RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 TMEM132EQ6IEE7 984 aa9.56□□□□□ -0.88
RTN4-205ENST00000394609 MROH2AA6NES4 1674 aa9.56□□□□□ -0.88
RTN4-205ENST00000394609 KIF1BO60333 1816 aa9.56□□□□□ -0.88
RTN4-205ENST00000394609 MYOM2P54296 1465 aa9.56□□□□□ -0.88
RTN4-205ENST00000394609 PTGER2P43116 358 aa9.55□□□□□ -0.88
RTN4-205ENST00000394609 CEBPAP49715 358 aaPredicted RBP9.55□□□□□ -0.88
RTN4-205ENST00000394609 CLTCQ00610 1675 aaKnown RBP9.55□□□□□ -0.88
RTN4-205ENST00000394609 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
RTN4-205ENST00000394609 C14orf93Q9H972 538 aaKnown RBP9.55□□□□□ -0.88
RTN4-205ENST00000394609 RGL2O15211 777 aa9.54□□□□□ -0.88
RTN4-205ENST00000394609 PIK3C2BO00750 1634 aa9.54□□□□□ -0.88
RTN4-205ENST00000394609 PREX1Q8TCU6 1659 aa9.53□□□□□ -0.88
RTN4-205ENST00000394609 SCAF11Q99590 1463 aaKnown RBP9.53□□□□□ -0.88
RTN4-205ENST00000394609 NRXN1Q9ULB1 1477 aa9.53□□□□□ -0.88
RTN4-205ENST00000394609 DISP3Q9P2K9 1392 aa9.53□□□□□ -0.88
RTN4-205ENST00000394609 TMF1P82094 1093 aa9.53□□□□□ -0.88
RTN4-205ENST00000394609 TRAK1Q9UPV9 953 aa9.53□□□□□ -0.88
RTN4-205ENST00000394609 PIK3C2GO75747 1445 aa9.53□□□□□ -0.88
RTN4-205ENST00000394609 KIF3CO14782 793 aa9.53□□□□□ -0.88
RTN4-205ENST00000394609 TMC2Q8TDI7 906 aa9.52□□□□□ -0.89
RTN4-205ENST00000394609 C2orf72A6NCS6 295 aa9.51□□□□□ -0.89
RTN4-205ENST00000394609 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
RTN4-205ENST00000394609 LAMC1P11047 1609 aa9.51□□□□□ -0.89
RTN4-205ENST00000394609 CCER2I3L3R5 266 aa9.51□□□□□ -0.89
RTN4-205ENST00000394609 PRKRIP1Q9H875 184 aaPredicted RBP9.51□□□□□ -0.89
RTN4-205ENST00000394609 NEXMIFQ5QGS0 1516 aa9.51□□□□□ -0.89
RTN4-205ENST00000394609 TMEM131LA2VDJ0 1609 aa9.5□□□□□ -0.89
RTN4-205ENST00000394609 EIF3AQ14152 1382 aaKnown RBP9.5□□□□□ -0.89
RTN4-205ENST00000394609 TNRQ92752 1358 aa9.5□□□□□ -0.89
RTN4-205ENST00000394609 SPATA31D1Q6ZQQ2 1576 aa9.5□□□□□ -0.89
RTN4-205ENST00000394609 STK26Q9P289 416 aa9.5□□□□□ -0.89
RTN4-205ENST00000394609 IFT172Q9UG01 1749 aa9.49□□□□□ -0.89
RTN4-205ENST00000394609 A2ML1A8K2U0 1454 aa9.49□□□□□ -0.89
RTN4-205ENST00000394609 SLC34A2O95436 690 aa9.49□□□□□ -0.89
RTN4-205ENST00000394609 PPLO60437 1756 aa9.48□□□□□ -0.89
RTN4-205ENST00000394609 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
RTN4-205ENST00000394609 CCDC184Q52MB2 194 aa9.48□□□□□ -0.89
RTN4-205ENST00000394609 ANP32EQ9BTT0 268 aa9.48□□□□□ -0.89
RTN4-205ENST00000394609 PANK3Q9H999 370 aa9.48□□□□□ -0.89
RTN4-205ENST00000394609 CENPJQ9HC77 1338 aaPredicted RBP9.47□□□□□ -0.89
RTN4-205ENST00000394609 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
RTN4-205ENST00000394609 SAFB2Q14151 953 aaKnown RBP eCLIP9.47□□□□□ -0.89
RTN4-205ENST00000394609 IQGAP1P46940 1657 aa9.47□□□□□ -0.89
RTN4-205ENST00000394609 PBX2P40425 430 aa9.47□□□□□ -0.89
RTN4-205ENST00000394609 KIAA1210Q9ULL0 1709 aa9.46□□□□□ -0.89
RTN4-205ENST00000394609 ADGRB1O14514 1584 aa9.46□□□□□ -0.89
RTN4-205ENST00000394609 CDCA8Q53HL2 280 aa9.46□□□□□ -0.9
RTN4-205ENST00000394609 BCANQ96GW7 911 aa9.46□□□□□ -0.9
RTN4-205ENST00000394609 POLR1AO95602 1720 aaPredicted RBP9.45□□□□□ -0.9
RTN4-205ENST00000394609 PER1O15534 1290 aaPredicted RBP9.45□□□□□ -0.9
RTN4-205ENST00000394609 KHSRPQ92945 711 aaKnown RBP eCLIP9.45□□□□□ -0.91e-8■■□□□ 12.1
RTN4-205ENST00000394609 SUPT16HQ9Y5B9 1047 aaKnown RBP9.45□□□□□ -0.9
RTN4-205ENST00000394609 MYO5BQ9ULV0 1848 aa9.45□□□□□ -0.9
RTN4-205ENST00000394609 SETBP1Q9Y6X0 1596 aa9.45□□□□□ -0.9
RTN4-205ENST00000394609 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.45□□□□□ -0.9
RTN4-205ENST00000394609 MRS2Q9HD23 443 aa9.45□□□□□ -0.9
RTN4-205ENST00000394609 PCDHGA4Q9Y5G9 962 aa9.45□□□□□ -0.9
RTN4-205ENST00000394609 HDGFP51858 240 aaKnown RBP9.44□□□□□ -0.9
RTN4-205ENST00000394609 TMEM2Q9UHN6 1383 aa9.43□□□□□ -0.9
RTN4-205ENST00000394609 SLC24A1O60721 1099 aa9.43□□□□□ -0.9
RTN4-205ENST00000394609 CC2D1BQ5T0F9 858 aaKnown RBP9.43□□□□□ -0.9
RTN4-205ENST00000394609 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
RTN4-205ENST00000394609 PSDA5PKW4 1024 aaPredicted RBP9.42□□□□□ -0.9
RTN4-205ENST00000394609 NUDT7P0C024 238 aa9.42□□□□□ -0.9
RTN4-205ENST00000394609 LTKP29376 864 aa9.42□□□□□ -0.9
RTN4-205ENST00000394609 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
RTN4-205ENST00000394609 POGKQ9P215 609 aa9.42□□□□□ -0.9
RTN4-205ENST00000394609 LSM11P83369 360 aaKnown RBP eCLIP9.42□□□□□ -0.9
RTN4-205ENST00000394609 ANKRD13DQ6ZTN6 518 aa9.42□□□□□ -0.9
RTN4-205ENST00000394609 TXNDC2Q86VQ3 553 aa9.42□□□□□ -0.9
RTN4-205ENST00000394609 ASXL1Q8IXJ9 1541 aa9.41□□□□□ -0.9
RTN4-205ENST00000394609 YTHDC2Q9H6S0 1430 aaKnown RBP9.41□□□□□ -0.9
RTN4-205ENST00000394609 ALKQ9UM73 1620 aa9.41□□□□□ -0.9
RTN4-205ENST00000394609 FAM9BQ8IZU0 186 aa9.41□□□□□ -0.9
RTN4-205ENST00000394609 TMC1Q8TDI8 760 aa9.41□□□□□ -0.9
RTN4-205ENST00000394609 KNSTRNQ9Y448 316 aa9.41□□□□□ -0.9
RTN4-205ENST00000394609 MINK1Q8N4C8 1332 aaPredicted RBP9.41□□□□□ -0.9
RTN4-205ENST00000394609 METP08581 1390 aa9.41□□□□□ -0.9
RTN4-205ENST00000394609 SBNO2Q9Y2G9 1366 aa9.41□□□□□ -0.9
RTN4-205ENST00000394609 NLRP1Q9C000 1473 aa9.4□□□□□ -0.9
RTN4-205ENST00000394609 WAPLQ7Z5K2 1190 aa9.4□□□□□ -0.9
RTN4-205ENST00000394609 RALBP1Q15311 655 aa9.4□□□□□ -0.91
RTN4-205ENST00000394609 THEMISQ8N1K5 641 aaPredicted RBP9.4□□□□□ -0.91
RTN4-205ENST00000394609 SLC26A8Q96RN1 970 aa9.4□□□□□ -0.91
RTN4-205ENST00000394609 SLC12A5Q9H2X9 1139 aa9.4□□□□□ -0.91
RTN4-205ENST00000394609 TSHZ2Q9NRE2 1034 aa9.4□□□□□ -0.91
RTN4-205ENST00000394609 EID1Q9Y6B2 187 aa9.4□□□□□ -0.91
RTN4-205ENST00000394609 EVC2Q86UK5 1308 aa9.4□□□□□ -0.91
RTN4-205ENST00000394609 KTN1Q86UP2 1357 aaKnown RBP9.4□□□□□ -0.91
RTN4-205ENST00000394609 PTPRMP28827 1452 aa9.39□□□□□ -0.91
RTN4-205ENST00000394609 FER1L4A9Z1Z3 1794 aa9.39□□□□□ -0.91
RTN4-205ENST00000394609 PPP1R37O75864 691 aa9.39□□□□□ -0.91
RTN4-205ENST00000394609 LHX6Q9UPM6 363 aa9.39□□□□□ -0.91
RTN4-205ENST00000394609 C3P01024 1663 aa9.39□□□□□ -0.91
RTN4-205ENST00000394609 SRPK2P78362 688 aaKnown RBP9.38□□□□□ -0.91
RTN4-205ENST00000394609 CARD14Q9BXL6 1004 aa9.38□□□□□ -0.91
RTN4-205ENST00000394609 RYDENQ9NUL5 291 aaKnown RBP9.38□□□□□ -0.91
RTN4-205ENST00000394609 MYBBP1AQ9BQG0 1328 aaKnown RBP9.38□□□□□ -0.91
RTN4-205ENST00000394609 LRPPRCP42704 1394 aaKnown RBP9.38□□□□□ -0.91
RTN4-205ENST00000394609 HNRNPUQ00839 825 aaKnown RBP eCLIP9.37□□□□□ -0.913e-6■□□□□ 10
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms