RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 HDGFP51858 240 aaKnown RBP4.49□□□□□ -1.69
RGPD3-202ENST00000409886 TIMELESSQ9UNS1 1208 aa4.49□□□□□ -1.69
RGPD3-202ENST00000409886 C10orf71Q711Q0 1435 aa4.49□□□□□ -1.69
RGPD3-202ENST00000409886 KCNQ2O43526 872 aa4.49□□□□□ -1.69
RGPD3-202ENST00000409886 RELNP78509 3460 aa4.49□□□□□ -1.69
RGPD3-202ENST00000409886 C8orf37Q96NL8 207 aa4.49□□□□□ -1.69
RGPD3-202ENST00000409886 SPON1Q9HCB6 807 aa4.49□□□□□ -1.69
RGPD3-202ENST00000409886 VPS72Q15906 364 aa4.49□□□□□ -1.69
RGPD3-202ENST00000409886 PAPPAQ13219 1627 aa4.49□□□□□ -1.69
RGPD3-202ENST00000409886 APLP1P51693 650 aa4.48□□□□□ -1.69
RGPD3-202ENST00000409886 CNGB1Q14028 1251 aaPredicted RBP4.48□□□□□ -1.69
RGPD3-202ENST00000409886 C1orf167Q5SNV9 1468 aa4.48□□□□□ -1.69
RGPD3-202ENST00000409886 ADCY9O60503 1353 aa4.48□□□□□ -1.69
RGPD3-202ENST00000409886 UBTFP17480 764 aaKnown RBP4.48□□□□□ -1.69
RGPD3-202ENST00000409886 GGT6Q6P531 493 aa4.48□□□□□ -1.69
RGPD3-202ENST00000409886 FMN2Q9NZ56 1722 aa4.48□□□□□ -1.69
RGPD3-202ENST00000409886 SBF2Q86WG5 1849 aa4.48□□□□□ -1.69
RGPD3-202ENST00000409886 JMYQ8N9B5 988 aa4.48□□□□□ -1.69
RGPD3-202ENST00000409886 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.48□□□□□ -1.69
RGPD3-202ENST00000409886 ARID3CA6NKF2 412 aa4.48□□□□□ -1.69
RGPD3-202ENST00000409886 UNC5CLQ8IV45 518 aa4.47□□□□□ -1.69
RGPD3-202ENST00000409886 TOPAZ1Q8N9V7 1692 aa4.47□□□□□ -1.69
RGPD3-202ENST00000409886 LRPPRCP42704 1394 aaKnown RBP4.47□□□□□ -1.69
RGPD3-202ENST00000409886 RIMS2Q9UQ26 1411 aa4.47□□□□□ -1.69
RGPD3-202ENST00000409886 SLC4A3P48751 1232 aa4.47□□□□□ -1.69
RGPD3-202ENST00000409886 FAM83GA6ND36 823 aa4.47□□□□□ -1.69
RGPD3-202ENST00000409886 CAMKK2Q96RR4 588 aa4.46□□□□□ -1.7
RGPD3-202ENST00000409886 TRPM1Q7Z4N2 1603 aa4.46□□□□□ -1.7
RGPD3-202ENST00000409886 NBPF8Q3BBV2 869 aa4.46□□□□□ -1.7
RGPD3-202ENST00000409886 NBPF14Q5TI25 921 aa4.46□□□□□ -1.7
RGPD3-202ENST00000409886 KRT27Q7Z3Y8 459 aa4.46□□□□□ -1.7
RGPD3-202ENST00000409886 C5orf42Q9H799 3197 aa4.46□□□□□ -1.7
RGPD3-202ENST00000409886 CCNB3Q8WWL7 1395 aa4.46□□□□□ -1.7
RGPD3-202ENST00000409886 BCL9O00512 1426 aa4.46□□□□□ -1.7
RGPD3-202ENST00000409886 TNRC6CQ9HCJ0 1690 aaKnown RBP4.45□□□□□ -1.7
RGPD3-202ENST00000409886 IFT172Q9UG01 1749 aa4.45□□□□□ -1.7
RGPD3-202ENST00000409886 TRPM3Q9HCF6 1732 aaPredicted RBP4.45□□□□□ -1.7
RGPD3-202ENST00000409886 TNS2Q63HR2 1409 aa4.45□□□□□ -1.7
RGPD3-202ENST00000409886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.45□□□□□ -1.7
RGPD3-202ENST00000409886 PIK3C2AO00443 1686 aa4.45□□□□□ -1.7
RGPD3-202ENST00000409886 ALS2Q96Q42 1657 aa4.45□□□□□ -1.7
RGPD3-202ENST00000409886 SLC52A1Q9NWF4 448 aa4.44□□□□□ -1.7
RGPD3-202ENST00000409886 MYOM3Q5VTT5 1437 aa4.44□□□□□ -1.7
RGPD3-202ENST00000409886 DEFB132Q7Z7B7 95 aa4.44□□□□□ -1.7
RGPD3-202ENST00000409886 PTPRUQ92729 1446 aa4.44□□□□□ -1.7
RGPD3-202ENST00000409886 PPP1R1BQ9UD71 204 aaPredicted RBP4.44□□□□□ -1.7
RGPD3-202ENST00000409886 P3H3Q8IVL6 736 aa4.43□□□□□ -1.7
RGPD3-202ENST00000409886 KANK1Q14678 1352 aa4.43□□□□□ -1.7
RGPD3-202ENST00000409886 TRIOO75962 3097 aa4.43□□□□□ -1.7
RGPD3-202ENST00000409886 PRUNE2Q8WUY3 3088 aa4.43□□□□□ -1.7
RGPD3-202ENST00000409886 PSDA5PKW4 1024 aaPredicted RBP4.43□□□□□ -1.7
RGPD3-202ENST00000409886 KIF3BO15066 747 aa4.43□□□□□ -1.7
RGPD3-202ENST00000409886 R3HDM1Q15032 1099 aaKnown RBP4.43□□□□□ -1.7
RGPD3-202ENST00000409886 WASHC2AQ641Q2 1341 aa4.43□□□□□ -1.7
RGPD3-202ENST00000409886 SENP3Q9H4L4 574 aaPredicted RBP4.43□□□□□ -1.7
RGPD3-202ENST00000409886 HFM1A2PYH4 1435 aa4.43□□□□□ -1.7
RGPD3-202ENST00000409886 AKAP12Q02952 1782 aa4.43□□□□□ -1.7
RGPD3-202ENST00000409886 SEPT12Q8IYM1 358 aa4.43□□□□□ -1.7
RGPD3-202ENST00000409886 TNS4Q8IZW8 715 aa4.43□□□□□ -1.7
RGPD3-202ENST00000409886 ATP7BP35670 1465 aa4.42□□□□□ -1.7
RGPD3-202ENST00000409886 CCDC144AA2RUR9 1427 aa4.42□□□□□ -1.7
RGPD3-202ENST00000409886 LAMA1P25391 3075 aa4.42□□□□□ -1.7
RGPD3-202ENST00000409886 NHSQ6T4R5 1651 aa4.42□□□□□ -1.7
RGPD3-202ENST00000409886 BRD4O60885 1362 aaPredicted RBP4.42□□□□□ -1.7
RGPD3-202ENST00000409886 PXDNLA1KZ92 1463 aa4.42□□□□□ -1.7
RGPD3-202ENST00000409886 SBNO1A3KN83 1393 aa4.42□□□□□ -1.7
RGPD3-202ENST00000409886 RAB3GAP2Q9H2M9 1393 aa4.42□□□□□ -1.7
RGPD3-202ENST00000409886 PHRF1Q9P1Y6 1649 aaKnown RBP4.41□□□□□ -1.7
RGPD3-202ENST00000409886 HNRNPMP52272 730 aaKnown RBP eCLIP4.41□□□□□ -1.7
RGPD3-202ENST00000409886 MYT1Q01538 1121 aa4.41□□□□□ -1.7
RGPD3-202ENST00000409886 QRICH2Q9H0J4 1663 aa4.41□□□□□ -1.7
RGPD3-202ENST00000409886 MUC3AQ02505 3323 aa4.41□□□□□ -1.7
RGPD3-202ENST00000409886 THSD7BQ9C0I4 1608 aa4.41□□□□□ -1.7
RGPD3-202ENST00000409886 PKD1L3Q7Z443 1732 aa4.41□□□□□ -1.7
RGPD3-202ENST00000409886 FANCIQ9NVI1 1328 aa4.41□□□□□ -1.7
RGPD3-202ENST00000409886 ATP10DQ9P241 1426 aa4.41□□□□□ -1.7
RGPD3-202ENST00000409886 RGS19P49795 217 aa4.41□□□□□ -1.7
RGPD3-202ENST00000409886 CLTCL1P53675 1640 aa4.41□□□□□ -1.7
RGPD3-202ENST00000409886 DNAJC5GQ8N7S2 189 aa4.4□□□□□ -1.7
RGPD3-202ENST00000409886 NPHP3Q7Z494 1330 aa4.4□□□□□ -1.7
RGPD3-202ENST00000409886 TNS3Q68CZ2 1445 aa4.4□□□□□ -1.7
RGPD3-202ENST00000409886 CFDP1Q9UEE9 299 aaPredicted RBP4.4□□□□□ -1.71
RGPD3-202ENST00000409886 LRRC37A3O60309 1634 aa4.4□□□□□ -1.71
RGPD3-202ENST00000409886 HNRNPUQ00839 825 aaKnown RBP eCLIP4.4□□□□□ -1.71
RGPD3-202ENST00000409886 FAM196AQ6ZSG2 479 aa4.4□□□□□ -1.71
RGPD3-202ENST00000409886 LAS1LQ9Y4W2 734 aaKnown RBP4.4□□□□□ -1.71
RGPD3-202ENST00000409886 WDFY4Q6ZS81 3184 aa4.4□□□□□ -1.71
RGPD3-202ENST00000409886 LOC400499M0QZD8 3231 aa4.4□□□□□ -1.71
RGPD3-202ENST00000409886 CFAP65Q6ZU64 1925 aaKnown RBP4.39□□□□□ -1.71
RGPD3-202ENST00000409886 GRIN3BO60391 1043 aa4.39□□□□□ -1.71
RGPD3-202ENST00000409886 ARHGEF10O15013 1369 aa4.39□□□□□ -1.71
RGPD3-202ENST00000409886 PPLO60437 1756 aa4.39□□□□□ -1.71
RGPD3-202ENST00000409886 LMO7Q8WWI1 1683 aa4.39□□□□□ -1.71
RGPD3-202ENST00000409886 CELSR3Q9NYQ7 3312 aa4.39□□□□□ -1.71
RGPD3-202ENST00000409886 PTGER2P43116 358 aa4.39□□□□□ -1.71
RGPD3-202ENST00000409886 KLRG1Q96E93 195 aa4.38□□□□□ -1.71
RGPD3-202ENST00000409886 SGIP1Q9BQI5 828 aa4.38□□□□□ -1.71
RGPD3-202ENST00000409886 KIF15Q9NS87 1388 aa4.38□□□□□ -1.71
RGPD3-202ENST00000409886 C20orf194Q5TEA3 1177 aa4.38□□□□□ -1.71
RGPD3-202ENST00000409886 RRAGDQ9NQL2 400 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms