RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 IQGAP1P46940 1657 aa15.59■□□□□ 0.09
PRPF40B-202ENST00000380281 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
PRPF40B-202ENST00000380281 NCKAP5LQ9HCH0 1330 aa15.58■□□□□ 0.09
PRPF40B-202ENST00000380281 ATP7AQ04656 1500 aa15.58■□□□□ 0.08
PRPF40B-202ENST00000380281 ZFYVE16Q7Z3T8 1539 aa15.58■□□□□ 0.08
PRPF40B-202ENST00000380281 TPM2P07951 284 aa15.58■□□□□ 0.08
PRPF40B-202ENST00000380281 DDX19BQ9UMR2 479 aa15.58■□□□□ 0.08
PRPF40B-202ENST00000380281 PHACTR3Q96KR7 559 aa15.58■□□□□ 0.08
PRPF40B-202ENST00000380281 RNF17Q9BXT8 1623 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-202ENST00000380281 FAM83GA6ND36 823 aa15.57■□□□□ 0.08
PRPF40B-202ENST00000380281 ATAD2Q6PL18 1390 aa15.57■□□□□ 0.08
PRPF40B-202ENST00000380281 LAMC1P11047 1609 aa15.57■□□□□ 0.08
PRPF40B-202ENST00000380281 FAM13BQ9NYF5 915 aa15.57■□□□□ 0.08
PRPF40B-202ENST00000380281 TPRNQ4KMQ1 711 aa15.57■□□□□ 0.08
PRPF40B-202ENST00000380281 NGEFQ8N5V2 710 aa15.57■□□□□ 0.08
PRPF40B-202ENST00000380281 EMILIN1Q9Y6C2 1016 aa15.57■□□□□ 0.08
PRPF40B-202ENST00000380281 MYOM1P52179 1685 aa15.56■□□□□ 0.08
PRPF40B-202ENST00000380281 A0A1W2PP64 1363 aa15.56■□□□□ 0.08
PRPF40B-202ENST00000380281 SPHKAPQ2M3C7 1700 aa15.56■□□□□ 0.08
PRPF40B-202ENST00000380281 ABCA6Q8N139 1617 aa15.56■□□□□ 0.08
PRPF40B-202ENST00000380281 CDK19Q9BWU1 502 aa15.55■□□□□ 0.08
PRPF40B-202ENST00000380281 RRS1Q15050 365 aaKnown RBP15.55■□□□□ 0.08
PRPF40B-202ENST00000380281 TERF2IPQ9NYB0 399 aa15.55■□□□□ 0.08
PRPF40B-202ENST00000380281 NPATQ14207 1427 aa15.55■□□□□ 0.08
PRPF40B-202ENST00000380281 FGD1P98174 961 aa15.55■□□□□ 0.08
PRPF40B-202ENST00000380281 NCLP19338 710 aaKnown RBP15.53■□□□□ 0.08
PRPF40B-202ENST00000380281 KRT24Q2M2I5 525 aa15.53■□□□□ 0.08
PRPF40B-202ENST00000380281 HDGFL2Q7Z4V5 671 aaPredicted RBP15.53■□□□□ 0.08
PRPF40B-202ENST00000380281 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
PRPF40B-202ENST00000380281 RTEL1-TNFRSF6BF6WH68 1400 aa15.53■□□□□ 0.08
PRPF40B-202ENST00000380281 ASXL2Q76L83 1435 aa15.53■□□□□ 0.08
PRPF40B-202ENST00000380281 FOXD4L5Q5VV16 416 aaPredicted RBP15.53■□□□□ 0.08
PRPF40B-202ENST00000380281 FOXD4L4Q8WXT5 416 aaPredicted RBP15.53■□□□□ 0.08
PRPF40B-202ENST00000380281 ZHX1Q9UKY1 873 aaPredicted RBP15.53■□□□□ 0.08
PRPF40B-202ENST00000380281 PRDM10Q9NQV6 1147 aa15.52■□□□□ 0.08
PRPF40B-202ENST00000380281 GAS2L3Q86XJ1 694 aa15.52■□□□□ 0.08
PRPF40B-202ENST00000380281 CHMP5Q9NZZ3 219 aa15.52■□□□□ 0.08
PRPF40B-202ENST00000380281 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.07
PRPF40B-202ENST00000380281 CD2BP2O95400 341 aaKnown RBP15.52■□□□□ 0.07
PRPF40B-202ENST00000380281 PLEKHF1Q96S99 279 aa15.51■□□□□ 0.07
PRPF40B-202ENST00000380281 CEP152O94986 1710 aa15.51■□□□□ 0.07
PRPF40B-202ENST00000380281 CHD1LQ86WJ1 897 aa15.51■□□□□ 0.07
PRPF40B-202ENST00000380281 MAP3K4Q9Y6R4 1608 aa15.51■□□□□ 0.07
PRPF40B-202ENST00000380281 ZBTB40Q9NUA8 1239 aa15.5■□□□□ 0.07
PRPF40B-202ENST00000380281 NME9Q86XW9 330 aa15.5■□□□□ 0.07
PRPF40B-202ENST00000380281 C16orf71Q8IYS4 520 aaPredicted RBP15.5■□□□□ 0.07
PRPF40B-202ENST00000380281 CD109Q6YHK3 1445 aa15.5■□□□□ 0.07
PRPF40B-202ENST00000380281 ZNF518AQ6AHZ1 1483 aa15.5■□□□□ 0.07
PRPF40B-202ENST00000380281 ANKRD36BQ8N2N9 1353 aa15.49■□□□□ 0.07
PRPF40B-202ENST00000380281 NINLQ9Y2I6 1382 aa15.49■□□□□ 0.07
PRPF40B-202ENST00000380281 CCDC27Q2M243 656 aa15.49■□□□□ 0.07
PRPF40B-202ENST00000380281 MIS18AQ9NYP9 233 aa15.49■□□□□ 0.07
PRPF40B-202ENST00000380281 ZBTB7CA1YPR0 619 aa15.48■□□□□ 0.07
PRPF40B-202ENST00000380281 NOL8Q76FK4 1167 aaKnown RBP15.47■□□□□ 0.07
PRPF40B-202ENST00000380281 NLRP1Q9C000 1473 aa15.47■□□□□ 0.07
PRPF40B-202ENST00000380281 SMARCA5O60264 1052 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-202ENST00000380281 TXNDC2Q86VQ3 553 aa15.47■□□□□ 0.07
PRPF40B-202ENST00000380281 C8orf58Q8NAV2 365 aa15.47■□□□□ 0.07
PRPF40B-202ENST00000380281 R3HCC1Q9Y3T6 440 aaKnown RBP15.47■□□□□ 0.07
PRPF40B-202ENST00000380281 CLASP1Q7Z460 1538 aa15.47■□□□□ 0.07
PRPF40B-202ENST00000380281 FOXD4L6Q3SYB3 417 aaPredicted RBP15.46■□□□□ 0.07
PRPF40B-202ENST00000380281 FOXD4L3Q6VB84 417 aaPredicted RBP15.46■□□□□ 0.07
PRPF40B-202ENST00000380281 NECTIN2Q92692 538 aa15.46■□□□□ 0.07
PRPF40B-202ENST00000380281 TNPO1Q92973 898 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-202ENST00000380281 TET3O43151 1660 aa15.46■□□□□ 0.07
PRPF40B-202ENST00000380281 SMC5Q8IY18 1101 aa15.46■□□□□ 0.07
PRPF40B-202ENST00000380281 CHAMP1Q96JM3 812 aa15.46■□□□□ 0.07
PRPF40B-202ENST00000380281 POLKQ9UBT6 870 aa15.46■□□□□ 0.07
PRPF40B-202ENST00000380281 MROH2AA6NES4 1674 aa15.46■□□□□ 0.06
PRPF40B-202ENST00000380281 HDAC1Q13547 482 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-202ENST00000380281 SLC4A10Q6U841 1118 aa15.45■□□□□ 0.06
PRPF40B-202ENST00000380281 OTUD7AQ8TE49 926 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-202ENST00000380281 KIF16BQ96L93 1317 aa15.45■□□□□ 0.06
PRPF40B-202ENST00000380281 TWISTNBQ3B726 338 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-202ENST00000380281 NUCB1Q02818 461 aa15.44■□□□□ 0.06
PRPF40B-202ENST00000380281 TBC1D9Q6ZT07 1266 aa15.44■□□□□ 0.06
PRPF40B-202ENST00000380281 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
PRPF40B-202ENST00000380281 KIF1BO60333 1816 aa15.44■□□□□ 0.06
PRPF40B-202ENST00000380281 SSFA2P28290 1259 aa15.44■□□□□ 0.06
PRPF40B-202ENST00000380281 AEBP1Q8IUX7 1158 aa15.43■□□□□ 0.06
PRPF40B-202ENST00000380281 PDE4CQ08493 712 aa15.43■□□□□ 0.06
PRPF40B-202ENST00000380281 MYOM2P54296 1465 aa15.43■□□□□ 0.06
PRPF40B-202ENST00000380281 VAMP4O75379 141 aa15.42■□□□□ 0.06
PRPF40B-202ENST00000380281 TSHZ3Q63HK5 1081 aa15.42■□□□□ 0.06
PRPF40B-202ENST00000380281 CYB5RLQ6IPT4 315 aa15.42■□□□□ 0.06
PRPF40B-202ENST00000380281 MCM10Q7L590 875 aa15.42■□□□□ 0.06
PRPF40B-202ENST00000380281 SIRT2Q8IXJ6 389 aa15.42■□□□□ 0.06
PRPF40B-202ENST00000380281 SBNO2Q9Y2G9 1366 aa15.42■□□□□ 0.06
PRPF40B-202ENST00000380281 PPRC1Q5VV67 1664 aaKnown RBP15.42■□□□□ 0.06
PRPF40B-202ENST00000380281 ZBTB7BO15156 539 aaPredicted RBP15.42■□□□□ 0.06
PRPF40B-202ENST00000380281 OFD1O75665 1012 aa15.41■□□□□ 0.06
PRPF40B-202ENST00000380281 MSNP26038 577 aaKnown RBP15.41■□□□□ 0.06
PRPF40B-202ENST00000380281 GAS2L2Q8NHY3 880 aa15.41■□□□□ 0.06
PRPF40B-202ENST00000380281 IQSEC2Q5JU85 1478 aa15.41■□□□□ 0.06
PRPF40B-202ENST00000380281 EFCAB6Q5THR3 1501 aa15.4■□□□□ 0.06
PRPF40B-202ENST00000380281 FCHSD2O94868 740 aa15.4■□□□□ 0.06
PRPF40B-202ENST00000380281 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
PRPF40B-202ENST00000380281 ZSCAN30Q86W11 494 aa15.4■□□□□ 0.06
PRPF40B-202ENST00000380281 RPGRIP1LQ68CZ1 1315 aa15.4■□□□□ 0.06
PRPF40B-202ENST00000380281 SHROOM2Q13796 1616 aa15.39■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms