RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 FYB1O15117 783 aa8.2□□□□□ -1.1
NEDD9-202ENST00000379446 RBM26Q5T8P6 1007 aaKnown RBP8.2□□□□□ -1.1
NEDD9-202ENST00000379446 NAP1L5Q96NT1 182 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-202ENST00000379446 UPF2Q9HAU5 1272 aaKnown RBP8.2□□□□□ -1.1
NEDD9-202ENST00000379446 FCHSD2O94868 740 aa8.19□□□□□ -1.1
NEDD9-202ENST00000379446 IBSPP21815 317 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-202ENST00000379446 TSPYL4Q9UJ04 414 aa8.19□□□□□ -1.1
NEDD9-202ENST00000379446 DPY19L2Q6NUT2 758 aa8.19□□□□□ -1.1
NEDD9-202ENST00000379446 EXOC6Q8TAG9 804 aa8.19□□□□□ -1.1
NEDD9-202ENST00000379446 RCAN3Q9UKA8 241 aa8.19□□□□□ -1.1
NEDD9-202ENST00000379446 HECW1Q76N89 1606 aa8.19□□□□□ -1.1
NEDD9-202ENST00000379446 ABCC5O15440 1437 aa8.19□□□□□ -1.1
NEDD9-202ENST00000379446 UGGT2Q9NYU1 1516 aa8.19□□□□□ -1.1
NEDD9-202ENST00000379446 CCNL1Q9UK58 526 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-202ENST00000379446 THOC2Q8NI27 1593 aaKnown RBP8.18□□□□□ -1.1
NEDD9-202ENST00000379446 NCOA1Q15788 1441 aa8.18□□□□□ -1.1
NEDD9-202ENST00000379446 ERBINQ96RT1 1412 aa8.18□□□□□ -1.1
NEDD9-202ENST00000379446 ATP6V1AP38606 617 aa8.18□□□□□ -1.1
NEDD9-202ENST00000379446 R3HDM1Q15032 1099 aaKnown RBP8.18□□□□□ -1.1
NEDD9-202ENST00000379446 RRS1Q15050 365 aaKnown RBP8.18□□□□□ -1.1
NEDD9-202ENST00000379446 CTTNBP2Q8WZ74 1663 aa8.18□□□□□ -1.1
NEDD9-202ENST00000379446 TMEM94Q12767 1356 aa8.18□□□□□ -1.1
NEDD9-202ENST00000379446 MYL6BP14649 208 aa8.18□□□□□ -1.1
NEDD9-202ENST00000379446 NF2P35240 595 aa8.18□□□□□ -1.1
NEDD9-202ENST00000379446 CCDC146Q8IYE0 955 aa8.18□□□□□ -1.1
NEDD9-202ENST00000379446 PKNOX2Q96KN3 472 aa8.18□□□□□ -1.1
NEDD9-202ENST00000379446 SPON1Q9HCB6 807 aa8.18□□□□□ -1.1
NEDD9-202ENST00000379446 RPGRIP1LQ68CZ1 1315 aa8.17□□□□□ -1.1
NEDD9-202ENST00000379446 CHMP4BP1P59074 171 aa8.17□□□□□ -1.1
NEDD9-202ENST00000379446 CHMP4BQ9H444 224 aaKnown RBP8.17□□□□□ -1.1
NEDD9-202ENST00000379446 RTCBQ9Y3I0 505 aaKnown RBP8.17□□□□□ -1.1
NEDD9-202ENST00000379446 MAGI3Q5TCQ9 1506 aa8.17□□□□□ -1.1
NEDD9-202ENST00000379446 SEPT12Q8IYM1 358 aa8.17□□□□□ -1.1
NEDD9-202ENST00000379446 SMARCC1Q92922 1105 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-202ENST00000379446 MARCH6O60337 910 aa8.17□□□□□ -1.1
NEDD9-202ENST00000379446 ZBTB7AO95365 584 aa8.17□□□□□ -1.1
NEDD9-202ENST00000379446 CCDC85AQ96PX6 553 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-202ENST00000379446 MPHOSPH8Q99549 860 aa8.17□□□□□ -1.1
NEDD9-202ENST00000379446 PANK3Q9H999 370 aa8.17□□□□□ -1.1
NEDD9-202ENST00000379446 KTN1Q86UP2 1357 aaKnown RBP8.17□□□□□ -1.1
NEDD9-202ENST00000379446 SULT6B1Q6IMI4 303 aa8.17□□□□□ -1.1
NEDD9-202ENST00000379446 ANKIB1Q9P2G1 1089 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 MYBBP1AQ9BQG0 1328 aaKnown RBP8.16□□□□□ -1.1
NEDD9-202ENST00000379446 ABCC2Q92887 1545 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 ST5P78524 1137 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 FAM196AQ6ZSG2 479 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 ATP2B2Q01814 1243 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 RALBP1Q15311 655 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 TPRNQ4KMQ1 711 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 STAC3Q96MF2 364 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 SLC12A5Q9H2X9 1139 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 MTMR7Q9Y216 660 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 KDM6BO15054 1643 aa8.16□□□□□ -1.1
NEDD9-202ENST00000379446 RPRD2Q5VT52 1461 aaKnown RBP8.15□□□□□ -1.1
NEDD9-202ENST00000379446 DHX29Q7Z478 1369 aaKnown RBP8.15□□□□□ -1.1
NEDD9-202ENST00000379446 GNPATO15228 680 aa8.15□□□□□ -1.1
NEDD9-202ENST00000379446 FKBP5Q13451 457 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-202ENST00000379446 PNISRQ8TF01 805 aaKnown RBP8.15□□□□□ -1.1
NEDD9-202ENST00000379446 RRP1P56182 461 aaKnown RBP8.15□□□□□ -1.1
NEDD9-202ENST00000379446 NBPF6Q5VWK0 638 aa8.15□□□□□ -1.1
NEDD9-202ENST00000379446 NBPF5PQ86XG9 351 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-202ENST00000379446 GAS2L2Q8NHY3 880 aa8.15□□□□□ -1.1
NEDD9-202ENST00000379446 NBPF4Q96M43 638 aa8.15□□□□□ -1.1
NEDD9-202ENST00000379446 TSPOAP1O95153 1857 aa8.15□□□□□ -1.11
NEDD9-202ENST00000379446 NBPF1Q3BBV0 1214 aa8.15□□□□□ -1.11
NEDD9-202ENST00000379446 CASC1Q6TDU7 716 aa8.15□□□□□ -1.11
NEDD9-202ENST00000379446 CDCA7LQ96GN5 454 aa8.15□□□□□ -1.11
NEDD9-202ENST00000379446 CNNM1Q9NRU3 951 aa8.15□□□□□ -1.11
NEDD9-202ENST00000379446 KIAA1107Q9UPP5 1409 aa8.15□□□□□ -1.11
NEDD9-202ENST00000379446 APPP05067 770 aa8.14□□□□□ -1.11
NEDD9-202ENST00000379446 RGS3P49796 1198 aa8.14□□□□□ -1.11
NEDD9-202ENST00000379446 ZCRB1Q8TBF4 217 aaKnown RBP8.14□□□□□ -1.11
NEDD9-202ENST00000379446 ANKRD24Q8TF21 1146 aa8.14□□□□□ -1.11
NEDD9-202ENST00000379446 YY1P25490 414 aa8.14□□□□□ -1.11
NEDD9-202ENST00000379446 TBX22Q9Y458 520 aa8.14□□□□□ -1.11
NEDD9-202ENST00000379446 WASLO00401 505 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-202ENST00000379446 NEUROD6Q96NK8 337 aa8.14□□□□□ -1.11
NEDD9-202ENST00000379446 ZNF518AQ6AHZ1 1483 aa8.14□□□□□ -1.11
NEDD9-202ENST00000379446 IPO8O15397 1037 aaKnown RBP8.13□□□□□ -1.11
NEDD9-202ENST00000379446 IL2RBP14784 551 aa8.13□□□□□ -1.11
NEDD9-202ENST00000379446 TCP11L2Q8N4U5 519 aa8.13□□□□□ -1.11
NEDD9-202ENST00000379446 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-202ENST00000379446 EN1Q05925 392 aaPredicted RBP8.13□□□□□ -1.11
NEDD9-202ENST00000379446 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
NEDD9-202ENST00000379446 ARID3AQ99856 593 aa8.13□□□□□ -1.11
NEDD9-202ENST00000379446 ABT1Q9ULW3 272 aaKnown RBP8.13□□□□□ -1.11
NEDD9-202ENST00000379446 ROCK1Q13464 1354 aa8.13□□□□□ -1.11
NEDD9-202ENST00000379446 ATP10AO60312 1499 aa8.13□□□□□ -1.11
NEDD9-202ENST00000379446 UBE2Q2Q8WVN8 375 aa8.13□□□□□ -1.11
NEDD9-202ENST00000379446 MS4A1P11836 297 aa8.12□□□□□ -1.11
NEDD9-202ENST00000379446 TMEM87AQ8NBN3 555 aa8.12□□□□□ -1.11
NEDD9-202ENST00000379446 A2MP01023 1474 aa8.12□□□□□ -1.11
NEDD9-202ENST00000379446 GPTP24298 496 aa8.12□□□□□ -1.11
NEDD9-202ENST00000379446 CHAF1AQ13111 956 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-202ENST00000379446 SKAP1Q86WV1 359 aa8.12□□□□□ -1.11
NEDD9-202ENST00000379446 OGFOD1Q8N543 542 aa8.12□□□□□ -1.11
NEDD9-202ENST00000379446 SETDB2Q96T68 719 aa8.12□□□□□ -1.11
NEDD9-202ENST00000379446 CCDC87Q9NVE4 849 aa8.12□□□□□ -1.11
NEDD9-202ENST00000379446 HDAC9Q9UKV0 1011 aa8.12□□□□□ -1.11
NEDD9-202ENST00000379446 CAMSAP2Q08AD1 1489 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms