RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 ANP32BQ92688 251 aaKnown RBP13.23□□□□□ -0.29
SCAF4-203ENST00000434667 C1orf115Q9H7X2 142 aa13.23□□□□□ -0.29
SCAF4-203ENST00000434667 NEO1Q92859 1461 aa13.23□□□□□ -0.29
SCAF4-203ENST00000434667 FSD2A1L4K1 749 aa13.23□□□□□ -0.29
SCAF4-203ENST00000434667 SLC24A1O60721 1099 aa13.23□□□□□ -0.29
SCAF4-203ENST00000434667 PMFBP1Q8TBY8 1022 aa13.23□□□□□ -0.29
SCAF4-203ENST00000434667 HSP90AA2PQ14568 343 aaPredicted RBP13.22□□□□□ -0.29
SCAF4-203ENST00000434667 U2SURPO15042 1029 aaKnown RBP13.22□□□□□ -0.29
SCAF4-203ENST00000434667 RWDD1Q9H446 243 aaPredicted RBP13.22□□□□□ -0.29
SCAF4-203ENST00000434667 GRPEL1Q9HAV7 217 aa13.22□□□□□ -0.29
SCAF4-203ENST00000434667 SMC4Q9NTJ3 1288 aa13.22□□□□□ -0.29
SCAF4-203ENST00000434667 EXOSC9Q06265 439 aaKnown RBP13.21□□□□□ -0.29
SCAF4-203ENST00000434667 MYH16Q9H6N6 1097 aa13.21□□□□□ -0.29
SCAF4-203ENST00000434667 NPATQ14207 1427 aa13.21□□□□□ -0.29
SCAF4-203ENST00000434667 STAC3Q96MF2 364 aa13.21□□□□□ -0.3
SCAF4-203ENST00000434667 ZFYVE9O95405 1425 aa13.2□□□□□ -0.3
SCAF4-203ENST00000434667 FBLN1P23142 703 aa13.2□□□□□ -0.3
SCAF4-203ENST00000434667 CHAMP1Q96JM3 812 aa13.2□□□□□ -0.3
SCAF4-203ENST00000434667 CHMP5Q9NZZ3 219 aa13.2□□□□□ -0.3
SCAF4-203ENST00000434667 KIF20BQ96Q89 1820 aa13.2□□□□□ -0.3
SCAF4-203ENST00000434667 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
SCAF4-203ENST00000434667 MVPQ14764 893 aaKnown RBP13.19□□□□□ -0.3
SCAF4-203ENST00000434667 TNPO1Q92973 898 aaKnown RBP13.19□□□□□ -0.3
SCAF4-203ENST00000434667 RUNDC1Q96C34 613 aa13.19□□□□□ -0.3
SCAF4-203ENST00000434667 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
SCAF4-203ENST00000434667 TRIM27P14373 513 aa13.19□□□□□ -0.3
SCAF4-203ENST00000434667 HSCBQ8IWL3 235 aa13.19□□□□□ -0.3
SCAF4-203ENST00000434667 DZIP1LQ8IYY4 767 aaKnown RBP13.19□□□□□ -0.3
SCAF4-203ENST00000434667 DIP2BQ9P265 1576 aa13.18□□□□□ -0.3
SCAF4-203ENST00000434667 ELL2O00472 640 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-203ENST00000434667 ESPNB1AK53 854 aa13.18□□□□□ -0.3
SCAF4-203ENST00000434667 CLCN1P35523 988 aa13.18□□□□□ -0.3
SCAF4-203ENST00000434667 SSH1Q8WYL5 1049 aa13.18□□□□□ -0.3
SCAF4-203ENST00000434667 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
SCAF4-203ENST00000434667 KIF13AQ9H1H9 1805 aa13.18□□□□□ -0.3
SCAF4-203ENST00000434667 RBM10P98175 930 aaKnown RBP13.18□□□□□ -0.3
SCAF4-203ENST00000434667 TMEM57Q8N5G2 664 aa13.17□□□□□ -0.3
SCAF4-203ENST00000434667 NSD3Q9BZ95 1437 aa13.17□□□□□ -0.3
SCAF4-203ENST00000434667 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-203ENST00000434667 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
SCAF4-203ENST00000434667 KIF3BO15066 747 aa13.17□□□□□ -0.3
SCAF4-203ENST00000434667 HSP90AB1P08238 724 aaKnown RBP13.17□□□□□ -0.3
SCAF4-203ENST00000434667 ZKSCAN2Q63HK3 967 aa13.16□□□□□ -0.3
SCAF4-203ENST00000434667 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
SCAF4-203ENST00000434667 AGLP35573 1532 aa13.15□□□□□ -0.3
SCAF4-203ENST00000434667 CD163L1Q9NR16 1453 aa13.15□□□□□ -0.3
SCAF4-203ENST00000434667 SSFA2P28290 1259 aa13.15□□□□□ -0.3
SCAF4-203ENST00000434667 PLCB2Q00722 1185 aa13.15□□□□□ -0.3
SCAF4-203ENST00000434667 TOPAZ1Q8N9V7 1692 aa13.15□□□□□ -0.3
SCAF4-203ENST00000434667 MRE11P49959 708 aa13.15□□□□□ -0.3
SCAF4-203ENST00000434667 FOXD4L5Q5VV16 416 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-203ENST00000434667 FOXD4L4Q8WXT5 416 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-203ENST00000434667 AKAP12Q02952 1782 aa13.14□□□□□ -0.31
SCAF4-203ENST00000434667 THUMPD2Q9BTF0 503 aaKnown RBP13.14□□□□□ -0.31
SCAF4-203ENST00000434667 SPATA31D1Q6ZQQ2 1576 aa13.14□□□□□ -0.31
SCAF4-203ENST00000434667 USP54Q70EL1 1684 aa13.14□□□□□ -0.31
SCAF4-203ENST00000434667 DNTTIP2Q5QJE6 756 aaKnown RBP13.14□□□□□ -0.31
SCAF4-203ENST00000434667 GGNBP2Q9H3C7 697 aa13.14□□□□□ -0.31
SCAF4-203ENST00000434667 PTPRMP28827 1452 aa13.14□□□□□ -0.31
SCAF4-203ENST00000434667 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
SCAF4-203ENST00000434667 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
SCAF4-203ENST00000434667 MPNDQ8N594 471 aa13.13□□□□□ -0.31
SCAF4-203ENST00000434667 APBB1O00213 710 aa13.12□□□□□ -0.31
SCAF4-203ENST00000434667 ANKRD45Q5TZF3 282 aa13.12□□□□□ -0.31
SCAF4-203ENST00000434667 RIMS1Q86UR5 1692 aaKnown RBP13.12□□□□□ -0.31
SCAF4-203ENST00000434667 MED14O60244 1454 aa13.12□□□□□ -0.31
SCAF4-203ENST00000434667 NALCNQ8IZF0 1738 aa13.11□□□□□ -0.31
SCAF4-203ENST00000434667 PKP1Q13835 747 aa13.11□□□□□ -0.31
SCAF4-203ENST00000434667 STK26Q9P289 416 aa13.11□□□□□ -0.31
SCAF4-203ENST00000434667 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
SCAF4-203ENST00000434667 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
SCAF4-203ENST00000434667 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
SCAF4-203ENST00000434667 DLC1Q96QB1 1528 aa13.1□□□□□ -0.31
SCAF4-203ENST00000434667 EFCAB2Q5VUJ9 269 aa13.09□□□□□ -0.31
SCAF4-203ENST00000434667 KIAA1211Q6ZU35 1233 aa13.09□□□□□ -0.31
SCAF4-203ENST00000434667 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
SCAF4-203ENST00000434667 MARF1Q9Y4F3 1742 aaKnown RBP13.09□□□□□ -0.31
SCAF4-203ENST00000434667 FOXD4L6Q3SYB3 417 aaPredicted RBP13.09□□□□□ -0.31
SCAF4-203ENST00000434667 FOXD4L3Q6VB84 417 aaPredicted RBP13.09□□□□□ -0.31
SCAF4-203ENST00000434667 KIF2CQ99661 725 aa13.09□□□□□ -0.31
SCAF4-203ENST00000434667 ATF7IPQ6VMQ6 1270 aa13.08□□□□□ -0.32
SCAF4-203ENST00000434667 AK9Q5TCS8 1911 aa13.08□□□□□ -0.32
SCAF4-203ENST00000434667 PTMAP06454 111 aaKnown RBP13.08□□□□□ -0.32
SCAF4-203ENST00000434667 WDR63Q8IWG1 891 aa13.08□□□□□ -0.32
SCAF4-203ENST00000434667 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
SCAF4-203ENST00000434667 DDX11L8A8MPP1 907 aa13.07□□□□□ -0.32
SCAF4-203ENST00000434667 RBM27Q9P2N5 1060 aaKnown RBP13.07□□□□□ -0.32
SCAF4-203ENST00000434667 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
SCAF4-203ENST00000434667 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
SCAF4-203ENST00000434667 C3P01024 1663 aa13.07□□□□□ -0.32
SCAF4-203ENST00000434667 RGPD1P0DJD0 1748 aa13.07□□□□□ -0.32
SCAF4-203ENST00000434667 RIPK4P57078 832 aa13.07□□□□□ -0.32
SCAF4-203ENST00000434667 FAM13BQ9NYF5 915 aa13.07□□□□□ -0.32
SCAF4-203ENST00000434667 DDX49Q9Y6V7 483 aaKnown RBP13.07□□□□□ -0.32
SCAF4-203ENST00000434667 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
SCAF4-203ENST00000434667 DNAJC5Q9H3Z4 198 aa13.06□□□□□ -0.32
SCAF4-203ENST00000434667 C16orf71Q8IYS4 520 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-203ENST00000434667 JARID2Q92833 1246 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-203ENST00000434667 TMPOP42166 694 aaKnown RBP13.06□□□□□ -0.32
SCAF4-203ENST00000434667 CFAP53Q96M91 514 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms