 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
FN1-212ENST00000446046 JMYQ8N9B5 988 aa14.01□□□□□ -0.17
FN1-212ENST00000446046 FSD1Q9BTV5 496 aa14.01□□□□□ -0.17
FN1-212ENST00000446046 PPP6R1Q9UPN7 881 aa14.01□□□□□ -0.17
FN1-212ENST00000446046 RBM5P52756 815 aaKnown RBP eCLIP14.01□□□□□ -0.171e-19■■□□□ 13
FN1-212ENST00000446046 DDX54Q8TDD1 881 aaKnown RBP14.01□□□□□ -0.17
FN1-212ENST00000446046 SRCIN1Q9C0H9 1055 aa14.01□□□□□ -0.17
FN1-212ENST00000446046 LUC7LQ9NQ29 371 aaKnown RBP14□□□□□ -0.17
FN1-212ENST00000446046 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
FN1-212ENST00000446046 TXLNBQ8N3L3 684 aa14□□□□□ -0.17
FN1-212ENST00000446046 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
FN1-212ENST00000446046 HDGFL1Q5TGJ6 251 aa14□□□□□ -0.17
FN1-212ENST00000446046 DHX8Q14562 1220 aaKnown RBP14□□□□□ -0.17
FN1-212ENST00000446046 CCAR2Q8N163 923 aaKnown RBP14□□□□□ -0.17
FN1-212ENST00000446046 TRIM22Q8IYM9 498 aa14□□□□□ -0.17
FN1-212ENST00000446046 ADGRL1O94910 1474 aa14□□□□□ -0.17
FN1-212ENST00000446046 ZNF644Q9H582 1327 aaPredicted RBP14□□□□□ -0.17
FN1-212ENST00000446046 CRBNQ96SW2 442 aa13.99□□□□□ -0.17
FN1-212ENST00000446046 LETM1O95202 739 aaPredicted RBP13.99□□□□□ -0.17
FN1-212ENST00000446046 PDIA4P13667 645 aaKnown RBP13.99□□□□□ -0.17
FN1-212ENST00000446046 PAF1Q8N7H5 531 aa13.99□□□□□ -0.17
FN1-212ENST00000446046 AKNAQ7Z591 1439 aa13.99□□□□□ -0.17
FN1-212ENST00000446046 NAP1L1P55209 391 aaKnown RBP13.99□□□□□ -0.17
FN1-212ENST00000446046 MAGEC2Q9UBF1 373 aaPredicted RBP13.99□□□□□ -0.17
FN1-212ENST00000446046 STIM1Q13586 685 aa13.99□□□□□ -0.17
FN1-212ENST00000446046 RUFY1Q96T51 708 aa13.99□□□□□ -0.17
FN1-212ENST00000446046 ZFYVE27Q5T4F4 411 aa13.98□□□□□ -0.17
FN1-212ENST00000446046 ZNF530Q6P9A1 599 aaPredicted RBP13.98□□□□□ -0.17
FN1-212ENST00000446046 RAPGEF6Q8TEU7 1601 aa13.98□□□□□ -0.17
FN1-212ENST00000446046 PCF11O94913 1555 aaKnown RBP13.98□□□□□ -0.17
FN1-212ENST00000446046 IGHMBP2P38935 993 aaKnown RBP13.98□□□□□ -0.17
FN1-212ENST00000446046 AK7Q96M32 723 aa13.98□□□□□ -0.17
FN1-212ENST00000446046 ABCA10Q8WWZ4 1543 aa13.98□□□□□ -0.17
FN1-212ENST00000446046 TNNT3P45378 269 aaPredicted RBP13.98□□□□□ -0.17
FN1-212ENST00000446046 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
FN1-212ENST00000446046 BTBD11A6QL63 1104 aa13.98□□□□□ -0.17
FN1-212ENST00000446046 ZNF428Q96B54 188 aa13.97□□□□□ -0.17
FN1-212ENST00000446046 ACBD3Q9H3P7 528 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms