RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 QRICH2Q9H0J4 1663 aa22.66■■□□□ 1.22
ERCC2-201ENST00000391941 SETBP1Q9Y6X0 1596 aa22.66■■□□□ 1.22
ERCC2-201ENST00000391941 PLEKHF1Q96S99 279 aa22.66■■□□□ 1.22
ERCC2-201ENST00000391941 ADGRB3O60242 1522 aa22.65■■□□□ 1.22
ERCC2-201ENST00000391941 MINK1Q8N4C8 1332 aaPredicted RBP22.65■■□□□ 1.22
ERCC2-201ENST00000391941 ANKRD45Q5TZF3 282 aa22.64■■□□□ 1.22
ERCC2-201ENST00000391941 PNNQ9H307 717 aaKnown RBP22.64■■□□□ 1.22
ERCC2-201ENST00000391941 ADGRB1O14514 1584 aa22.64■■□□□ 1.22
ERCC2-201ENST00000391941 ZBTB40Q9NUA8 1239 aa22.64■■□□□ 1.21
ERCC2-201ENST00000391941 DDX19BQ9UMR2 479 aa22.64■■□□□ 1.21
ERCC2-201ENST00000391941 HSP90AB1P08238 724 aaKnown RBP22.64■■□□□ 1.21
ERCC2-201ENST00000391941 GRPEL1Q9HAV7 217 aa22.64■■□□□ 1.21
ERCC2-201ENST00000391941 ABCA9Q8IUA7 1624 aa22.63■■□□□ 1.21
ERCC2-201ENST00000391941 HSP90AA1P07900 732 aaKnown RBP22.62■■□□□ 1.21
ERCC2-201ENST00000391941 HDAC1Q13547 482 aaPredicted RBP22.62■■□□□ 1.21
ERCC2-201ENST00000391941 HMOX1P09601 288 aa22.62■■□□□ 1.21
ERCC2-201ENST00000391941 SMC5Q8IY18 1101 aa22.62■■□□□ 1.21
ERCC2-201ENST00000391941 ATAD2Q6PL18 1390 aa22.61■■□□□ 1.21
ERCC2-201ENST00000391941 ZC3H13Q5T200 1668 aaKnown RBP22.61■■□□□ 1.21
ERCC2-201ENST00000391941 EVC2Q86UK5 1308 aa22.61■■□□□ 1.21
ERCC2-201ENST00000391941 ANKRD36BQ8N2N9 1353 aa22.61■■□□□ 1.21
ERCC2-201ENST00000391941 TSPYL6Q8N831 410 aa22.6■■□□□ 1.21
ERCC2-201ENST00000391941 A0A1W2PP64 1363 aa22.6■■□□□ 1.21
ERCC2-201ENST00000391941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.6■■□□□ 1.21
ERCC2-201ENST00000391941 NPATQ14207 1427 aa22.6■■□□□ 1.21
ERCC2-201ENST00000391941 CT47B1P0C2W7 299 aaPredicted RBP22.59■■□□□ 1.21
ERCC2-201ENST00000391941 NCBP3Q53F19 620 aaKnown RBP22.59■■□□□ 1.21
ERCC2-201ENST00000391941 CHD1LQ86WJ1 897 aa22.59■■□□□ 1.21
ERCC2-201ENST00000391941 KIF2CQ99661 725 aa22.59■■□□□ 1.21
ERCC2-201ENST00000391941 USP32Q8NFA0 1604 aa22.59■■□□□ 1.21
ERCC2-201ENST00000391941 NUCB1Q02818 461 aa22.58■■□□□ 1.2
ERCC2-201ENST00000391941 FYB1O15117 783 aa22.57■■□□□ 1.2
ERCC2-201ENST00000391941 SSFA2P28290 1259 aa22.57■■□□□ 1.2
ERCC2-201ENST00000391941 ADGRB2O60241 1585 aa22.57■■□□□ 1.2
ERCC2-201ENST00000391941 LMTK2Q8IWU2 1503 aa22.56■■□□□ 1.2
ERCC2-201ENST00000391941 TULP4Q9NRJ4 1543 aa22.56■■□□□ 1.2
ERCC2-201ENST00000391941 NSD2O96028 1365 aa22.56■■□□□ 1.2
ERCC2-201ENST00000391941 APBB1O00213 710 aa22.56■■□□□ 1.2
ERCC2-201ENST00000391941 CHAMP1Q96JM3 812 aa22.56■■□□□ 1.2
ERCC2-201ENST00000391941 PHACTR3Q96KR7 559 aa22.56■■□□□ 1.2
ERCC2-201ENST00000391941 MRE11P49959 708 aa22.55■■□□□ 1.2
ERCC2-201ENST00000391941 KIDINS220Q9ULH0 1771 aa22.55■■□□□ 1.2
ERCC2-201ENST00000391941 GAS2L2Q8NHY3 880 aa22.54■■□□□ 1.2
ERCC2-201ENST00000391941 PPLO60437 1756 aa22.54■■□□□ 1.2
ERCC2-201ENST00000391941 PRKAR2BP31323 418 aa22.54■■□□□ 1.2
ERCC2-201ENST00000391941 TBC1D9Q6ZT07 1266 aa22.53■■□□□ 1.2
ERCC2-201ENST00000391941 DDIT3P35638 169 aa22.53■■□□□ 1.2
ERCC2-201ENST00000391941 CLCN1P35523 988 aa22.52■■□□□ 1.2
ERCC2-201ENST00000391941 SIRT2Q8IXJ6 389 aa22.52■■□□□ 1.2
ERCC2-201ENST00000391941 RPGRIP1LQ68CZ1 1315 aa22.52■■□□□ 1.19
ERCC2-201ENST00000391941 DDX11L8A8MPP1 907 aa22.51■■□□□ 1.19
ERCC2-201ENST00000391941 DIAPH1O60610 1272 aaKnown RBP22.51■■□□□ 1.19
ERCC2-201ENST00000391941 PRAM1Q96QH2 718 aa22.51■■□□□ 1.19
ERCC2-201ENST00000391941 ESPNB1AK53 854 aa22.51■■□□□ 1.19
ERCC2-201ENST00000391941 RBM25P49756 843 aaKnown RBP22.51■■□□□ 1.19
ERCC2-201ENST00000391941 C16orf71Q8IYS4 520 aaPredicted RBP22.51■■□□□ 1.19
ERCC2-201ENST00000391941 GLI2P10070 1586 aa22.5■■□□□ 1.19
ERCC2-201ENST00000391941 PUS7Q96PZ0 661 aaKnown RBP22.5■■□□□ 1.19
ERCC2-201ENST00000391941 PKP1Q13835 747 aa22.49■■□□□ 1.19
ERCC2-201ENST00000391941 DCTN1Q14203 1278 aa22.49■■□□□ 1.19
ERCC2-201ENST00000391941 PPIP5K1Q6PFW1 1433 aa22.49■■□□□ 1.19
ERCC2-201ENST00000391941 RAPGEF3O95398 923 aa22.49■■□□□ 1.19
ERCC2-201ENST00000391941 ABCC11Q96J66 1382 aa22.49■■□□□ 1.19
ERCC2-201ENST00000391941 FAM83GA6ND36 823 aa22.48■■□□□ 1.19
ERCC2-201ENST00000391941 CABP1Q9NZU7 370 aa22.48■■□□□ 1.19
ERCC2-201ENST00000391941 ZBTB7BO15156 539 aaPredicted RBP22.48■■□□□ 1.19
ERCC2-201ENST00000391941 NCLP19338 710 aaKnown RBP22.47■■□□□ 1.19
ERCC2-201ENST00000391941 OTUD7AQ8TE49 926 aaPredicted RBP22.47■■□□□ 1.19
ERCC2-201ENST00000391941 ZRANB1Q9UGI0 708 aa22.47■■□□□ 1.19
ERCC2-201ENST00000391941 VGFO15240 615 aaPredicted RBP22.47■■□□□ 1.19
ERCC2-201ENST00000391941 IDI1Q13907 227 aa22.47■■□□□ 1.19
ERCC2-201ENST00000391941 RAB3GAP1Q15042 981 aa22.47■■□□□ 1.19
ERCC2-201ENST00000391941 TRIM44Q96DX7 344 aaPredicted RBP22.47■■□□□ 1.19
ERCC2-201ENST00000391941 ASXL2Q76L83 1435 aa22.46■■□□□ 1.19
ERCC2-201ENST00000391941 AK9Q5TCS8 1911 aa22.46■■□□□ 1.19
ERCC2-201ENST00000391941 COL3A1P02461 1466 aaPredicted RBP22.46■■□□□ 1.19
ERCC2-201ENST00000391941 IL16Q14005 1332 aa22.46■■□□□ 1.19
ERCC2-201ENST00000391941 KIF16BQ96L93 1317 aa22.46■■□□□ 1.19
ERCC2-201ENST00000391941 IPO8O15397 1037 aaKnown RBP22.46■■□□□ 1.19
ERCC2-201ENST00000391941 FOXD4L5Q5VV16 416 aaPredicted RBP22.46■■□□□ 1.19
ERCC2-201ENST00000391941 FOXD4L4Q8WXT5 416 aaPredicted RBP22.46■■□□□ 1.19
ERCC2-201ENST00000391941 KRT24Q2M2I5 525 aa22.44■■□□□ 1.18
ERCC2-201ENST00000391941 NCOA3Q9Y6Q9 1424 aa22.44■■□□□ 1.18
ERCC2-201ENST00000391941 ARHGEF28Q8N1W1 1705 aaKnown RBP22.44■■□□□ 1.18
ERCC2-201ENST00000391941 GSPT1P15170 499 aaKnown RBP22.44■■□□□ 1.18
ERCC2-201ENST00000391941 EMILIN1Q9Y6C2 1016 aa22.44■■□□□ 1.18
ERCC2-201ENST00000391941 BMP2KLQ5H9B9 411 aa22.43■■□□□ 1.18
ERCC2-201ENST00000391941 K7ELQ4 463 aaPredicted RBP22.43■■□□□ 1.18
ERCC2-201ENST00000391941 VAMP4O75379 141 aa22.42■■□□□ 1.18
ERCC2-201ENST00000391941 SNX21Q969T3 373 aa22.42■■□□□ 1.18
ERCC2-201ENST00000391941 GBP4Q96PP9 640 aa22.42■■□□□ 1.18
ERCC2-201ENST00000391941 C8orf58Q8NAV2 365 aa22.42■■□□□ 1.18
ERCC2-201ENST00000391941 VSIG10Q8N0Z9 540 aa22.41■■□□□ 1.18
ERCC2-201ENST00000391941 FRMPD1Q5SYB0 1578 aa22.41■■□□□ 1.18
ERCC2-201ENST00000391941 SMARCA5O60264 1052 aaPredicted RBP22.41■■□□□ 1.18
ERCC2-201ENST00000391941 DDX49Q9Y6V7 483 aaKnown RBP22.41■■□□□ 1.18
ERCC2-201ENST00000391941 MCTP1Q6DN14 999 aa22.4■■□□□ 1.18
ERCC2-201ENST00000391941 MRPL50Q8N5N7 158 aaKnown RBP22.4■■□□□ 1.18
ERCC2-201ENST00000391941 CAMSAP1Q5T5Y3 1602 aa22.4■■□□□ 1.18
ERCC2-201ENST00000391941 ZBTB7CA1YPR0 619 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms