RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 TMEM57Q8N5G2 664 aa11.83□□□□□ -0.52
NHLRC3-202ENST00000379600 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
NHLRC3-202ENST00000379600 TMPOP42166 694 aaKnown RBP11.82□□□□□ -0.52
NHLRC3-202ENST00000379600 ITPRIPQ8IWB1 547 aa11.82□□□□□ -0.52
NHLRC3-202ENST00000379600 NSD2O96028 1365 aa11.82□□□□□ -0.52
NHLRC3-202ENST00000379600 CHGAP10645 457 aaKnown RBP11.82□□□□□ -0.52
NHLRC3-202ENST00000379600 RBM25P49756 843 aaKnown RBP11.82□□□□□ -0.52
NHLRC3-202ENST00000379600 CFAP74Q9C0B2 1584 aa11.82□□□□□ -0.52
NHLRC3-202ENST00000379600 KIF2CQ99661 725 aa11.82□□□□□ -0.52
NHLRC3-202ENST00000379600 ANKRD26Q9UPS8 1709 aa11.82□□□□□ -0.52
NHLRC3-202ENST00000379600 CLCN1P35523 988 aa11.81□□□□□ -0.52
NHLRC3-202ENST00000379600 DDX19BQ9UMR2 479 aa11.81□□□□□ -0.52
NHLRC3-202ENST00000379600 ERBB4Q15303 1308 aa11.81□□□□□ -0.52
NHLRC3-202ENST00000379600 A0A1W2PP64 1363 aa11.81□□□□□ -0.52
NHLRC3-202ENST00000379600 NUCB1Q02818 461 aa11.81□□□□□ -0.52
NHLRC3-202ENST00000379600 CABP2Q9NPB3 220 aa11.81□□□□□ -0.52
NHLRC3-202ENST00000379600 PIK3C2BO00750 1634 aa11.8□□□□□ -0.52
NHLRC3-202ENST00000379600 NEXMIFQ5QGS0 1516 aa11.8□□□□□ -0.52
NHLRC3-202ENST00000379600 ABCC11Q96J66 1382 aa11.8□□□□□ -0.52
NHLRC3-202ENST00000379600 HECW2Q9P2P5 1572 aa11.8□□□□□ -0.52
NHLRC3-202ENST00000379600 CD2BP2O95400 341 aaKnown RBP11.8□□□□□ -0.52
NHLRC3-202ENST00000379600 GAS2L3Q86XJ1 694 aa11.8□□□□□ -0.52
NHLRC3-202ENST00000379600 CD163L1Q9NR16 1453 aa11.79□□□□□ -0.52
NHLRC3-202ENST00000379600 MRE11P49959 708 aa11.79□□□□□ -0.52
NHLRC3-202ENST00000379600 TNPO1Q92973 898 aaKnown RBP11.79□□□□□ -0.52
NHLRC3-202ENST00000379600 SNX21Q969T3 373 aa11.79□□□□□ -0.52
NHLRC3-202ENST00000379600 PUS7Q96PZ0 661 aaKnown RBP11.79□□□□□ -0.52
NHLRC3-202ENST00000379600 GRPEL1Q9HAV7 217 aa11.79□□□□□ -0.52
NHLRC3-202ENST00000379600 NUTM2DQ5VT03 806 aaPredicted RBP11.79□□□□□ -0.52
NHLRC3-202ENST00000379600 HSCBQ8IWL3 235 aa11.79□□□□□ -0.52
NHLRC3-202ENST00000379600 EVC2Q86UK5 1308 aa11.79□□□□□ -0.52
NHLRC3-202ENST00000379600 MED14O60244 1454 aa11.78□□□□□ -0.52
NHLRC3-202ENST00000379600 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
NHLRC3-202ENST00000379600 LNPKQ9C0E8 428 aa11.78□□□□□ -0.52
NHLRC3-202ENST00000379600 GGNBP2Q9H3C7 697 aa11.78□□□□□ -0.52
NHLRC3-202ENST00000379600 IL16Q14005 1332 aa11.77□□□□□ -0.52
NHLRC3-202ENST00000379600 ABCC3O15438 1527 aa11.77□□□□□ -0.52
NHLRC3-202ENST00000379600 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.53
NHLRC3-202ENST00000379600 DDX11L8A8MPP1 907 aa11.77□□□□□ -0.53
NHLRC3-202ENST00000379600 RAB3GAP1Q15042 981 aa11.76□□□□□ -0.53
NHLRC3-202ENST00000379600 CHD1LQ86WJ1 897 aa11.76□□□□□ -0.53
NHLRC3-202ENST00000379600 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
NHLRC3-202ENST00000379600 RPGRIP1LQ68CZ1 1315 aa11.76□□□□□ -0.53
NHLRC3-202ENST00000379600 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
NHLRC3-202ENST00000379600 RIPK4P57078 832 aa11.75□□□□□ -0.53
NHLRC3-202ENST00000379600 SAFB2Q14151 953 aaKnown RBP eCLIP11.75□□□□□ -0.53
NHLRC3-202ENST00000379600 FYB1O15117 783 aa11.75□□□□□ -0.53
NHLRC3-202ENST00000379600 PNPLA6Q8IY17 1366 aa11.75□□□□□ -0.53
NHLRC3-202ENST00000379600 CLTCQ00610 1675 aaKnown RBP11.75□□□□□ -0.53
NHLRC3-202ENST00000379600 BMP2KLQ5H9B9 411 aa11.74□□□□□ -0.53
NHLRC3-202ENST00000379600 CDC42BPGQ6DT37 1551 aa11.74□□□□□ -0.53
NHLRC3-202ENST00000379600 MYO5BQ9ULV0 1848 aa11.74□□□□□ -0.53
NHLRC3-202ENST00000379600 NAP1L5Q96NT1 182 aaPredicted RBP11.74□□□□□ -0.53
NHLRC3-202ENST00000379600 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
NHLRC3-202ENST00000379600 KIF16BQ96L93 1317 aa11.74□□□□□ -0.53
NHLRC3-202ENST00000379600 ASXL2Q76L83 1435 aa11.74□□□□□ -0.53
NHLRC3-202ENST00000379600 SIRT2Q8IXJ6 389 aa11.74□□□□□ -0.53
NHLRC3-202ENST00000379600 PTPRMP28827 1452 aa11.74□□□□□ -0.53
NHLRC3-202ENST00000379600 AK9Q5TCS8 1911 aa11.73□□□□□ -0.53
NHLRC3-202ENST00000379600 KNDC1Q76NI1 1749 aa11.73□□□□□ -0.53
NHLRC3-202ENST00000379600 ZBTB7BO15156 539 aaPredicted RBP11.73□□□□□ -0.53
NHLRC3-202ENST00000379600 KIF20BQ96Q89 1820 aa11.73□□□□□ -0.53
NHLRC3-202ENST00000379600 ESPNB1AK53 854 aa11.73□□□□□ -0.53
NHLRC3-202ENST00000379600 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
NHLRC3-202ENST00000379600 GGT6Q6P531 493 aa11.73□□□□□ -0.53
NHLRC3-202ENST00000379600 C1orf115Q9H7X2 142 aa11.73□□□□□ -0.53
NHLRC3-202ENST00000379600 CIZ1Q9ULV3 898 aaPredicted RBP11.73□□□□□ -0.53
NHLRC3-202ENST00000379600 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
NHLRC3-202ENST00000379600 PIK3R4Q99570 1358 aa11.72□□□□□ -0.53
NHLRC3-202ENST00000379600 TBC1D9Q6ZT07 1266 aa11.72□□□□□ -0.53
NHLRC3-202ENST00000379600 BRPF1P55201 1214 aaPredicted RBP11.72□□□□□ -0.53
NHLRC3-202ENST00000379600 ISY1Q9ULR0 285 aaKnown RBP11.72□□□□□ -0.53
NHLRC3-202ENST00000379600 FAM135BQ49AJ0 1406 aa11.71□□□□□ -0.53
NHLRC3-202ENST00000379600 POGZQ7Z3K3 1410 aa11.71□□□□□ -0.53
NHLRC3-202ENST00000379600 GAS2L2Q8NHY3 880 aa11.71□□□□□ -0.53
NHLRC3-202ENST00000379600 PTCH1Q13635 1447 aa11.71□□□□□ -0.54
NHLRC3-202ENST00000379600 HSP90AB1P08238 724 aaKnown RBP11.71□□□□□ -0.54
NHLRC3-202ENST00000379600 IPO8O15397 1037 aaKnown RBP11.7□□□□□ -0.54
NHLRC3-202ENST00000379600 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
NHLRC3-202ENST00000379600 MLH3Q9UHC1 1453 aa11.7□□□□□ -0.54
NHLRC3-202ENST00000379600 FBLN1P23142 703 aa11.7□□□□□ -0.54
NHLRC3-202ENST00000379600 SSFA2P28290 1259 aa11.7□□□□□ -0.54
NHLRC3-202ENST00000379600 ANKRD45Q5TZF3 282 aa11.7□□□□□ -0.54
NHLRC3-202ENST00000379600 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
NHLRC3-202ENST00000379600 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
NHLRC3-202ENST00000379600 DIAPH1O60610 1272 aaKnown RBP11.69□□□□□ -0.54
NHLRC3-202ENST00000379600 THUMPD2Q9BTF0 503 aaKnown RBP11.69□□□□□ -0.54
NHLRC3-202ENST00000379600 K7ELQ4 463 aaPredicted RBP11.69□□□□□ -0.54
NHLRC3-202ENST00000379600 VAMP4O75379 141 aa11.69□□□□□ -0.54
NHLRC3-202ENST00000379600 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
NHLRC3-202ENST00000379600 STK26Q9P289 416 aa11.69□□□□□ -0.54
NHLRC3-202ENST00000379600 PHACTR3Q96KR7 559 aa11.69□□□□□ -0.54
NHLRC3-202ENST00000379600 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
NHLRC3-202ENST00000379600 GSPT1P15170 499 aaKnown RBP11.68□□□□□ -0.54
NHLRC3-202ENST00000379600 ARHGAP31Q2M1Z3 1444 aa11.68□□□□□ -0.54
NHLRC3-202ENST00000379600 CLEC17AQ6ZS10 378 aa11.68□□□□□ -0.54
NHLRC3-202ENST00000379600 GBP4Q96PP9 640 aa11.68□□□□□ -0.54
NHLRC3-202ENST00000379600 DLG5Q8TDM6 1919 aa11.68□□□□□ -0.54
NHLRC3-202ENST00000379600 ABCC4O15439 1325 aa11.68□□□□□ -0.54
NHLRC3-202ENST00000379600 GCC1Q96CN9 775 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms