RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
SSB-205ENST00000422006 CDC42BPAQ5VT25 1732 aa11.05□□□□□ -0.64
SSB-205ENST00000422006 SLIT1O75093 1534 aa11.05□□□□□ -0.64
SSB-205ENST00000422006 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
SSB-205ENST00000422006 RNF123Q5XPI4 1314 aa11.05□□□□□ -0.64
SSB-205ENST00000422006 DHX29Q7Z478 1369 aaKnown RBP11.05□□□□□ -0.64
SSB-205ENST00000422006 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
SSB-205ENST00000422006 TMED8Q6PL24 325 aaPredicted RBP11.04□□□□□ -0.64
SSB-205ENST00000422006 CCDC94Q9BW85 323 aaPredicted RBP11.04□□□□□ -0.64
SSB-205ENST00000422006 WDR70Q9NW82 654 aa11.04□□□□□ -0.64
SSB-205ENST00000422006 ARHGAP23Q9P227 1491 aa11.04□□□□□ -0.64
SSB-205ENST00000422006 TESPA1A2RU30 521 aaPredicted RBP11.03□□□□□ -0.64
SSB-205ENST00000422006 RBM25P49756 843 aaKnown RBP11.03□□□□□ -0.64
SSB-205ENST00000422006 ZBED9Q6R2W3 1325 aa11.02□□□□□ -0.64
SSB-205ENST00000422006 OFD1O75665 1012 aa11.02□□□□□ -0.64
SSB-205ENST00000422006 ZNF622Q969S3 477 aaKnown RBP eCLIP11.02□□□□□ -0.647e-11■□□□□ 8.6
SSB-205ENST00000422006 CLUAP1Q96AJ1 413 aa11.02□□□□□ -0.64
SSB-205ENST00000422006 SCAF11Q99590 1463 aaKnown RBP11.02□□□□□ -0.65
SSB-205ENST00000422006 CASKIN1Q8WXD9 1431 aa11.02□□□□□ -0.65
SSB-205ENST00000422006 DSG3P32926 999 aa11.01□□□□□ -0.65
SSB-205ENST00000422006 SYCP2Q9BX26 1530 aa11.01□□□□□ -0.65
SSB-205ENST00000422006 SOX12O15370 315 aa11.01□□□□□ -0.65
SSB-205ENST00000422006 PTMAP06454 111 aaKnown RBP11.01□□□□□ -0.65
SSB-205ENST00000422006 AXDND1Q5T1B0 1012 aaPredicted RBP11.01□□□□□ -0.65
SSB-205ENST00000422006 CERS3Q8IU89 383 aa11.01□□□□□ -0.65
SSB-205ENST00000422006 STRCP1A6NGW2 1772 aa11.01□□□□□ -0.65
SSB-205ENST00000422006 SHPRHQ149N8 1683 aa11.01□□□□□ -0.65
SSB-205ENST00000422006 NWD1Q149M9 1564 aa11.01□□□□□ -0.65
SSB-205ENST00000422006 PDZRN4Q6ZMN7 1036 aaPredicted RBP11□□□□□ -0.65
SSB-205ENST00000422006 TICAM2Q86XR7 235 aa11□□□□□ -0.65
SSB-205ENST00000422006 PATL2C9JE40 543 aaKnown RBP11□□□□□ -0.65
SSB-205ENST00000422006 APPP05067 770 aa11□□□□□ -0.65
SSB-205ENST00000422006 IRX5P78411 483 aaPredicted RBP11□□□□□ -0.65
SSB-205ENST00000422006 NGEFQ8N5V2 710 aa11□□□□□ -0.65
SSB-205ENST00000422006 POLR3GLQ9BT43 218 aa10.99□□□□□ -0.65
SSB-205ENST00000422006 STK24Q9Y6E0 443 aa10.99□□□□□ -0.65
SSB-205ENST00000422006 SETD1AO15047 1707 aaKnown RBP10.99□□□□□ -0.65
SSB-205ENST00000422006 EIF2AK4Q9P2K8 1649 aaKnown RBP10.99□□□□□ -0.65
SSB-205ENST00000422006 CCDC125Q86Z20 511 aa10.99□□□□□ -0.65
SSB-205ENST00000422006 DNAJC2Q99543 621 aaKnown RBP10.98□□□□□ -0.65
SSB-205ENST00000422006 ROBO1Q9Y6N7 1651 aa10.98□□□□□ -0.65
SSB-205ENST00000422006 GPATCH8Q9UKJ3 1502 aaKnown RBP10.98□□□□□ -0.65
SSB-205ENST00000422006 MRE11P49959 708 aa10.98□□□□□ -0.65
SSB-205ENST00000422006 TMC1Q8TDI8 760 aa10.98□□□□□ -0.65
SSB-205ENST00000422006 MYH16Q9H6N6 1097 aa10.98□□□□□ -0.65
SSB-205ENST00000422006 CGNQ9P2M7 1197 aaKnown RBP10.98□□□□□ -0.65
SSB-205ENST00000422006 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.98□□□□□ -0.65
SSB-205ENST00000422006 SMG6Q86US8 1419 aaKnown RBP10.97□□□□□ -0.65
SSB-205ENST00000422006 AHDC1Q5TGY3 1603 aaPredicted RBP10.97□□□□□ -0.65
SSB-205ENST00000422006 BARGINQ6ZT62 677 aa10.97□□□□□ -0.65
SSB-205ENST00000422006 TRIM44Q96DX7 344 aaPredicted RBP10.97□□□□□ -0.65
SSB-205ENST00000422006 FYCO1Q9BQS8 1478 aa10.97□□□□□ -0.65
SSB-205ENST00000422006 PHLPP1O60346 1717 aa10.97□□□□□ -0.65
SSB-205ENST00000422006 XIRP1Q702N8 1843 aaKnown RBP10.97□□□□□ -0.65
SSB-205ENST00000422006 DYNC1I1O14576 645 aa10.96□□□□□ -0.65
SSB-205ENST00000422006 FAM117AQ9C073 453 aa10.96□□□□□ -0.65
SSB-205ENST00000422006 ARHGAP31Q2M1Z3 1444 aa10.96□□□□□ -0.66
SSB-205ENST00000422006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
SSB-205ENST00000422006 PTMSP20962 102 aa10.95□□□□□ -0.66
SSB-205ENST00000422006 FAM43BQ6ZT52 329 aaPredicted RBP10.95□□□□□ -0.66
SSB-205ENST00000422006 PRDM15P57071 1507 aaPredicted RBP10.95□□□□□ -0.66
SSB-205ENST00000422006 KCNA6P17658 529 aa10.95□□□□□ -0.66
SSB-205ENST00000422006 RXRBP28702 533 aa10.95□□□□□ -0.66
SSB-205ENST00000422006 UBR1Q8IWV7 1749 aa10.95□□□□□ -0.66
SSB-205ENST00000422006 YY1AP1Q9H869 796 aa10.95□□□□□ -0.66
SSB-205ENST00000422006 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
SSB-205ENST00000422006 UQCRHLA0A096LP55 91 aa10.94□□□□□ -0.66
SSB-205ENST00000422006 UQCRHP07919 91 aa10.94□□□□□ -0.66
SSB-205ENST00000422006 LRP5O75197 1615 aa10.94□□□□□ -0.66
SSB-205ENST00000422006 ERVK-7P63135 1459 aa10.94□□□□□ -0.66
SSB-205ENST00000422006 ARHGAP35Q9NRY4 1499 aa10.94□□□□□ -0.66
SSB-205ENST00000422006 TIAM1Q13009 1591 aa10.94□□□□□ -0.66
SSB-205ENST00000422006 GEMIN8Q9NWZ8 242 aaKnown RBP10.94□□□□□ -0.66
SSB-205ENST00000422006 EID1Q9Y6B2 187 aa10.94□□□□□ -0.66
SSB-205ENST00000422006 COL16A1Q07092 1604 aaPredicted RBP10.93□□□□□ -0.66
SSB-205ENST00000422006 MFAP1P55081 439 aaKnown RBP10.93□□□□□ -0.66
SSB-205ENST00000422006 GGT6Q6P531 493 aa10.93□□□□□ -0.66
SSB-205ENST00000422006 ATAD2Q6PL18 1390 aa10.93□□□□□ -0.66
SSB-205ENST00000422006 MAP3K1Q13233 1512 aa10.93□□□□□ -0.66
SSB-205ENST00000422006 MSH6P52701 1360 aa10.92□□□□□ -0.66
SSB-205ENST00000422006 ARHGEF1Q92888 912 aaKnown RBP10.92□□□□□ -0.66
SSB-205ENST00000422006 ZRANB1Q9UGI0 708 aa10.92□□□□□ -0.66
SSB-205ENST00000422006 ONECUT3O60422 494 aaPredicted RBP10.92□□□□□ -0.66
SSB-205ENST00000422006 CHMP4CQ96CF2 233 aa10.92□□□□□ -0.66
SSB-205ENST00000422006 R3HCC1Q9Y3T6 440 aaKnown RBP10.92□□□□□ -0.66
SSB-205ENST00000422006 ARHGEF5Q12774 1597 aa10.91□□□□□ -0.66
SSB-205ENST00000422006 MCCP23508 829 aa10.91□□□□□ -0.66
SSB-205ENST00000422006 RALBP1Q15311 655 aa10.91□□□□□ -0.66
SSB-205ENST00000422006 PHF14O94880 888 aa10.91□□□□□ -0.66
SSB-205ENST00000422006 TRAIPQ9BWF2 469 aa10.91□□□□□ -0.66
SSB-205ENST00000422006 GRPEL1Q9HAV7 217 aa10.91□□□□□ -0.66
SSB-205ENST00000422006 CCNB3Q8WWL7 1395 aa10.91□□□□□ -0.66
SSB-205ENST00000422006 MAST1Q9Y2H9 1570 aa10.91□□□□□ -0.66
SSB-205ENST00000422006 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
SSB-205ENST00000422006 LRRIQ1Q96JM4 1722 aa10.9□□□□□ -0.66
SSB-205ENST00000422006 CCDC141Q6ZP82 1450 aa10.9□□□□□ -0.66
SSB-205ENST00000422006 MBD5Q9P267 1494 aa10.9□□□□□ -0.66
SSB-205ENST00000422006 GZF1Q9H116 711 aaPredicted RBP10.9□□□□□ -0.66
SSB-205ENST00000422006 CC2D1BQ5T0F9 858 aaKnown RBP10.9□□□□□ -0.67
SSB-205ENST00000422006 TMCO4Q5TGY1 634 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms