RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 PTPRTO14522 1441 aa11.39□□□□□ -0.59
HPS4-203ENST00000402105 SMC5Q8IY18 1101 aa11.39□□□□□ -0.59
HPS4-203ENST00000402105 K7ELQ4 463 aaPredicted RBP11.39□□□□□ -0.59
HPS4-203ENST00000402105 NPM1P06748 294 aaKnown RBP eCLIP11.39□□□□□ -0.59
HPS4-203ENST00000402105 PRAM1Q96QH2 718 aa11.39□□□□□ -0.59
HPS4-203ENST00000402105 CABP1Q9NZU7 370 aa11.39□□□□□ -0.59
HPS4-203ENST00000402105 CALD1Q05682 793 aaKnown RBP11.38□□□□□ -0.59
HPS4-203ENST00000402105 C14orf93Q9H972 538 aaKnown RBP11.38□□□□□ -0.59
HPS4-203ENST00000402105 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
HPS4-203ENST00000402105 PREX2Q70Z35 1606 aa11.38□□□□□ -0.59
HPS4-203ENST00000402105 SMARCA5O60264 1052 aaPredicted RBP11.38□□□□□ -0.59
HPS4-203ENST00000402105 RNF214Q8ND24 703 aa11.38□□□□□ -0.59
HPS4-203ENST00000402105 CFAP65Q6ZU64 1925 aaKnown RBP11.38□□□□□ -0.59
HPS4-203ENST00000402105 FAM83GA6ND36 823 aa11.37□□□□□ -0.59
HPS4-203ENST00000402105 CCDC27Q2M243 656 aa11.37□□□□□ -0.59
HPS4-203ENST00000402105 PHACTR3Q96KR7 559 aa11.37□□□□□ -0.59
HPS4-203ENST00000402105 TERF2IPQ9NYB0 399 aa11.37□□□□□ -0.59
HPS4-203ENST00000402105 NUTM2FA1L443 756 aa11.37□□□□□ -0.59
HPS4-203ENST00000402105 FYB1O15117 783 aa11.37□□□□□ -0.59
HPS4-203ENST00000402105 PRPF40AO75400 957 aaKnown RBP11.37□□□□□ -0.59
HPS4-203ENST00000402105 MADDQ8WXG6 1647 aa11.37□□□□□ -0.59
HPS4-203ENST00000402105 KIAA1211Q6ZU35 1233 aa11.37□□□□□ -0.59
HPS4-203ENST00000402105 HDGFL2Q7Z4V5 671 aaPredicted RBP11.37□□□□□ -0.59
HPS4-203ENST00000402105 SLC4A10Q6U841 1118 aa11.36□□□□□ -0.59
HPS4-203ENST00000402105 FAM13BQ9NYF5 915 aa11.36□□□□□ -0.59
HPS4-203ENST00000402105 IQGAP3Q86VI3 1631 aa11.36□□□□□ -0.59
HPS4-203ENST00000402105 PKP1Q13835 747 aa11.36□□□□□ -0.59
HPS4-203ENST00000402105 PHF23Q9BUL5 403 aaPredicted RBP11.36□□□□□ -0.59
HPS4-203ENST00000402105 RBM27Q9P2N5 1060 aaKnown RBP11.36□□□□□ -0.59
HPS4-203ENST00000402105 R3HCC1Q9Y3T6 440 aaKnown RBP11.36□□□□□ -0.59
HPS4-203ENST00000402105 UNC13BO14795 1591 aa11.36□□□□□ -0.59
HPS4-203ENST00000402105 ERCC6L2Q5T890 1561 aa11.36□□□□□ -0.59
HPS4-203ENST00000402105 VGFO15240 615 aaPredicted RBP11.36□□□□□ -0.59
HPS4-203ENST00000402105 ZMYND15Q9H091 742 aa11.36□□□□□ -0.59
HPS4-203ENST00000402105 SKOR2Q2VWA4 1001 aaPredicted RBP11.35□□□□□ -0.59
HPS4-203ENST00000402105 OTUD7AQ8TE49 926 aaPredicted RBP11.35□□□□□ -0.59
HPS4-203ENST00000402105 PKNOX2Q96KN3 472 aa11.35□□□□□ -0.59
HPS4-203ENST00000402105 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
HPS4-203ENST00000402105 KDM5AP29375 1690 aaKnown RBP11.34□□□□□ -0.59
HPS4-203ENST00000402105 RAB3GAP1Q15042 981 aa11.34□□□□□ -0.59
HPS4-203ENST00000402105 KRT24Q2M2I5 525 aa11.34□□□□□ -0.59
HPS4-203ENST00000402105 CLTCL1P53675 1640 aa11.34□□□□□ -0.59
HPS4-203ENST00000402105 RAPGEF3O95398 923 aa11.34□□□□□ -0.59
HPS4-203ENST00000402105 TRHP20396 242 aaPredicted RBP11.34□□□□□ -0.59
HPS4-203ENST00000402105 PLCB2Q00722 1185 aa11.34□□□□□ -0.59
HPS4-203ENST00000402105 TWISTNBQ3B726 338 aaPredicted RBP11.34□□□□□ -0.59
HPS4-203ENST00000402105 PLEKHF1Q96S99 279 aa11.34□□□□□ -0.59
HPS4-203ENST00000402105 CDC45O75419 566 aa11.34□□□□□ -0.59
HPS4-203ENST00000402105 BAG4O95429 457 aaKnown RBP11.34□□□□□ -0.59
HPS4-203ENST00000402105 PTMAP06454 111 aaKnown RBP11.34□□□□□ -0.59
HPS4-203ENST00000402105 RBM25P49756 843 aaKnown RBP11.34□□□□□ -0.59
HPS4-203ENST00000402105 BMP2KLQ5H9B9 411 aa11.34□□□□□ -0.59
HPS4-203ENST00000402105 EMILIN1Q9Y6C2 1016 aa11.34□□□□□ -0.59
HPS4-203ENST00000402105 TSHZ3Q63HK5 1081 aa11.33□□□□□ -0.6
HPS4-203ENST00000402105 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
HPS4-203ENST00000402105 ZBTB7BO15156 539 aaPredicted RBP11.33□□□□□ -0.6
HPS4-203ENST00000402105 RRS1Q15050 365 aaKnown RBP11.33□□□□□ -0.6
HPS4-203ENST00000402105 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
HPS4-203ENST00000402105 CLASP1Q7Z460 1538 aa11.33□□□□□ -0.6
HPS4-203ENST00000402105 XPCQ01831 940 aaPredicted RBP11.33□□□□□ -0.6
HPS4-203ENST00000402105 WAPLQ7Z5K2 1190 aa11.33□□□□□ -0.6
HPS4-203ENST00000402105 DNTTIP2Q5QJE6 756 aaKnown RBP11.32□□□□□ -0.6
HPS4-203ENST00000402105 C8orf58Q8NAV2 365 aa11.32□□□□□ -0.6
HPS4-203ENST00000402105 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
HPS4-203ENST00000402105 CDK19Q9BWU1 502 aa11.32□□□□□ -0.6
HPS4-203ENST00000402105 A0A1W2PP64 1363 aa11.32□□□□□ -0.6
HPS4-203ENST00000402105 CT47B1P0C2W7 299 aaPredicted RBP11.32□□□□□ -0.6
HPS4-203ENST00000402105 MIS18AQ9NYP9 233 aa11.32□□□□□ -0.6
HPS4-203ENST00000402105 GCC1Q96CN9 775 aa11.32□□□□□ -0.6
HPS4-203ENST00000402105 KIF2CQ99661 725 aa11.32□□□□□ -0.6
HPS4-203ENST00000402105 LAMC1P11047 1609 aa11.32□□□□□ -0.6
HPS4-203ENST00000402105 ZNF518AQ6AHZ1 1483 aa11.31□□□□□ -0.6
HPS4-203ENST00000402105 IDI1Q13907 227 aa11.31□□□□□ -0.6
HPS4-203ENST00000402105 SIRT2Q8IXJ6 389 aa11.31□□□□□ -0.6
HPS4-203ENST00000402105 SNX21Q969T3 373 aa11.31□□□□□ -0.6
HPS4-203ENST00000402105 MBIPQ9NS73 344 aa11.31□□□□□ -0.6
HPS4-203ENST00000402105 DTNBO60941 627 aa11.31□□□□□ -0.6
HPS4-203ENST00000402105 VAMP4O75379 141 aa11.31□□□□□ -0.6
HPS4-203ENST00000402105 MLECQ14165 292 aa11.31□□□□□ -0.6
HPS4-203ENST00000402105 CD109Q6YHK3 1445 aa11.31□□□□□ -0.6
HPS4-203ENST00000402105 FANCAO15360 1455 aa11.3□□□□□ -0.6
HPS4-203ENST00000402105 TRPM2O94759 1503 aa11.3□□□□□ -0.6
HPS4-203ENST00000402105 PLPPR3Q6T4P5 718 aa11.3□□□□□ -0.6
HPS4-203ENST00000402105 CASC1Q6TDU7 716 aa11.3□□□□□ -0.6
HPS4-203ENST00000402105 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
HPS4-203ENST00000402105 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
HPS4-203ENST00000402105 ANKRD36BQ8N2N9 1353 aa11.3□□□□□ -0.6
HPS4-203ENST00000402105 SYCE3A1L190 88 aa11.29□□□□□ -0.6
HPS4-203ENST00000402105 RRP9O43818 475 aaKnown RBP11.29□□□□□ -0.6
HPS4-203ENST00000402105 GSPT1P15170 499 aaKnown RBP11.29□□□□□ -0.6
HPS4-203ENST00000402105 CCDC173Q0VFZ6 552 aa11.29□□□□□ -0.6
HPS4-203ENST00000402105 MRPL50Q8N5N7 158 aaKnown RBP11.29□□□□□ -0.6
HPS4-203ENST00000402105 ADGRL1O94910 1474 aa11.29□□□□□ -0.6
HPS4-203ENST00000402105 RILPL2Q969X0 211 aa11.29□□□□□ -0.6
HPS4-203ENST00000402105 IQGAP1P46940 1657 aa11.29□□□□□ -0.6
HPS4-203ENST00000402105 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
HPS4-203ENST00000402105 PRIM1P49642 420 aaKnown RBP11.29□□□□□ -0.6
HPS4-203ENST00000402105 GDPD2Q9HCC8 539 aa11.29□□□□□ -0.6
HPS4-203ENST00000402105 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
HPS4-203ENST00000402105 NEK4P51957 841 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms