RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 ABCC11Q96J66 1382 aa12.03□□□□□ -0.48
NUP98-206ENST00000397013 SLIT2O94813 1529 aa12.02□□□□□ -0.48
NUP98-206ENST00000397013 PMFBP1Q8TBY8 1022 aa12.02□□□□□ -0.49
NUP98-206ENST00000397013 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
NUP98-206ENST00000397013 KIF1BO60333 1816 aa12.02□□□□□ -0.49
NUP98-206ENST00000397013 SPATA31E1Q6ZUB1 1445 aa12.02□□□□□ -0.49
NUP98-206ENST00000397013 GLI3P10071 1580 aa12.01□□□□□ -0.49
NUP98-206ENST00000397013 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
NUP98-206ENST00000397013 FAM182BQ5T319 152 aa12.01□□□□□ -0.49
NUP98-206ENST00000397013 CCDC9Q9Y3X0 531 aaKnown RBP12.01□□□□□ -0.49
NUP98-206ENST00000397013 ONECUT3O60422 494 aaPredicted RBP12□□□□□ -0.49
NUP98-206ENST00000397013 HAP1P54257 671 aaPredicted RBP12□□□□□ -0.49
NUP98-206ENST00000397013 VPS72Q15906 364 aa12□□□□□ -0.49
NUP98-206ENST00000397013 TECPR2O15040 1411 aa12□□□□□ -0.49
NUP98-206ENST00000397013 CDC42BPGQ6DT37 1551 aa12□□□□□ -0.49
NUP98-206ENST00000397013 PSME1Q06323 249 aa11.99□□□□□ -0.49
NUP98-206ENST00000397013 PRAM1Q96QH2 718 aa11.99□□□□□ -0.49
NUP98-206ENST00000397013 C14orf93Q9H972 538 aaKnown RBP11.99□□□□□ -0.49
NUP98-206ENST00000397013 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
NUP98-206ENST00000397013 YTHDC2Q9H6S0 1430 aaKnown RBP11.99□□□□□ -0.49
NUP98-206ENST00000397013 PPLO60437 1756 aa11.98□□□□□ -0.49
NUP98-206ENST00000397013 CCDC144AA2RUR9 1427 aa11.98□□□□□ -0.49
NUP98-206ENST00000397013 KRT27Q7Z3Y8 459 aa11.98□□□□□ -0.49
NUP98-206ENST00000397013 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
NUP98-206ENST00000397013 ANKRD30BQ9BXX2 1392 aa11.97□□□□□ -0.49
NUP98-206ENST00000397013 FAM98CQ17RN3 349 aaKnown RBP11.97□□□□□ -0.49
NUP98-206ENST00000397013 SIRT1Q96EB6 747 aa11.97□□□□□ -0.49
NUP98-206ENST00000397013 HIRIP3Q9BW71 556 aaPredicted RBP11.97□□□□□ -0.49
NUP98-206ENST00000397013 PIK3C2GO75747 1445 aa11.96□□□□□ -0.49
NUP98-206ENST00000397013 SF3B2Q13435 895 aaKnown RBP11.96□□□□□ -0.49
NUP98-206ENST00000397013 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.49
NUP98-206ENST00000397013 TNS3Q68CZ2 1445 aa11.95□□□□□ -0.5
NUP98-206ENST00000397013 A0A0G2JS52 829 aa11.95□□□□□ -0.5
NUP98-206ENST00000397013 MYT1Q01538 1121 aa11.95□□□□□ -0.5
NUP98-206ENST00000397013 EN1Q05925 392 aaPredicted RBP11.95□□□□□ -0.5
NUP98-206ENST00000397013 BTG4Q9NY30 223 aa11.95□□□□□ -0.5
NUP98-206ENST00000397013 CHRM1P11229 460 aaPredicted RBP11.94□□□□□ -0.5
NUP98-206ENST00000397013 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.57e-14■■□□□ 12.5
NUP98-206ENST00000397013 TRAK1Q9UPV9 953 aa11.94□□□□□ -0.5
NUP98-206ENST00000397013 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
NUP98-206ENST00000397013 PRR36Q9H6K5 1346 aa11.93□□□□□ -0.5
NUP98-206ENST00000397013 RGL2O15211 777 aa11.93□□□□□ -0.5
NUP98-206ENST00000397013 HRCP23327 699 aa11.93□□□□□ -0.5
NUP98-206ENST00000397013 POGKQ9P215 609 aa11.93□□□□□ -0.5
NUP98-206ENST00000397013 DHX57Q6P158 1386 aaKnown RBP11.92□□□□□ -0.5
NUP98-206ENST00000397013 MINK1Q8N4C8 1332 aaPredicted RBP11.92□□□□□ -0.5
NUP98-206ENST00000397013 FMN2Q9NZ56 1722 aa11.91□□□□□ -0.5
NUP98-206ENST00000397013 NRXN1Q9ULB1 1477 aa11.91□□□□□ -0.5
NUP98-206ENST00000397013 USP32Q8NFA0 1604 aa11.91□□□□□ -0.5
NUP98-206ENST00000397013 R3HDM1Q15032 1099 aaKnown RBP11.91□□□□□ -0.5
NUP98-206ENST00000397013 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
NUP98-206ENST00000397013 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
NUP98-206ENST00000397013 BRWD3Q6RI45 1802 aa11.9□□□□□ -0.5
NUP98-206ENST00000397013 TAOK2Q9UL54 1235 aa11.9□□□□□ -0.5
NUP98-206ENST00000397013 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
NUP98-206ENST00000397013 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
NUP98-206ENST00000397013 BAG6P46379 1132 aa11.89□□□□□ -0.51
NUP98-206ENST00000397013 CHRNA2Q15822 529 aa11.89□□□□□ -0.51
NUP98-206ENST00000397013 EZH2Q15910 746 aaKnown RBP11.89□□□□□ -0.51
NUP98-206ENST00000397013 NUTM2GQ5VZR2 741 aa11.89□□□□□ -0.51
NUP98-206ENST00000397013 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
NUP98-206ENST00000397013 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
NUP98-206ENST00000397013 BBXQ8WY36 941 aaPredicted RBP11.89□□□□□ -0.51
NUP98-206ENST00000397013 ARHGEF10O15013 1369 aa11.89□□□□□ -0.51
NUP98-206ENST00000397013 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.89□□□□□ -0.51
NUP98-206ENST00000397013 SPATA31A5Q5VU36 1347 aa11.88□□□□□ -0.51
NUP98-206ENST00000397013 SPATA31A7Q8IWB4 1347 aa11.88□□□□□ -0.51
NUP98-206ENST00000397013 ACIN1Q9UKV3 1341 aaKnown RBP11.88□□□□□ -0.51
NUP98-206ENST00000397013 PLCB2Q00722 1185 aa11.88□□□□□ -0.51
NUP98-206ENST00000397013 RGPD8O14715 1765 aaPredicted RBP11.87□□□□□ -0.51
NUP98-206ENST00000397013 WASLO00401 505 aaPredicted RBP11.87□□□□□ -0.51
NUP98-206ENST00000397013 PRKAR2AP13861 404 aaKnown RBP11.87□□□□□ -0.51
NUP98-206ENST00000397013 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
NUP98-206ENST00000397013 TRIM37O94972 964 aa11.86□□□□□ -0.51
NUP98-206ENST00000397013 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
NUP98-206ENST00000397013 NGDNQ8NEJ9 315 aaKnown RBP11.86□□□□□ -0.51
NUP98-206ENST00000397013 STRN4Q9NRL3 753 aa11.86□□□□□ -0.51
NUP98-206ENST00000397013 KIF1AQ12756 1690 aa11.86□□□□□ -0.51
NUP98-206ENST00000397013 KNDC1Q76NI1 1749 aa11.86□□□□□ -0.51
NUP98-206ENST00000397013 IFT172Q9UG01 1749 aa11.86□□□□□ -0.51
NUP98-206ENST00000397013 DCAF11Q8TEB1 546 aa11.85□□□□□ -0.51
NUP98-206ENST00000397013 CAMKK2Q96RR4 588 aa11.85□□□□□ -0.51
NUP98-206ENST00000397013 PRDM11Q9NQV5 511 aa11.85□□□□□ -0.51
NUP98-206ENST00000397013 USP35Q9P2H5 1018 aa11.85□□□□□ -0.51
NUP98-206ENST00000397013 PLCH1Q4KWH8 1693 aa11.84□□□□□ -0.51
NUP98-206ENST00000397013 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
NUP98-206ENST00000397013 KIAA0232Q92628 1395 aa11.84□□□□□ -0.51
NUP98-206ENST00000397013 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
NUP98-206ENST00000397013 ANKARQ7Z5J8 1434 aa11.84□□□□□ -0.51
NUP98-206ENST00000397013 NUDT16Q96DE0 195 aaKnown RBP11.83□□□□□ -0.52
NUP98-206ENST00000397013 ADGRB1O14514 1584 aa11.83□□□□□ -0.52
NUP98-206ENST00000397013 SPATA31A1Q5TZJ5 1347 aa11.83□□□□□ -0.52
NUP98-206ENST00000397013 APBA3O96018 575 aa11.82□□□□□ -0.52
NUP98-206ENST00000397013 RIOK3O14730 519 aaKnown RBP11.81□□□□□ -0.52
NUP98-206ENST00000397013 LARP1Q6PKG0 1096 aaKnown RBP11.81□□□□□ -0.52
NUP98-206ENST00000397013 CDK19Q9BWU1 502 aa11.81□□□□□ -0.52
NUP98-206ENST00000397013 DLC1Q96QB1 1528 aa11.81□□□□□ -0.52
NUP98-206ENST00000397013 ABCA3Q99758 1704 aa11.8□□□□□ -0.52
NUP98-206ENST00000397013 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
NUP98-206ENST00000397013 NRAPQ86VF7 1730 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms