RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 DEPDC5O75140 1603 aa23.93■■□□□ 1.42
PAXBP1-204ENST00000443785 TERF2IPQ9NYB0 399 aa23.93■■□□□ 1.42
PAXBP1-204ENST00000443785 RBM42Q9BTD8 480 aaKnown RBP23.93■■□□□ 1.42
PAXBP1-204ENST00000443785 VWDEQ8N2E2 1590 aa23.92■■□□□ 1.42
PAXBP1-204ENST00000443785 DDX19BQ9UMR2 479 aa23.92■■□□□ 1.42
PAXBP1-204ENST00000443785 SBNO2Q9Y2G9 1366 aa23.92■■□□□ 1.42
PAXBP1-204ENST00000443785 KIDINS220Q9ULH0 1771 aa23.92■■□□□ 1.42
PAXBP1-204ENST00000443785 IQSEC2Q5JU85 1478 aa23.91■■□□□ 1.42
PAXBP1-204ENST00000443785 CCDC27Q2M243 656 aa23.91■■□□□ 1.42
PAXBP1-204ENST00000443785 NLRP1Q9C000 1473 aa23.91■■□□□ 1.42
PAXBP1-204ENST00000443785 SHPRHQ149N8 1683 aa23.91■■□□□ 1.42
PAXBP1-204ENST00000443785 HDGFL2Q7Z4V5 671 aaPredicted RBP23.9■■□□□ 1.42
PAXBP1-204ENST00000443785 KRT24Q2M2I5 525 aa23.9■■□□□ 1.42
PAXBP1-204ENST00000443785 NME9Q86XW9 330 aa23.9■■□□□ 1.42
PAXBP1-204ENST00000443785 QRICH2Q9H0J4 1663 aa23.9■■□□□ 1.42
PAXBP1-204ENST00000443785 TULP4Q9NRJ4 1543 aa23.9■■□□□ 1.42
PAXBP1-204ENST00000443785 ADGRB1O14514 1584 aa23.89■■□□□ 1.41
PAXBP1-204ENST00000443785 NINLQ9Y2I6 1382 aa23.88■■□□□ 1.41
PAXBP1-204ENST00000443785 HSP90AA1P07900 732 aaKnown RBP23.88■■□□□ 1.41
PAXBP1-204ENST00000443785 ZBTB40Q9NUA8 1239 aa23.87■■□□□ 1.41
PAXBP1-204ENST00000443785 PRKCSHP14314 528 aaPredicted RBP23.87■■□□□ 1.41
PAXBP1-204ENST00000443785 ADGRB3O60242 1522 aa23.87■■□□□ 1.41
PAXBP1-204ENST00000443785 ABCA9Q8IUA7 1624 aa23.86■■□□□ 1.41
PAXBP1-204ENST00000443785 HSCBQ8IWL3 235 aa23.86■■□□□ 1.41
PAXBP1-204ENST00000443785 CYB5RLQ6IPT4 315 aa23.85■■□□□ 1.41
PAXBP1-204ENST00000443785 POLKQ9UBT6 870 aa23.85■■□□□ 1.41
PAXBP1-204ENST00000443785 NRXN1Q9ULB1 1477 aa23.85■■□□□ 1.41
PAXBP1-204ENST00000443785 MCM4P33991 863 aa23.84■■□□□ 1.41
PAXBP1-204ENST00000443785 TXNDC2Q86VQ3 553 aa23.84■■□□□ 1.41
PAXBP1-204ENST00000443785 CD2BP2O95400 341 aaKnown RBP23.84■■□□□ 1.41
PAXBP1-204ENST00000443785 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
PAXBP1-204ENST00000443785 YEATS2Q9ULM3 1422 aa23.83■■□□□ 1.4
PAXBP1-204ENST00000443785 CHD1LQ86WJ1 897 aa23.82■■□□□ 1.4
PAXBP1-204ENST00000443785 OSCARQ8IYS5 282 aa23.82■■□□□ 1.4
PAXBP1-204ENST00000443785 HSP90AB1P08238 724 aaKnown RBP23.82■■□□□ 1.4
PAXBP1-204ENST00000443785 RRAGDQ9NQL2 400 aaPredicted RBP23.82■■□□□ 1.4
PAXBP1-204ENST00000443785 C8orf58Q8NAV2 365 aa23.81■■□□□ 1.4
PAXBP1-204ENST00000443785 POGZQ7Z3K3 1410 aa23.81■■□□□ 1.4
PAXBP1-204ENST00000443785 IPO8O15397 1037 aaKnown RBP23.8■■□□□ 1.4
PAXBP1-204ENST00000443785 TRAK2O60296 914 aa23.8■■□□□ 1.4
PAXBP1-204ENST00000443785 C16orf71Q8IYS4 520 aaPredicted RBP23.8■■□□□ 1.4
PAXBP1-204ENST00000443785 GLI2P10070 1586 aa23.8■■□□□ 1.4
PAXBP1-204ENST00000443785 MIS18AQ9NYP9 233 aa23.8■■□□□ 1.4
PAXBP1-204ENST00000443785 ABCC11Q96J66 1382 aa23.8■■□□□ 1.4
PAXBP1-204ENST00000443785 XRCC6P12956 609 aaKnown RBP eCLIP23.8■■□□□ 1.4
PAXBP1-204ENST00000443785 HDAC1Q13547 482 aaPredicted RBP23.79■■□□□ 1.4
PAXBP1-204ENST00000443785 MBIPQ9NS73 344 aa23.79■■□□□ 1.4
PAXBP1-204ENST00000443785 KIAA1210Q9ULL0 1709 aa23.79■■□□□ 1.4
PAXBP1-204ENST00000443785 SMC5Q8IY18 1101 aa23.79■■□□□ 1.4
PAXBP1-204ENST00000443785 FRMPD1Q5SYB0 1578 aa23.78■■□□□ 1.4
PAXBP1-204ENST00000443785 RSPH6AQ9H0K4 717 aa23.78■■□□□ 1.4
PAXBP1-204ENST00000443785 AEBP1Q8IUX7 1158 aa23.78■■□□□ 1.4
PAXBP1-204ENST00000443785 GOLGA6L3A6NEY3 463 aa23.77■■□□□ 1.4
PAXBP1-204ENST00000443785 PLEKHG5O94827 1062 aa23.77■■□□□ 1.39
PAXBP1-204ENST00000443785 NUCB1Q02818 461 aa23.77■■□□□ 1.39
PAXBP1-204ENST00000443785 ABCC3O15438 1527 aa23.76■■□□□ 1.39
PAXBP1-204ENST00000443785 VAMP4O75379 141 aa23.76■■□□□ 1.39
PAXBP1-204ENST00000443785 CHMP5Q9NZZ3 219 aa23.76■■□□□ 1.39
PAXBP1-204ENST00000443785 SIRT2Q8IXJ6 389 aa23.76■■□□□ 1.39
PAXBP1-204ENST00000443785 ARAP3Q8WWN8 1544 aa23.75■■□□□ 1.39
PAXBP1-204ENST00000443785 KIF16BQ96L93 1317 aa23.75■■□□□ 1.39
PAXBP1-204ENST00000443785 SMARCA5O60264 1052 aaPredicted RBP23.75■■□□□ 1.39
PAXBP1-204ENST00000443785 TWISTNBQ3B726 338 aaPredicted RBP23.75■■□□□ 1.39
PAXBP1-204ENST00000443785 OTUD7AQ8TE49 926 aaPredicted RBP23.75■■□□□ 1.39
PAXBP1-204ENST00000443785 CAMSAP1Q5T5Y3 1602 aa23.75■■□□□ 1.39
PAXBP1-204ENST00000443785 ZBTB7BO15156 539 aaPredicted RBP23.73■■□□□ 1.39
PAXBP1-204ENST00000443785 MCM10Q7L590 875 aa23.73■■□□□ 1.39
PAXBP1-204ENST00000443785 FCHSD2O94868 740 aa23.73■■□□□ 1.39
PAXBP1-204ENST00000443785 TBC1D9Q6ZT07 1266 aa23.72■■□□□ 1.39
PAXBP1-204ENST00000443785 IFT172Q9UG01 1749 aa23.72■■□□□ 1.39
PAXBP1-204ENST00000443785 SLC52A1Q9NWF4 448 aa23.72■■□□□ 1.39
PAXBP1-204ENST00000443785 NFE2L2Q16236 605 aa23.71■■□□□ 1.39
PAXBP1-204ENST00000443785 FOXD4L5Q5VV16 416 aaPredicted RBP23.71■■□□□ 1.39
PAXBP1-204ENST00000443785 FOXD4L4Q8WXT5 416 aaPredicted RBP23.71■■□□□ 1.39
PAXBP1-204ENST00000443785 NECTIN2Q92692 538 aa23.71■■□□□ 1.39
PAXBP1-204ENST00000443785 YTHDC2Q9H6S0 1430 aaKnown RBP23.71■■□□□ 1.39
PAXBP1-204ENST00000443785 MRPL50Q8N5N7 158 aaKnown RBP23.71■■□□□ 1.39
PAXBP1-204ENST00000443785 PPLO60437 1756 aa23.7■■□□□ 1.38
PAXBP1-204ENST00000443785 SIGLEC1Q9BZZ2 1709 aa23.7■■□□□ 1.38
PAXBP1-204ENST00000443785 TNPO1Q92973 898 aaKnown RBP23.7■■□□□ 1.38
PAXBP1-204ENST00000443785 AAMPQ13685 434 aa23.7■■□□□ 1.38
PAXBP1-204ENST00000443785 CHAMP1Q96JM3 812 aa23.7■■□□□ 1.38
PAXBP1-204ENST00000443785 NSD2O96028 1365 aa23.69■■□□□ 1.38
PAXBP1-204ENST00000443785 SETBP1Q9Y6X0 1596 aa23.69■■□□□ 1.38
PAXBP1-204ENST00000443785 TPRNQ4KMQ1 711 aa23.69■■□□□ 1.38
PAXBP1-204ENST00000443785 TSHZ3Q63HK5 1081 aa23.68■■□□□ 1.38
PAXBP1-204ENST00000443785 SLC4A10Q6U841 1118 aa23.68■■□□□ 1.38
PAXBP1-204ENST00000443785 PPIP5K1Q6PFW1 1433 aa23.67■■□□□ 1.38
PAXBP1-204ENST00000443785 SULT6B1Q6IMI4 303 aa23.67■■□□□ 1.38
PAXBP1-204ENST00000443785 MYO3AQ8NEV4 1616 aa23.67■■□□□ 1.38
PAXBP1-204ENST00000443785 NEXMIFQ5QGS0 1516 aa23.67■■□□□ 1.38
PAXBP1-204ENST00000443785 FAM69CQ0P6D2 419 aa23.66■■□□□ 1.38
PAXBP1-204ENST00000443785 CD163L1Q9NR16 1453 aa23.66■■□□□ 1.38
PAXBP1-204ENST00000443785 CT47B1P0C2W7 299 aaPredicted RBP23.66■■□□□ 1.38
PAXBP1-204ENST00000443785 NCLP19338 710 aaKnown RBP23.66■■□□□ 1.38
PAXBP1-204ENST00000443785 SSFA2P28290 1259 aa23.66■■□□□ 1.38
PAXBP1-204ENST00000443785 L1TD1Q5T7N2 865 aaKnown RBP23.64■■□□□ 1.38
PAXBP1-204ENST00000443785 GAS2L2Q8NHY3 880 aa23.64■■□□□ 1.38
PAXBP1-204ENST00000443785 LMTK2Q8IWU2 1503 aa23.64■■□□□ 1.38
PAXBP1-204ENST00000443785 NOL8Q76FK4 1167 aaKnown RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms