RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 AEBP2Q6ZN18 517 aaPredicted RBP22.22■■□□□ 1.15
NUP98-206ENST00000397013 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
NUP98-206ENST00000397013 NISCHQ9Y2I1 1504 aa20.3■□□□□ 0.84
NUP98-206ENST00000397013 PHF23Q9BUL5 403 aaPredicted RBP19.43■□□□□ 0.7
NUP98-206ENST00000397013 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
NUP98-206ENST00000397013 ABCC9O60706 1549 aa18.59■□□□□ 0.57
NUP98-206ENST00000397013 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
NUP98-206ENST00000397013 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
NUP98-206ENST00000397013 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
NUP98-206ENST00000397013 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
NUP98-206ENST00000397013 FOXD1Q16676 465 aa17.44■□□□□ 0.38
NUP98-206ENST00000397013 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
NUP98-206ENST00000397013 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
NUP98-206ENST00000397013 NACADO15069 1562 aa17.25■□□□□ 0.35
NUP98-206ENST00000397013 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.32
NUP98-206ENST00000397013 PPP6R1Q9UPN7 881 aa17.01■□□□□ 0.31
NUP98-206ENST00000397013 ADRA2BP18089 450 aa17■□□□□ 0.31
NUP98-206ENST00000397013 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
NUP98-206ENST00000397013 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
NUP98-206ENST00000397013 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
NUP98-206ENST00000397013 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
NUP98-206ENST00000397013 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
NUP98-206ENST00000397013 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
NUP98-206ENST00000397013 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.25
NUP98-206ENST00000397013 EIF4G1Q04637 1599 aaKnown RBP16.59■□□□□ 0.25
NUP98-206ENST00000397013 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
NUP98-206ENST00000397013 PIAS4Q8N2W9 510 aaPredicted RBP16.52■□□□□ 0.24
NUP98-206ENST00000397013 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
NUP98-206ENST00000397013 MSH5O43196 834 aa16.06■□□□□ 0.16
NUP98-206ENST00000397013 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
NUP98-206ENST00000397013 ERCC6Q03468 1493 aa15.98■□□□□ 0.15
NUP98-206ENST00000397013 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
NUP98-206ENST00000397013 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
NUP98-206ENST00000397013 CUX2O14529 1486 aa15.96■□□□□ 0.14
NUP98-206ENST00000397013 NESP48681 1621 aa15.94■□□□□ 0.14
NUP98-206ENST00000397013 KCNA4P22459 653 aa15.92■□□□□ 0.14
NUP98-206ENST00000397013 SMARCA4P51532 1647 aa15.82■□□□□ 0.12
NUP98-206ENST00000397013 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
NUP98-206ENST00000397013 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
NUP98-206ENST00000397013 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
NUP98-206ENST00000397013 BAZ1BQ9UIG0 1483 aaKnown RBP15.76■□□□□ 0.11
NUP98-206ENST00000397013 SCAF1Q9H7N4 1312 aaKnown RBP15.75■□□□□ 0.11
NUP98-206ENST00000397013 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
NUP98-206ENST00000397013 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
NUP98-206ENST00000397013 THOC2Q8NI27 1593 aaKnown RBP15.65■□□□□ 0.1
NUP98-206ENST00000397013 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
NUP98-206ENST00000397013 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
NUP98-206ENST00000397013 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
NUP98-206ENST00000397013 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
NUP98-206ENST00000397013 CADPSQ9ULU8 1353 aa15.57■□□□□ 0.08
NUP98-206ENST00000397013 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
NUP98-206ENST00000397013 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
NUP98-206ENST00000397013 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
NUP98-206ENST00000397013 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.07
NUP98-206ENST00000397013 WIZO95785 1651 aa15.45■□□□□ 0.06
NUP98-206ENST00000397013 NPM3O75607 178 aaKnown RBP15.41■□□□□ 0.06
NUP98-206ENST00000397013 WDR62O43379 1518 aa15.4■□□□□ 0.06
NUP98-206ENST00000397013 FANCD2Q9BXW9 1451 aa15.37■□□□□ 0.05
NUP98-206ENST00000397013 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
NUP98-206ENST00000397013 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
NUP98-206ENST00000397013 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
NUP98-206ENST00000397013 CFTRP13569 1480 aa15.31■□□□□ 0.04
NUP98-206ENST00000397013 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
NUP98-206ENST00000397013 URB2Q14146 1524 aaKnown RBP15.28■□□□□ 0.04
NUP98-206ENST00000397013 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
NUP98-206ENST00000397013 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
NUP98-206ENST00000397013 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
NUP98-206ENST00000397013 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
NUP98-206ENST00000397013 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
NUP98-206ENST00000397013 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
NUP98-206ENST00000397013 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
NUP98-206ENST00000397013 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
NUP98-206ENST00000397013 RIMBP3CA6NJZ7 1639 aa15.06■□□□□ 0
NUP98-206ENST00000397013 RIMBP3BA6NNM3 1639 aa15.06■□□□□ 0
NUP98-206ENST00000397013 RIMBP3Q9UFD9 1639 aa15.06■□□□□ 0
NUP98-206ENST00000397013 IFT140Q96RY7 1462 aa15.06■□□□□ 0
NUP98-206ENST00000397013 TOPBP1Q92547 1522 aa15.04■□□□□ -0
NUP98-206ENST00000397013 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -0
NUP98-206ENST00000397013 ARHGEF11O15085 1522 aa15.02■□□□□ -0
NUP98-206ENST00000397013 FBLN2P98095 1184 aa15.01□□□□□ -0.01
NUP98-206ENST00000397013 HOXD11P31277 338 aaPredicted RBP15□□□□□ -0.01
NUP98-206ENST00000397013 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
NUP98-206ENST00000397013 TDRD9Q8NDG6 1382 aaKnown RBP14.93□□□□□ -0.02
NUP98-206ENST00000397013 RAD54L2Q9Y4B4 1467 aa14.93□□□□□ -0.02
NUP98-206ENST00000397013 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
NUP98-206ENST00000397013 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
NUP98-206ENST00000397013 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
NUP98-206ENST00000397013 ARAP1Q96P48 1450 aa14.89□□□□□ -0.03
NUP98-206ENST00000397013 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
NUP98-206ENST00000397013 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
NUP98-206ENST00000397013 PRDM2Q13029 1718 aa14.88□□□□□ -0.03
NUP98-206ENST00000397013 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
NUP98-206ENST00000397013 SOGA1O94964 1423 aa14.86□□□□□ -0.03
NUP98-206ENST00000397013 CHD1O14646 1710 aa14.83□□□□□ -0.04
NUP98-206ENST00000397013 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
NUP98-206ENST00000397013 SNAPC4Q5SXM2 1469 aa14.79□□□□□ -0.04
NUP98-206ENST00000397013 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
NUP98-206ENST00000397013 CUX1P39880 1505 aa14.73□□□□□ -0.05
NUP98-206ENST00000397013 CLASP1Q7Z460 1538 aa14.71□□□□□ -0.06
NUP98-206ENST00000397013 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms