RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 FAM161AQ3B820 660 aa7.4□□□□□ -1.22
HDAC9-203ENST00000406072 R3HCC1Q9Y3T6 440 aaKnown RBP7.4□□□□□ -1.22
HDAC9-203ENST00000406072 YTHDC2Q9H6S0 1430 aaKnown RBP7.4□□□□□ -1.22
HDAC9-203ENST00000406072 NKTRP30414 1462 aaKnown RBP7.4□□□□□ -1.23
HDAC9-203ENST00000406072 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.4□□□□□ -1.23
HDAC9-203ENST00000406072 ZBED9Q6R2W3 1325 aa7.39□□□□□ -1.23
HDAC9-203ENST00000406072 HDGFP51858 240 aaKnown RBP7.39□□□□□ -1.23
HDAC9-203ENST00000406072 TESK2Q96S53 571 aa7.39□□□□□ -1.23
HDAC9-203ENST00000406072 KDM2AQ9Y2K7 1162 aa7.39□□□□□ -1.23
HDAC9-203ENST00000406072 KIF20BQ96Q89 1820 aa7.39□□□□□ -1.23
HDAC9-203ENST00000406072 NALCNQ8IZF0 1738 aa7.39□□□□□ -1.23
HDAC9-203ENST00000406072 DCAF11Q8TEB1 546 aa7.38□□□□□ -1.23
HDAC9-203ENST00000406072 CFAP65Q6ZU64 1925 aaKnown RBP7.38□□□□□ -1.23
HDAC9-203ENST00000406072 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-203ENST00000406072 ADGRF5Q8IZF2 1346 aa7.38□□□□□ -1.23
HDAC9-203ENST00000406072 MRE11P49959 708 aa7.38□□□□□ -1.23
HDAC9-203ENST00000406072 STRCQ7RTU9 1775 aa7.38□□□□□ -1.23
HDAC9-203ENST00000406072 ATP7BP35670 1465 aa7.38□□□□□ -1.23
HDAC9-203ENST00000406072 MST1RQ04912 1400 aa7.38□□□□□ -1.23
HDAC9-203ENST00000406072 MTERF4Q7Z6M4 381 aaKnown RBP7.37□□□□□ -1.23
HDAC9-203ENST00000406072 MAPK8IP2Q13387 824 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-203ENST00000406072 BBXQ8WY36 941 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-203ENST00000406072 PDCL3Q9H2J4 239 aa7.37□□□□□ -1.23
HDAC9-203ENST00000406072 KIF1AQ12756 1690 aa7.37□□□□□ -1.23
HDAC9-203ENST00000406072 ESPNB1AK53 854 aa7.37□□□□□ -1.23
HDAC9-203ENST00000406072 C11orf95C9JLR9 678 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-203ENST00000406072 KIAA1211Q6ZU35 1233 aa7.37□□□□□ -1.23
HDAC9-203ENST00000406072 DDX11L8A8MPP1 907 aa7.37□□□□□ -1.23
HDAC9-203ENST00000406072 PLIN1O60240 522 aa7.37□□□□□ -1.23
HDAC9-203ENST00000406072 CALD1Q05682 793 aaKnown RBP7.37□□□□□ -1.23
HDAC9-203ENST00000406072 PTMSP20962 102 aa7.36□□□□□ -1.23
HDAC9-203ENST00000406072 PHRF1Q9P1Y6 1649 aaKnown RBP7.36□□□□□ -1.23
HDAC9-203ENST00000406072 BACH2Q9BYV9 841 aa7.36□□□□□ -1.23
HDAC9-203ENST00000406072 ZHX1Q9UKY1 873 aaPredicted RBP7.36□□□□□ -1.23
HDAC9-203ENST00000406072 APPP05067 770 aa7.36□□□□□ -1.23
HDAC9-203ENST00000406072 RRP1P56182 461 aaKnown RBP7.36□□□□□ -1.23
HDAC9-203ENST00000406072 ANKARQ7Z5J8 1434 aa7.36□□□□□ -1.23
HDAC9-203ENST00000406072 BRD4O60885 1362 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-203ENST00000406072 PRDM10Q9NQV6 1147 aa7.35□□□□□ -1.23
HDAC9-203ENST00000406072 KIF7Q2M1P5 1343 aa7.35□□□□□ -1.23
HDAC9-203ENST00000406072 TRHP20396 242 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-203ENST00000406072 CDCA8Q53HL2 280 aa7.35□□□□□ -1.23
HDAC9-203ENST00000406072 PRKRIP1Q9H875 184 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-203ENST00000406072 MFAP1P55081 439 aaKnown RBP7.34□□□□□ -1.23
HDAC9-203ENST00000406072 FOXD4L1Q9NU39 408 aa7.34□□□□□ -1.23
HDAC9-203ENST00000406072 POGKQ9P215 609 aa7.34□□□□□ -1.23
HDAC9-203ENST00000406072 DDX49Q9Y6V7 483 aaKnown RBP7.34□□□□□ -1.23
HDAC9-203ENST00000406072 NSD2O96028 1365 aa7.34□□□□□ -1.23
HDAC9-203ENST00000406072 DCCP43146 1447 aa7.34□□□□□ -1.23
HDAC9-203ENST00000406072 FBXO31Q5XUX0 539 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-203ENST00000406072 CARD11Q9BXL7 1154 aa7.34□□□□□ -1.23
HDAC9-203ENST00000406072 TBX22Q9Y458 520 aa7.34□□□□□ -1.23
HDAC9-203ENST00000406072 MARF1Q9Y4F3 1742 aaKnown RBP7.34□□□□□ -1.24
HDAC9-203ENST00000406072 XIRP1Q702N8 1843 aaKnown RBP7.34□□□□□ -1.24
HDAC9-203ENST00000406072 FTSJ3Q8IY81 847 aaKnown RBP7.33□□□□□ -1.24
HDAC9-203ENST00000406072 DISP3Q9P2K9 1392 aa7.33□□□□□ -1.24
HDAC9-203ENST00000406072 CD163L1Q9NR16 1453 aa7.33□□□□□ -1.24
HDAC9-203ENST00000406072 NEUROD2Q15784 382 aa7.33□□□□□ -1.24
HDAC9-203ENST00000406072 CSPP1Q1MSJ5 1256 aa7.33□□□□□ -1.24
HDAC9-203ENST00000406072 PTPRUQ92729 1446 aa7.33□□□□□ -1.24
HDAC9-203ENST00000406072 STRCP1A6NGW2 1772 aa7.33□□□□□ -1.24
HDAC9-203ENST00000406072 CENPQQ7L2Z9 268 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-203ENST00000406072 THEMISQ8N1K5 641 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-203ENST00000406072 PARD3Q8TEW0 1356 aa7.33□□□□□ -1.24
HDAC9-203ENST00000406072 TRAK2O60296 914 aa7.33□□□□□ -1.24
HDAC9-203ENST00000406072 CRBNQ96SW2 442 aa7.33□□□□□ -1.24
HDAC9-203ENST00000406072 DRC7Q8IY82 874 aa7.32□□□□□ -1.24
HDAC9-203ENST00000406072 NPHP4O75161 1426 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-203ENST00000406072 SMG6Q86US8 1419 aaKnown RBP7.32□□□□□ -1.24
HDAC9-203ENST00000406072 PDIA4P13667 645 aaKnown RBP7.32□□□□□ -1.24
HDAC9-203ENST00000406072 SKOR2Q2VWA4 1001 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-203ENST00000406072 ABCC6O95255 1503 aa7.32□□□□□ -1.24
HDAC9-203ENST00000406072 CC2D1BQ5T0F9 858 aaKnown RBP7.32□□□□□ -1.24
HDAC9-203ENST00000406072 ESF1Q9H501 851 aaKnown RBP7.32□□□□□ -1.24
HDAC9-203ENST00000406072 CHMP5Q9NZZ3 219 aa7.32□□□□□ -1.24
HDAC9-203ENST00000406072 ATAD2Q6PL18 1390 aa7.31□□□□□ -1.24
HDAC9-203ENST00000406072 NBPF1Q3BBV0 1214 aa7.31□□□□□ -1.24
HDAC9-203ENST00000406072 CPSF1Q10570 1443 aaKnown RBP7.31□□□□□ -1.24
HDAC9-203ENST00000406072 TRPM3Q9HCF6 1732 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-203ENST00000406072 CRYBG1Q9Y4K1 1723 aa7.31□□□□□ -1.24
HDAC9-203ENST00000406072 CENPJQ9HC77 1338 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-203ENST00000406072 TMF1P82094 1093 aa7.3□□□□□ -1.24
HDAC9-203ENST00000406072 NASPP49321 788 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-203ENST00000406072 SHPRHQ149N8 1683 aa7.3□□□□□ -1.24
HDAC9-203ENST00000406072 PDE3BQ13370 1112 aa7.3□□□□□ -1.24
HDAC9-203ENST00000406072 METP08581 1390 aa7.3□□□□□ -1.24
HDAC9-203ENST00000406072 ANKRD36BQ8N2N9 1353 aa7.29□□□□□ -1.24
HDAC9-203ENST00000406072 IQSEC2Q5JU85 1478 aa7.29□□□□□ -1.24
HDAC9-203ENST00000406072 MED1Q15648 1581 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-203ENST00000406072 UQCRHLA0A096LP55 91 aa7.29□□□□□ -1.24
HDAC9-203ENST00000406072 UQCRHP07919 91 aa7.29□□□□□ -1.24
HDAC9-203ENST00000406072 GRPEL1Q9HAV7 217 aa7.29□□□□□ -1.24
HDAC9-203ENST00000406072 SSH2Q76I76 1423 aa7.29□□□□□ -1.24
HDAC9-203ENST00000406072 ST20-MTHFSA0A0A6YYL1 179 aa7.29□□□□□ -1.24
HDAC9-203ENST00000406072 CFAP70Q5T0N1 1121 aa7.29□□□□□ -1.24
HDAC9-203ENST00000406072 PER1O15534 1290 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-203ENST00000406072 CLCN1P35523 988 aa7.28□□□□□ -1.24
HDAC9-203ENST00000406072 CAMTA1Q9Y6Y1 1673 aa7.28□□□□□ -1.24
HDAC9-203ENST00000406072 ADGRL3Q9HAR2 1447 aa7.28□□□□□ -1.24
HDAC9-203ENST00000406072 POLR3AO14802 1390 aaPredicted RBP7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms