RNA–Protein interactions for RNA: ENST00000409643.5

PSMD1-203, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 5 BASIC

Gene PSMD1, Length 2,901 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-203ENST00000409643 PLEKHF1Q96S99 279 aa14.31□□□□□ -0.12
PSMD1-203ENST00000409643 CDK19Q9BWU1 502 aa14.31□□□□□ -0.12
PSMD1-203ENST00000409643 GGNBP2Q9H3C7 697 aa14.31□□□□□ -0.12
PSMD1-203ENST00000409643 USP35Q9P2H5 1018 aa14.31□□□□□ -0.12
PSMD1-203ENST00000409643 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.3□□□□□ -0.12
PSMD1-203ENST00000409643 COG6Q9Y2V7 657 aa14.3□□□□□ -0.12
PSMD1-203ENST00000409643 PANK1Q8TE04 598 aa14.29□□□□□ -0.12
PSMD1-203ENST00000409643 FRAT1Q92837 279 aaPredicted RBP14.29□□□□□ -0.12
PSMD1-203ENST00000409643 TMPOP42166 694 aaKnown RBP14.29□□□□□ -0.12
PSMD1-203ENST00000409643 SKAP1Q86WV1 359 aa14.29□□□□□ -0.12
PSMD1-203ENST00000409643 KNDC1Q76NI1 1749 aa14.29□□□□□ -0.12
PSMD1-203ENST00000409643 DIAPH1O60610 1272 aaKnown RBP14.28□□□□□ -0.12
PSMD1-203ENST00000409643 NBR1Q14596 966 aa14.28□□□□□ -0.12
PSMD1-203ENST00000409643 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
PSMD1-203ENST00000409643 IGHDP01880 384 aa14.28□□□□□ -0.12
PSMD1-203ENST00000409643 RGS3P49796 1198 aa14.27□□□□□ -0.12
PSMD1-203ENST00000409643 ZKSCAN2Q63HK3 967 aa14.27□□□□□ -0.13
PSMD1-203ENST00000409643 SIRT1Q96EB6 747 aa14.27□□□□□ -0.13
PSMD1-203ENST00000409643 HDGFP51858 240 aaKnown RBP14.26□□□□□ -0.13
PSMD1-203ENST00000409643 CABP1Q9NZU7 370 aa14.26□□□□□ -0.13
PSMD1-203ENST00000409643 NRXN3Q9Y4C0 1643 aa14.26□□□□□ -0.13
PSMD1-203ENST00000409643 FCHSD2O94868 740 aa14.26□□□□□ -0.13
PSMD1-203ENST00000409643 FAM135BQ49AJ0 1406 aa14.26□□□□□ -0.13
PSMD1-203ENST00000409643 EDC4Q6P2E9 1401 aaKnown RBP14.25□□□□□ -0.13
PSMD1-203ENST00000409643 RWDD1Q9H446 243 aaPredicted RBP14.25□□□□□ -0.13
PSMD1-203ENST00000409643 DAXXQ9UER7 740 aaPredicted RBP14.25□□□□□ -0.13
PSMD1-203ENST00000409643 MVPQ14764 893 aaKnown RBP14.25□□□□□ -0.13
PSMD1-203ENST00000409643 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
PSMD1-203ENST00000409643 TECPR2O15040 1411 aa14.24□□□□□ -0.13
PSMD1-203ENST00000409643 NEFMP07197 916 aa14.24□□□□□ -0.13
PSMD1-203ENST00000409643 DEKP35659 375 aaKnown RBP14.24□□□□□ -0.13
PSMD1-203ENST00000409643 CPSF1Q10570 1443 aaKnown RBP14.24□□□□□ -0.13
PSMD1-203ENST00000409643 DZIP1LQ8IYY4 767 aaKnown RBP14.23□□□□□ -0.13
PSMD1-203ENST00000409643 ZNF428Q96B54 188 aa14.23□□□□□ -0.13
PSMD1-203ENST00000409643 CPS1P31327 1500 aa14.22□□□□□ -0.13
PSMD1-203ENST00000409643 RLBP1P12271 317 aa14.22□□□□□ -0.13
PSMD1-203ENST00000409643 FTSJ3Q8IY81 847 aaKnown RBP14.22□□□□□ -0.13
PSMD1-203ENST00000409643 LRRC7Q96NW7 1537 aa14.22□□□□□ -0.13
PSMD1-203ENST00000409643 AATKQ6ZMQ8 1374 aa14.22□□□□□ -0.13
PSMD1-203ENST00000409643 CDK12Q9NYV4 1490 aaPredicted RBP14.22□□□□□ -0.13
PSMD1-203ENST00000409643 WASLO00401 505 aaPredicted RBP14.21□□□□□ -0.13
PSMD1-203ENST00000409643 RIPK4P57078 832 aa14.21□□□□□ -0.13
PSMD1-203ENST00000409643 ESF1Q9H501 851 aaKnown RBP14.21□□□□□ -0.13
PSMD1-203ENST00000409643 PPIP5K1Q6PFW1 1433 aa14.21□□□□□ -0.13
PSMD1-203ENST00000409643 MON2Q7Z3U7 1717 aa14.21□□□□□ -0.13
PSMD1-203ENST00000409643 KIF16BQ96L93 1317 aa14.21□□□□□ -0.13
PSMD1-203ENST00000409643 CALD1Q05682 793 aaKnown RBP14.21□□□□□ -0.13
PSMD1-203ENST00000409643 EXOSC9Q06265 439 aaKnown RBP14.21□□□□□ -0.13
PSMD1-203ENST00000409643 SMC4Q9NTJ3 1288 aa14.21□□□□□ -0.13
PSMD1-203ENST00000409643 DDX19BQ9UMR2 479 aa14.21□□□□□ -0.14
PSMD1-203ENST00000409643 ALDH1L2Q3SY69 923 aa14.2□□□□□ -0.14
PSMD1-203ENST00000409643 BCL2L13Q9BXK5 485 aa14.2□□□□□ -0.14
PSMD1-203ENST00000409643 PCDHB15Q9Y5E8 787 aa14.2□□□□□ -0.14
PSMD1-203ENST00000409643 MAP2P11137 1827 aaKnown RBP14.2□□□□□ -0.14
PSMD1-203ENST00000409643 KIF13AQ9H1H9 1805 aa14.2□□□□□ -0.14
PSMD1-203ENST00000409643 IPO8O15397 1037 aaKnown RBP14.2□□□□□ -0.14
PSMD1-203ENST00000409643 POLKQ9UBT6 870 aa14.2□□□□□ -0.14
PSMD1-203ENST00000409643 WAPLQ7Z5K2 1190 aa14.19□□□□□ -0.14
PSMD1-203ENST00000409643 TSR2Q969E8 191 aaKnown RBP14.19□□□□□ -0.14
PSMD1-203ENST00000409643 RSPH6AQ9H0K4 717 aa14.19□□□□□ -0.14
PSMD1-203ENST00000409643 AKAP12Q02952 1782 aa14.19□□□□□ -0.14
PSMD1-203ENST00000409643 ATF7IPQ6VMQ6 1270 aa14.18□□□□□ -0.14
PSMD1-203ENST00000409643 SENP3Q9H4L4 574 aaPredicted RBP14.18□□□□□ -0.14
PSMD1-203ENST00000409643 BRPF1P55201 1214 aaPredicted RBP14.18□□□□□ -0.14
PSMD1-203ENST00000409643 ITSN1Q15811 1721 aa14.18□□□□□ -0.14
PSMD1-203ENST00000409643 TNRQ92752 1358 aa14.18□□□□□ -0.14
PSMD1-203ENST00000409643 METP08581 1390 aa14.17□□□□□ -0.14
PSMD1-203ENST00000409643 HDAC1Q13547 482 aaPredicted RBP14.17□□□□□ -0.14
PSMD1-203ENST00000409643 SSH1Q8WYL5 1049 aa14.17□□□□□ -0.14
PSMD1-203ENST00000409643 LAS1LQ9Y4W2 734 aaKnown RBP14.17□□□□□ -0.14
PSMD1-203ENST00000409643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.17□□□□□ -0.14
PSMD1-203ENST00000409643 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
PSMD1-203ENST00000409643 CCDC61Q9Y6R9 512 aa14.17□□□□□ -0.14
PSMD1-203ENST00000409643 TRIM27P14373 513 aa14.16□□□□□ -0.14
PSMD1-203ENST00000409643 PDZRN3Q9UPQ7 1066 aa14.16□□□□□ -0.14
PSMD1-203ENST00000409643 TNNQ9UQP3 1299 aa14.16□□□□□ -0.14
PSMD1-203ENST00000409643 UBR1Q8IWV7 1749 aa14.16□□□□□ -0.14
PSMD1-203ENST00000409643 C3P01024 1663 aa14.16□□□□□ -0.14
PSMD1-203ENST00000409643 PRKAR2BP31323 418 aa14.16□□□□□ -0.14
PSMD1-203ENST00000409643 MLECQ14165 292 aa14.16□□□□□ -0.14
PSMD1-203ENST00000409643 NFE2L2Q16236 605 aa14.16□□□□□ -0.14
PSMD1-203ENST00000409643 CHMP4BQ9H444 224 aaKnown RBP14.16□□□□□ -0.14
PSMD1-203ENST00000409643 UPF2Q9HAU5 1272 aaKnown RBP14.16□□□□□ -0.14
PSMD1-203ENST00000409643 LMOD3Q0VAK6 560 aa14.15□□□□□ -0.14
PSMD1-203ENST00000409643 TMEM2Q9UHN6 1383 aa14.15□□□□□ -0.14
PSMD1-203ENST00000409643 NUDT16Q96DE0 195 aaKnown RBP14.14□□□□□ -0.15
PSMD1-203ENST00000409643 COG3Q96JB2 828 aa14.14□□□□□ -0.15
PSMD1-203ENST00000409643 USP19O94966 1318 aa14.14□□□□□ -0.15
PSMD1-203ENST00000409643 IL13P35225 146 aa14.13□□□□□ -0.15
PSMD1-203ENST00000409643 BECN1Q14457 450 aa14.13□□□□□ -0.15
PSMD1-203ENST00000409643 NOB1Q9ULX3 412 aaKnown RBP14.13□□□□□ -0.15
PSMD1-203ENST00000409643 GNAI1P63096 354 aa14.13□□□□□ -0.15
PSMD1-203ENST00000409643 ITPRIPQ8IWB1 547 aa14.13□□□□□ -0.15
PSMD1-203ENST00000409643 BCL11AQ9H165 835 aa14.13□□□□□ -0.15
PSMD1-203ENST00000409643 IFT57Q9NWB7 429 aa14.13□□□□□ -0.15
PSMD1-203ENST00000409643 ARHGAP45Q92619 1136 aa14.12□□□□□ -0.15
PSMD1-203ENST00000409643 NRKQ7Z2Y5 1582 aa14.12□□□□□ -0.15
PSMD1-203ENST00000409643 TXNDC2Q86VQ3 553 aa14.12□□□□□ -0.15
PSMD1-203ENST00000409643 TOPAZ1Q8N9V7 1692 aa14.11□□□□□ -0.15
PSMD1-203ENST00000409643 PLEKHG1Q9ULL1 1385 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms