RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 GZF1Q9H116 711 aaPredicted RBP20.31■□□□□ 0.84
ARHGEF1-204ENST00000378152 MYH16Q9H6N6 1097 aa20.31■□□□□ 0.84
ARHGEF1-204ENST00000378152 ZKSCAN2Q63HK3 967 aa20.3■□□□□ 0.84
ARHGEF1-204ENST00000378152 DZIP1LQ8IYY4 767 aaKnown RBP20.3■□□□□ 0.84
ARHGEF1-204ENST00000378152 ARHGEF28Q8N1W1 1705 aaKnown RBP20.3■□□□□ 0.84
ARHGEF1-204ENST00000378152 A2ML1A8K2U0 1454 aa20.29■□□□□ 0.84
ARHGEF1-204ENST00000378152 QRICH2Q9H0J4 1663 aa20.28■□□□□ 0.84
ARHGEF1-204ENST00000378152 VGFO15240 615 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF1-204ENST00000378152 L1TD1Q5T7N2 865 aaKnown RBP20.28■□□□□ 0.84
ARHGEF1-204ENST00000378152 NUTM2DQ5VT03 806 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF1-204ENST00000378152 RRAGDQ9NQL2 400 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF1-204ENST00000378152 CCDC27Q2M243 656 aa20.27■□□□□ 0.84
ARHGEF1-204ENST00000378152 FBXO31Q5XUX0 539 aaPredicted RBP20.27■□□□□ 0.84
ARHGEF1-204ENST00000378152 C22orf23Q9BZE7 217 aa20.27■□□□□ 0.84
ARHGEF1-204ENST00000378152 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
ARHGEF1-204ENST00000378152 SMC4Q9NTJ3 1288 aa20.27■□□□□ 0.84
ARHGEF1-204ENST00000378152 ZMYM3Q14202 1370 aa20.27■□□□□ 0.84
ARHGEF1-204ENST00000378152 SETD1AO15047 1707 aaKnown RBP20.26■□□□□ 0.83
ARHGEF1-204ENST00000378152 EXOSC9Q06265 439 aaKnown RBP20.25■□□□□ 0.83
ARHGEF1-204ENST00000378152 ITPRIPQ8IWB1 547 aa20.25■□□□□ 0.83
ARHGEF1-204ENST00000378152 U2SURPO15042 1029 aaKnown RBP20.25■□□□□ 0.83
ARHGEF1-204ENST00000378152 MCM4P33991 863 aa20.25■□□□□ 0.83
ARHGEF1-204ENST00000378152 SAFB2Q14151 953 aaKnown RBP eCLIP20.24■□□□□ 0.83
ARHGEF1-204ENST00000378152 TRIM27P14373 513 aa20.23■□□□□ 0.83
ARHGEF1-204ENST00000378152 RSPH6AQ9H0K4 717 aa20.23■□□□□ 0.83
ARHGEF1-204ENST00000378152 FER1L4A9Z1Z3 1794 aa20.23■□□□□ 0.83
ARHGEF1-204ENST00000378152 UBR1Q8IWV7 1749 aa20.23■□□□□ 0.83
ARHGEF1-204ENST00000378152 GOLGA6L3A6NEY3 463 aa20.22■□□□□ 0.83
ARHGEF1-204ENST00000378152 XRCC6P12956 609 aaKnown RBP eCLIP20.22■□□□□ 0.83
ARHGEF1-204ENST00000378152 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
ARHGEF1-204ENST00000378152 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
ARHGEF1-204ENST00000378152 PANK2Q9BZ23 570 aa20.21■□□□□ 0.83
ARHGEF1-204ENST00000378152 DNAJC5Q9H3Z4 198 aa20.21■□□□□ 0.83
ARHGEF1-204ENST00000378152 C3P01024 1663 aa20.21■□□□□ 0.83
ARHGEF1-204ENST00000378152 ALKQ9UM73 1620 aa20.21■□□□□ 0.83
ARHGEF1-204ENST00000378152 CHMP5Q9NZZ3 219 aa20.2■□□□□ 0.82
ARHGEF1-204ENST00000378152 NOB1Q9ULX3 412 aaKnown RBP20.19■□□□□ 0.82
ARHGEF1-204ENST00000378152 NRXN3Q9Y4C0 1643 aa20.19■□□□□ 0.82
ARHGEF1-204ENST00000378152 TNRQ92752 1358 aa20.18■□□□□ 0.82
ARHGEF1-204ENST00000378152 TRAK2O60296 914 aa20.18■□□□□ 0.82
ARHGEF1-204ENST00000378152 TMPOP42166 694 aaKnown RBP20.17■□□□□ 0.82
ARHGEF1-204ENST00000378152 MLECQ14165 292 aa20.17■□□□□ 0.82
ARHGEF1-204ENST00000378152 DDX19BQ9UMR2 479 aa20.17■□□□□ 0.82
ARHGEF1-204ENST00000378152 EVC2Q86UK5 1308 aa20.17■□□□□ 0.82
ARHGEF1-204ENST00000378152 RIMS2Q9UQ26 1411 aa20.17■□□□□ 0.82
ARHGEF1-204ENST00000378152 ATF7IPQ6VMQ6 1270 aa20.17■□□□□ 0.82
ARHGEF1-204ENST00000378152 TMEM57Q8N5G2 664 aa20.17■□□□□ 0.82
ARHGEF1-204ENST00000378152 PKNOX2Q96KN3 472 aa20.17■□□□□ 0.82
ARHGEF1-204ENST00000378152 GGNBP2Q9H3C7 697 aa20.17■□□□□ 0.82
ARHGEF1-204ENST00000378152 HDAC1Q13547 482 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF1-204ENST00000378152 HSCBQ8IWL3 235 aa20.16■□□□□ 0.82
ARHGEF1-204ENST00000378152 TRIM35Q9UPQ4 493 aa20.16■□□□□ 0.82
ARHGEF1-204ENST00000378152 DLC1Q96QB1 1528 aa20.16■□□□□ 0.82
ARHGEF1-204ENST00000378152 ANKRD36BQ8N2N9 1353 aa20.15■□□□□ 0.82
ARHGEF1-204ENST00000378152 FSD2A1L4K1 749 aa20.15■□□□□ 0.82
ARHGEF1-204ENST00000378152 ESF1Q9H501 851 aaKnown RBP20.15■□□□□ 0.82
ARHGEF1-204ENST00000378152 PLEKHF1Q96S99 279 aa20.14■□□□□ 0.82
ARHGEF1-204ENST00000378152 PTPRMP28827 1452 aa20.14■□□□□ 0.81
ARHGEF1-204ENST00000378152 LNPKQ9C0E8 428 aa20.13■□□□□ 0.81
ARHGEF1-204ENST00000378152 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
ARHGEF1-204ENST00000378152 PUS7Q96PZ0 661 aaKnown RBP20.13■□□□□ 0.81
ARHGEF1-204ENST00000378152 PLEKHG5O94827 1062 aa20.13■□□□□ 0.81
ARHGEF1-204ENST00000378152 CT47B1P0C2W7 299 aaPredicted RBP20.13■□□□□ 0.81
ARHGEF1-204ENST00000378152 STK26Q9P289 416 aa20.13■□□□□ 0.81
ARHGEF1-204ENST00000378152 USP32Q8NFA0 1604 aa20.13■□□□□ 0.81
ARHGEF1-204ENST00000378152 TRHP20396 242 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF1-204ENST00000378152 SMC5Q8IY18 1101 aa20.12■□□□□ 0.81
ARHGEF1-204ENST00000378152 TULP4Q9NRJ4 1543 aa20.12■□□□□ 0.81
ARHGEF1-204ENST00000378152 RIPK4P57078 832 aa20.12■□□□□ 0.81
ARHGEF1-204ENST00000378152 ADGRB2O60241 1585 aa20.12■□□□□ 0.81
ARHGEF1-204ENST00000378152 SRPK2P78362 688 aaKnown RBP20.11■□□□□ 0.81
ARHGEF1-204ENST00000378152 YTHDC2Q9H6S0 1430 aaKnown RBP20.1■□□□□ 0.81
ARHGEF1-204ENST00000378152 ZBTB40Q9NUA8 1239 aa20.1■□□□□ 0.81
ARHGEF1-204ENST00000378152 NSD2O96028 1365 aa20.1■□□□□ 0.81
ARHGEF1-204ENST00000378152 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
ARHGEF1-204ENST00000378152 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
ARHGEF1-204ENST00000378152 A0A1W2PP64 1363 aa20.08■□□□□ 0.81
ARHGEF1-204ENST00000378152 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.08■□□□□ 0.81
ARHGEF1-204ENST00000378152 FOXD4L1Q9NU39 408 aa20.07■□□□□ 0.8
ARHGEF1-204ENST00000378152 SLIT1O75093 1534 aa20.07■□□□□ 0.8
ARHGEF1-204ENST00000378152 NUCB1Q02818 461 aa20.07■□□□□ 0.8
ARHGEF1-204ENST00000378152 STAG3Q9UJ98 1225 aa20.06■□□□□ 0.8
ARHGEF1-204ENST00000378152 ADAMTSL3P82987 1691 aa20.06■□□□□ 0.8
ARHGEF1-204ENST00000378152 ARHGAP23Q9P227 1491 aa20.05■□□□□ 0.8
ARHGEF1-204ENST00000378152 TMEM2Q9UHN6 1383 aa20.05■□□□□ 0.8
ARHGEF1-204ENST00000378152 DDX11L8A8MPP1 907 aa20.05■□□□□ 0.8
ARHGEF1-204ENST00000378152 IPO8O15397 1037 aaKnown RBP20.05■□□□□ 0.8
ARHGEF1-204ENST00000378152 HSP90AB1P08238 724 aaKnown RBP20.05■□□□□ 0.8
ARHGEF1-204ENST00000378152 NAP1L5Q96NT1 182 aaPredicted RBP20.05■□□□□ 0.8
ARHGEF1-204ENST00000378152 MRE11P49959 708 aa20.04■□□□□ 0.8
ARHGEF1-204ENST00000378152 CHD1LQ86WJ1 897 aa20.04■□□□□ 0.8
ARHGEF1-204ENST00000378152 C1orf115Q9H7X2 142 aa20.04■□□□□ 0.8
ARHGEF1-204ENST00000378152 TNPO1Q92973 898 aaKnown RBP20.04■□□□□ 0.8
ARHGEF1-204ENST00000378152 GRPEL1Q9HAV7 217 aa20.04■□□□□ 0.8
ARHGEF1-204ENST00000378152 KIF16BQ96L93 1317 aa20.04■□□□□ 0.8
ARHGEF1-204ENST00000378152 RBM25P49756 843 aaKnown RBP20.04■□□□□ 0.8
ARHGEF1-204ENST00000378152 MINK1Q8N4C8 1332 aaPredicted RBP20.03■□□□□ 0.8
ARHGEF1-204ENST00000378152 FYB1O15117 783 aa20.03■□□□□ 0.8
ARHGEF1-204ENST00000378152 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
ARHGEF1-204ENST00000378152 PNNQ9H307 717 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms