RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 FGD5Q6ZNL6 1462 aa3.94□□□□□ -1.78
TRAV41-201ENST00000390468 SKOR1P84550 965 aa3.94□□□□□ -1.78
TRAV41-201ENST00000390468 LCE2CQ5TA81 110 aa3.94□□□□□ -1.78
TRAV41-201ENST00000390468 EHBP1Q8NDI1 1231 aa3.94□□□□□ -1.78
TRAV41-201ENST00000390468 WASF2Q9Y6W5 498 aa3.94□□□□□ -1.78
TRAV41-201ENST00000390468 TOPBP1Q92547 1522 aa3.94□□□□□ -1.78
TRAV41-201ENST00000390468 ERCC6Q03468 1493 aa3.93□□□□□ -1.78
TRAV41-201ENST00000390468 WIPF1O43516 503 aa3.93□□□□□ -1.78
TRAV41-201ENST00000390468 DXOO77932 396 aaKnown RBP3.93□□□□□ -1.78
TRAV41-201ENST00000390468 CD46P15529 392 aa3.93□□□□□ -1.78
TRAV41-201ENST00000390468 MMP16P51512 607 aa3.93□□□□□ -1.78
TRAV41-201ENST00000390468 SLC16A10Q8TF71 515 aa3.93□□□□□ -1.78
TRAV41-201ENST00000390468 KIFC2Q96AC6 838 aa3.93□□□□□ -1.78
TRAV41-201ENST00000390468 WDR62O43379 1518 aa3.93□□□□□ -1.78
TRAV41-201ENST00000390468 MRC2Q9UBG0 1479 aa3.92□□□□□ -1.78
TRAV41-201ENST00000390468 ABCA5Q8WWZ7 1642 aa3.92□□□□□ -1.78
TRAV41-201ENST00000390468 URB2Q14146 1524 aaKnown RBP3.92□□□□□ -1.78
TRAV41-201ENST00000390468 CAPN5O15484 640 aaPredicted RBP3.92□□□□□ -1.78
TRAV41-201ENST00000390468 LINC01559Q495D7 138 aa3.92□□□□□ -1.78
TRAV41-201ENST00000390468 SOGA1O94964 1423 aa3.92□□□□□ -1.78
TRAV41-201ENST00000390468 POLA1P09884 1462 aaPredicted RBP3.92□□□□□ -1.78
TRAV41-201ENST00000390468 TARBP1Q13395 1621 aaKnown RBP3.92□□□□□ -1.78
TRAV41-201ENST00000390468 RUSC2Q8N2Y8 1516 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 C6orf229H3BNL8 230 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 HOXA2O43364 376 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 JUNDP17535 347 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 GMPRP36959 345 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 WNT7BP56706 349 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 PTCRAQ6ISU1 281 aaPredicted RBP3.91□□□□□ -1.78
TRAV41-201ENST00000390468 NUTM1Q86Y26 1132 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 KRI1Q8N9T8 703 aaKnown RBP3.91□□□□□ -1.78
TRAV41-201ENST00000390468 NUDT12Q9BQG2 462 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 ANP32EQ9BTT0 268 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 TLL2Q9Y6L7 1015 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 GOLGA3Q08378 1498 aa3.91□□□□□ -1.78
TRAV41-201ENST00000390468 ACIN1Q9UKV3 1341 aaKnown RBP3.91□□□□□ -1.78
TRAV41-201ENST00000390468 ERICH3Q5RHP9 1530 aa3.9□□□□□ -1.78
TRAV41-201ENST00000390468 EIF4G3O43432 1585 aaKnown RBP3.9□□□□□ -1.78
TRAV41-201ENST00000390468 KIF27Q86VH2 1401 aa3.9□□□□□ -1.78
TRAV41-201ENST00000390468 FAM181BA6NEQ2 426 aa3.9□□□□□ -1.79
TRAV41-201ENST00000390468 MAP2K5Q13163 448 aa3.9□□□□□ -1.79
TRAV41-201ENST00000390468 TRIM46Q7Z4K8 759 aa3.9□□□□□ -1.79
TRAV41-201ENST00000390468 NXF1Q9UBU9 619 aaKnown RBP3.9□□□□□ -1.79
TRAV41-201ENST00000390468 CUX2O14529 1486 aa3.9□□□□□ -1.79
TRAV41-201ENST00000390468 ABCA10Q8WWZ4 1543 aa3.9□□□□□ -1.79
TRAV41-201ENST00000390468 SOBPA7XYQ1 873 aa3.89□□□□□ -1.79
TRAV41-201ENST00000390468 USP46P62068 366 aa3.89□□□□□ -1.79
TRAV41-201ENST00000390468 ZSCAN1Q8NBB4 408 aa3.89□□□□□ -1.79
TRAV41-201ENST00000390468 IRF7Q92985 503 aa3.89□□□□□ -1.79
TRAV41-201ENST00000390468 RAD54L2Q9Y4B4 1467 aa3.89□□□□□ -1.79
TRAV41-201ENST00000390468 CHD1O14646 1710 aa3.89□□□□□ -1.79
TRAV41-201ENST00000390468 TULP1O00294 542 aaPredicted RBP3.88□□□□□ -1.79
TRAV41-201ENST00000390468 IRF6O14896 467 aa3.88□□□□□ -1.79
TRAV41-201ENST00000390468 FDX1P10109 184 aa3.88□□□□□ -1.79
TRAV41-201ENST00000390468 MS4A1P11836 297 aa3.88□□□□□ -1.79
TRAV41-201ENST00000390468 SH3BP2P78314 561 aa3.88□□□□□ -1.79
TRAV41-201ENST00000390468 RETREG3Q86VR2 466 aa3.88□□□□□ -1.79
TRAV41-201ENST00000390468 PPARGC1BQ86YN6 1023 aaKnown RBP3.88□□□□□ -1.79
TRAV41-201ENST00000390468 CCDC102AQ96A19 550 aa3.88□□□□□ -1.79
TRAV41-201ENST00000390468 ZFP42Q96MM3 310 aa3.88□□□□□ -1.79
TRAV41-201ENST00000390468 ADAMTS12P58397 1594 aa3.88□□□□□ -1.79
TRAV41-201ENST00000390468 CCNYL3P0C7X3 344 aa3.87□□□□□ -1.79
TRAV41-201ENST00000390468 ARID5BQ14865 1188 aa3.87□□□□□ -1.79
TRAV41-201ENST00000390468 BAP1Q92560 729 aa3.87□□□□□ -1.79
TRAV41-201ENST00000390468 PURBQ96QR8 312 aaKnown RBP3.87□□□□□ -1.79
TRAV41-201ENST00000390468 UNC93B1Q9H1C4 597 aa3.87□□□□□ -1.79
TRAV41-201ENST00000390468 GPCPD1Q9NPB8 672 aa3.87□□□□□ -1.79
TRAV41-201ENST00000390468 ERBB4Q15303 1308 aa3.87□□□□□ -1.79
TRAV41-201ENST00000390468 GAPVD1Q14C86 1478 aa3.86□□□□□ -1.79
TRAV41-201ENST00000390468 IFT140Q96RY7 1462 aa3.86□□□□□ -1.79
TRAV41-201ENST00000390468 LOC105371045A0A1W2PR82 267 aa3.86□□□□□ -1.79
TRAV41-201ENST00000390468 SIAH2O43255 324 aa3.86□□□□□ -1.79
TRAV41-201ENST00000390468 NDUFV2P19404 249 aa3.86□□□□□ -1.79
TRAV41-201ENST00000390468 CTHP32929 405 aa3.86□□□□□ -1.79
TRAV41-201ENST00000390468 CLCN1P35523 988 aa3.86□□□□□ -1.79
TRAV41-201ENST00000390468 NNTQ13423 1086 aa3.86□□□□□ -1.79
TRAV41-201ENST00000390468 FAM217BQ9NTX9 383 aaPredicted RBP3.86□□□□□ -1.79
TRAV41-201ENST00000390468 GTF3C3Q9Y5Q9 886 aa3.86□□□□□ -1.79
TRAV41-201ENST00000390468 RAPGEF2Q9Y4G8 1499 aa3.86□□□□□ -1.79
TRAV41-201ENST00000390468 H3BM21 787 aa3.85□□□□□ -1.79
TRAV41-201ENST00000390468 WDR4P57081 412 aaKnown RBP3.85□□□□□ -1.79
TRAV41-201ENST00000390468 SCARF1Q14162 830 aa3.85□□□□□ -1.79
TRAV41-201ENST00000390468 TTLL12Q14166 644 aaPredicted RBP3.85□□□□□ -1.79
TRAV41-201ENST00000390468 C6orf118Q5T5N4 469 aa3.85□□□□□ -1.79
TRAV41-201ENST00000390468 MRPL14Q6P1L8 145 aaKnown RBP3.85□□□□□ -1.79
TRAV41-201ENST00000390468 PCGF6Q9BYE7 350 aa3.85□□□□□ -1.79
TRAV41-201ENST00000390468 PCDHGC3Q9UN70 934 aa3.85□□□□□ -1.79
TRAV41-201ENST00000390468 MINK1Q8N4C8 1332 aaPredicted RBP3.85□□□□□ -1.79
TRAV41-201ENST00000390468 PRXQ9BXM0 1461 aa3.85□□□□□ -1.79
TRAV41-201ENST00000390468 PLEKHG3A1L390 1219 aa3.84□□□□□ -1.79
TRAV41-201ENST00000390468 UBTFP17480 764 aaKnown RBP3.84□□□□□ -1.79
TRAV41-201ENST00000390468 AGERQ15109 404 aa3.84□□□□□ -1.79
TRAV41-201ENST00000390468 ZNF511Q8NB15 262 aa3.84□□□□□ -1.79
TRAV41-201ENST00000390468 PRR7Q8TB68 274 aa3.84□□□□□ -1.79
TRAV41-201ENST00000390468 CLSPNQ9HAW4 1339 aa3.84□□□□□ -1.79
TRAV41-201ENST00000390468 TNIKQ9UKE5 1360 aa3.84□□□□□ -1.79
TRAV41-201ENST00000390468 CEP162Q5TB80 1403 aa3.84□□□□□ -1.79
TRAV41-201ENST00000390468 LRRIQ1Q96JM4 1722 aa3.84□□□□□ -1.8
TRAV41-201ENST00000390468 MOXD2PA6NHM9 499 aa3.83□□□□□ -1.8
TRAV41-201ENST00000390468 MAN1A2O60476 641 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms