RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 TRIM29Q14134 588 aa15.33■□□□□ 0.04
CLTC-202ENST00000393043 FOXD4L6Q3SYB3 417 aaPredicted RBP15.33■□□□□ 0.04
CLTC-202ENST00000393043 FOXD4L3Q6VB84 417 aaPredicted RBP15.33■□□□□ 0.04
CLTC-202ENST00000393043 NFKBIBQ15653 356 aa15.32■□□□□ 0.04
CLTC-202ENST00000393043 ANKLE2Q86XL3 938 aa15.32■□□□□ 0.04
CLTC-202ENST00000393043 BECN2A8MW95 431 aa15.32■□□□□ 0.04
CLTC-202ENST00000393043 TMPOP42166 694 aaKnown RBP15.32■□□□□ 0.04
CLTC-202ENST00000393043 NFE2L2Q16236 605 aa15.32■□□□□ 0.04
CLTC-202ENST00000393043 ERC1Q8IUD2 1116 aa15.32■□□□□ 0.04
CLTC-202ENST00000393043 HDGFL1Q5TGJ6 251 aa15.32■□□□□ 0.04
CLTC-202ENST00000393043 AMOTL1Q8IY63 956 aa15.32■□□□□ 0.04
CLTC-202ENST00000393043 NUDT16Q96DE0 195 aaKnown RBP15.32■□□□□ 0.04
CLTC-202ENST00000393043 MCM2P49736 904 aa15.32■□□□□ 0.04
CLTC-202ENST00000393043 APPP05067 770 aa15.31■□□□□ 0.04
CLTC-202ENST00000393043 NOL10Q9BSC4 688 aaKnown RBP15.31■□□□□ 0.04
CLTC-202ENST00000393043 FANCAO15360 1455 aa15.31■□□□□ 0.04
CLTC-202ENST00000393043 TATP17735 454 aaPredicted RBP15.31■□□□□ 0.04
CLTC-202ENST00000393043 ABCC11Q96J66 1382 aa15.31■□□□□ 0.04
CLTC-202ENST00000393043 CLSTN1O94985 981 aa15.31■□□□□ 0.04
CLTC-202ENST00000393043 DHX29Q7Z478 1369 aaKnown RBP15.31■□□□□ 0.04
CLTC-202ENST00000393043 HIP1O00291 1037 aa15.3■□□□□ 0.04
CLTC-202ENST00000393043 RABEP1Q15276 862 aa15.3■□□□□ 0.04
CLTC-202ENST00000393043 SLC26A8Q96RN1 970 aa15.3■□□□□ 0.04
CLTC-202ENST00000393043 PSMA5P28066 241 aa15.3■□□□□ 0.04
CLTC-202ENST00000393043 PPP6R1Q9UPN7 881 aa15.3■□□□□ 0.04
CLTC-202ENST00000393043 ADGRF5Q8IZF2 1346 aa15.29■□□□□ 0.04
CLTC-202ENST00000393043 NEUROD6Q96NK8 337 aa15.29■□□□□ 0.04
CLTC-202ENST00000393043 ITSN2Q9NZM3 1697 aa15.29■□□□□ 0.04
CLTC-202ENST00000393043 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.29■□□□□ 0.04
CLTC-202ENST00000393043 VPS37DQ86XT2 251 aa15.29■□□□□ 0.04
CLTC-202ENST00000393043 C1orf115Q9H7X2 142 aa15.29■□□□□ 0.04
CLTC-202ENST00000393043 VPS37CA5D8V6 355 aaPredicted RBP15.28■□□□□ 0.04
CLTC-202ENST00000393043 PTPRKQ15262 1439 aa15.28■□□□□ 0.04
CLTC-202ENST00000393043 MARCH6O60337 910 aa15.28■□□□□ 0.04
CLTC-202ENST00000393043 CTTNBP2Q8WZ74 1663 aa15.28■□□□□ 0.04
CLTC-202ENST00000393043 NSD2O96028 1365 aa15.28■□□□□ 0.04
CLTC-202ENST00000393043 ZNF530Q6P9A1 599 aaPredicted RBP15.28■□□□□ 0.04
CLTC-202ENST00000393043 MAPKBP1O60336 1514 aa15.28■□□□□ 0.04
CLTC-202ENST00000393043 DENND4BO75064 1496 aaPredicted RBP15.28■□□□□ 0.04
CLTC-202ENST00000393043 ATP10BO94823 1461 aa15.28■□□□□ 0.04
CLTC-202ENST00000393043 RRS1Q15050 365 aaKnown RBP15.27■□□□□ 0.04
CLTC-202ENST00000393043 SRCIN1Q9C0H9 1055 aa15.27■□□□□ 0.04
CLTC-202ENST00000393043 NUP153P49790 1475 aaKnown RBP15.27■□□□□ 0.04
CLTC-202ENST00000393043 FSD1Q9BTV5 496 aa15.27■□□□□ 0.04
CLTC-202ENST00000393043 BICD2Q8TD16 824 aa15.27■□□□□ 0.03
CLTC-202ENST00000393043 RALYLQ86SE5 291 aaKnown RBP15.26■□□□□ 0.03
CLTC-202ENST00000393043 CHD1LQ86WJ1 897 aa15.26■□□□□ 0.03
CLTC-202ENST00000393043 C14orf93Q9H972 538 aaKnown RBP15.26■□□□□ 0.03
CLTC-202ENST00000393043 TCOF1Q13428 1488 aaKnown RBP15.26■□□□□ 0.03
CLTC-202ENST00000393043 ERICH2A1L162 156 aa15.26■□□□□ 0.03
CLTC-202ENST00000393043 RPAP2Q8IXW5 612 aaPredicted RBP15.26■□□□□ 0.03
CLTC-202ENST00000393043 LRRCC1Q9C099 1032 aa15.26■□□□□ 0.03
CLTC-202ENST00000393043 PLCH2O75038 1416 aa15.26■□□□□ 0.03
CLTC-202ENST00000393043 NKTRP30414 1462 aaKnown RBP15.25■□□□□ 0.03
CLTC-202ENST00000393043 SPG7Q9UQ90 795 aa15.25■□□□□ 0.03
CLTC-202ENST00000393043 IDI1Q13907 227 aa15.25■□□□□ 0.03
CLTC-202ENST00000393043 TPD52L1Q16890 204 aaPredicted RBP15.25■□□□□ 0.03
CLTC-202ENST00000393043 TPM3P06753 285 aa15.25■□□□□ 0.03
CLTC-202ENST00000393043 NOS1P29475 1434 aa15.24■□□□□ 0.03
CLTC-202ENST00000393043 ALDH1L2Q3SY69 923 aa15.24■□□□□ 0.03
CLTC-202ENST00000393043 HOOK1Q9UJC3 728 aaKnown RBP15.24■□□□□ 0.03
CLTC-202ENST00000393043 DUOX2Q9NRD8 1548 aa15.24■□□□□ 0.03
CLTC-202ENST00000393043 NFXL1Q6ZNB6 911 aa15.24■□□□□ 0.03
CLTC-202ENST00000393043 RALGAPBQ86X10 1494 aa15.24■□□□□ 0.03
CLTC-202ENST00000393043 WASHC4Q2M389 1173 aa15.24■□□□□ 0.03
CLTC-202ENST00000393043 NEK4P51957 841 aa15.24■□□□□ 0.03
CLTC-202ENST00000393043 CREBRFQ8IUR6 639 aa15.23■□□□□ 0.03
CLTC-202ENST00000393043 KCNH5Q8NCM2 988 aa15.23■□□□□ 0.03
CLTC-202ENST00000393043 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
CLTC-202ENST00000393043 WAPLQ7Z5K2 1190 aa15.23■□□□□ 0.03
CLTC-202ENST00000393043 RSPH6AQ9H0K4 717 aa15.23■□□□□ 0.03
CLTC-202ENST00000393043 NUP160Q12769 1436 aa15.23■□□□□ 0.03
CLTC-202ENST00000393043 KIF6Q6ZMV9 814 aa15.23■□□□□ 0.03
CLTC-202ENST00000393043 KDM5BQ9UGL1 1544 aa15.22■□□□□ 0.03
CLTC-202ENST00000393043 TPM1P09493 284 aa15.22■□□□□ 0.03
CLTC-202ENST00000393043 MRE11P49959 708 aa15.22■□□□□ 0.03
CLTC-202ENST00000393043 RARSP54136 660 aaKnown RBP15.22■□□□□ 0.03
CLTC-202ENST00000393043 SAFBQ15424 915 aaKnown RBP eCLIP15.22■□□□□ 0.03
CLTC-202ENST00000393043 MBD3O95983 291 aa15.22■□□□□ 0.03
CLTC-202ENST00000393043 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
CLTC-202ENST00000393043 CFAP43Q8NDM7 1665 aa15.22■□□□□ 0.03
CLTC-202ENST00000393043 TSR1Q2NL82 804 aaKnown RBP15.22■□□□□ 0.03
CLTC-202ENST00000393043 PDCP20941 246 aa15.21■□□□□ 0.03
CLTC-202ENST00000393043 DISP3Q9P2K9 1392 aa15.21■□□□□ 0.03
CLTC-202ENST00000393043 ADAMTS12P58397 1594 aa15.21■□□□□ 0.03
CLTC-202ENST00000393043 GNAT3A8MTJ3 354 aa15.21■□□□□ 0.03
CLTC-202ENST00000393043 WASLO00401 505 aaPredicted RBP15.21■□□□□ 0.03
CLTC-202ENST00000393043 CWC22Q9HCG8 908 aaKnown RBP15.21■□□□□ 0.03
CLTC-202ENST00000393043 CABP4P57796 275 aa15.21■□□□□ 0.02
CLTC-202ENST00000393043 SASS6Q6UVJ0 657 aa15.21■□□□□ 0.02
CLTC-202ENST00000393043 TMEM57Q8N5G2 664 aa15.21■□□□□ 0.02
CLTC-202ENST00000393043 TBC1D2BQ9UPU7 963 aa15.2■□□□□ 0.02
CLTC-202ENST00000393043 TPM2P07951 284 aa15.2■□□□□ 0.02
CLTC-202ENST00000393043 TRAK2O60296 914 aa15.2■□□□□ 0.02
CLTC-202ENST00000393043 KIAA0556O60303 1618 aa15.2■□□□□ 0.02
CLTC-202ENST00000393043 CCDC47Q96A33 483 aaKnown RBP15.2■□□□□ 0.02
CLTC-202ENST00000393043 WDR62O43379 1518 aa15.18■□□□□ 0.02
CLTC-202ENST00000393043 VPS53Q5VIR6 699 aa15.18■□□□□ 0.02
CLTC-202ENST00000393043 BTBD11A6QL63 1104 aa15.18■□□□□ 0.02
CLTC-202ENST00000393043 MSH5O43196 834 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms