RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 MFAP1P55081 439 aaKnown RBP25.91■■□□□ 1.74
CLN5-201ENST00000377453 BECN1Q14457 450 aa25.91■■□□□ 1.74
CLN5-201ENST00000377453 ABCC11Q96J66 1382 aa25.91■■□□□ 1.74
CLN5-201ENST00000377453 TMEM57Q8N5G2 664 aa25.9■■□□□ 1.74
CLN5-201ENST00000377453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.9■■□□□ 1.74
CLN5-201ENST00000377453 ARXQ96QS3 562 aa25.9■■□□□ 1.74
CLN5-201ENST00000377453 UPF2Q9HAU5 1272 aaKnown RBP25.89■■□□□ 1.74
CLN5-201ENST00000377453 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.89■■□□□ 1.73
CLN5-201ENST00000377453 RIMBP3CA6NJZ7 1639 aa25.88■■□□□ 1.73
CLN5-201ENST00000377453 RIMBP3BA6NNM3 1639 aa25.88■■□□□ 1.73
CLN5-201ENST00000377453 RIMBP3Q9UFD9 1639 aa25.88■■□□□ 1.73
CLN5-201ENST00000377453 NSD2O96028 1365 aa25.88■■□□□ 1.73
CLN5-201ENST00000377453 ADGRB2O60241 1585 aa25.88■■□□□ 1.73
CLN5-201ENST00000377453 THUMPD2Q9BTF0 503 aaKnown RBP25.87■■□□□ 1.73
CLN5-201ENST00000377453 YEATS2Q9ULM3 1422 aa25.87■■□□□ 1.73
CLN5-201ENST00000377453 ANTXR1Q9H6X2 564 aa25.87■■□□□ 1.73
CLN5-201ENST00000377453 CABP1Q9NZU7 370 aa25.87■■□□□ 1.73
CLN5-201ENST00000377453 ATF7IPQ6VMQ6 1270 aa25.86■■□□□ 1.73
CLN5-201ENST00000377453 COL3A1P02461 1466 aaPredicted RBP25.85■■□□□ 1.73
CLN5-201ENST00000377453 PIK3C2BO00750 1634 aa25.85■■□□□ 1.73
CLN5-201ENST00000377453 DIAPH1O60610 1272 aaKnown RBP25.84■■□□□ 1.73
CLN5-201ENST00000377453 CDK19Q9BWU1 502 aa25.84■■□□□ 1.73
CLN5-201ENST00000377453 CD163L1Q9NR16 1453 aa25.83■■□□□ 1.73
CLN5-201ENST00000377453 PUS7Q96PZ0 661 aaKnown RBP25.83■■□□□ 1.73
CLN5-201ENST00000377453 HMOX1P09601 288 aa25.83■■□□□ 1.72
CLN5-201ENST00000377453 TERF2IPQ9NYB0 399 aa25.82■■□□□ 1.72
CLN5-201ENST00000377453 AAMPQ13685 434 aa25.82■■□□□ 1.72
CLN5-201ENST00000377453 WAPLQ7Z5K2 1190 aa25.82■■□□□ 1.72
CLN5-201ENST00000377453 MYO5BQ9ULV0 1848 aa25.81■■□□□ 1.72
CLN5-201ENST00000377453 PTPRMP28827 1452 aa25.81■■□□□ 1.72
CLN5-201ENST00000377453 DIP2CQ9Y2E4 1556 aa25.8■■□□□ 1.72
CLN5-201ENST00000377453 ELL2O00472 640 aaPredicted RBP25.8■■□□□ 1.72
CLN5-201ENST00000377453 PRKAR2BP31323 418 aa25.8■■□□□ 1.72
CLN5-201ENST00000377453 C22orf23Q9BZE7 217 aa25.8■■□□□ 1.72
CLN5-201ENST00000377453 C1orf115Q9H7X2 142 aa25.8■■□□□ 1.72
CLN5-201ENST00000377453 LNPKQ9C0E8 428 aa25.79■■□□□ 1.72
CLN5-201ENST00000377453 DDX19BQ9UMR2 479 aa25.79■■□□□ 1.72
CLN5-201ENST00000377453 PHACTR3Q96KR7 559 aa25.78■■□□□ 1.72
CLN5-201ENST00000377453 TSPOAP1O95153 1857 aa25.78■■□□□ 1.72
CLN5-201ENST00000377453 YTHDC2Q9H6S0 1430 aaKnown RBP25.78■■□□□ 1.72
CLN5-201ENST00000377453 ZRANB1Q9UGI0 708 aa25.77■■□□□ 1.72
CLN5-201ENST00000377453 ZBTB40Q9NUA8 1239 aa25.76■■□□□ 1.71
CLN5-201ENST00000377453 CFAP74Q9C0B2 1584 aa25.76■■□□□ 1.71
CLN5-201ENST00000377453 HDAC1Q13547 482 aaPredicted RBP25.76■■□□□ 1.71
CLN5-201ENST00000377453 HDGFL2Q7Z4V5 671 aaPredicted RBP25.76■■□□□ 1.71
CLN5-201ENST00000377453 SLC52A1Q9NWF4 448 aa25.76■■□□□ 1.71
CLN5-201ENST00000377453 STAG3Q9UJ98 1225 aa25.76■■□□□ 1.71
CLN5-201ENST00000377453 NEO1Q92859 1461 aa25.75■■□□□ 1.71
CLN5-201ENST00000377453 ATAD2Q6PL18 1390 aa25.75■■□□□ 1.71
CLN5-201ENST00000377453 GZF1Q9H116 711 aaPredicted RBP25.75■■□□□ 1.71
CLN5-201ENST00000377453 TSPYL6Q8N831 410 aa25.74■■□□□ 1.71
CLN5-201ENST00000377453 CT47B1P0C2W7 299 aaPredicted RBP25.73■■□□□ 1.71
CLN5-201ENST00000377453 EMILIN1Q9Y6C2 1016 aa25.73■■□□□ 1.71
CLN5-201ENST00000377453 POLKQ9UBT6 870 aa25.73■■□□□ 1.71
CLN5-201ENST00000377453 SMC5Q8IY18 1101 aa25.72■■□□□ 1.71
CLN5-201ENST00000377453 NCKAP5LQ9HCH0 1330 aa25.72■■□□□ 1.71
CLN5-201ENST00000377453 RSPH6AQ9H0K4 717 aa25.71■■□□□ 1.71
CLN5-201ENST00000377453 NCBP3Q53F19 620 aaKnown RBP25.71■■□□□ 1.71
CLN5-201ENST00000377453 LRRC7Q96NW7 1537 aa25.69■■□□□ 1.7
CLN5-201ENST00000377453 ARHGAP31Q2M1Z3 1444 aa25.68■■□□□ 1.7
CLN5-201ENST00000377453 IL16Q14005 1332 aa25.68■■□□□ 1.7
CLN5-201ENST00000377453 TMEM131LA2VDJ0 1609 aa25.67■■□□□ 1.7
CLN5-201ENST00000377453 NME9Q86XW9 330 aa25.67■■□□□ 1.7
CLN5-201ENST00000377453 ZMYM3Q14202 1370 aa25.67■■□□□ 1.7
CLN5-201ENST00000377453 PNPLA6Q8IY17 1366 aa25.67■■□□□ 1.7
CLN5-201ENST00000377453 ZFYVE9O95405 1425 aa25.67■■□□□ 1.7
CLN5-201ENST00000377453 MLECQ14165 292 aa25.67■■□□□ 1.7
CLN5-201ENST00000377453 KIF16BQ96L93 1317 aa25.66■■□□□ 1.7
CLN5-201ENST00000377453 RICTORQ6R327 1708 aa25.66■■□□□ 1.7
CLN5-201ENST00000377453 NUCB1Q02818 461 aa25.65■■□□□ 1.7
CLN5-201ENST00000377453 FAM83GA6ND36 823 aa25.65■■□□□ 1.7
CLN5-201ENST00000377453 IPO8O15397 1037 aaKnown RBP25.65■■□□□ 1.7
CLN5-201ENST00000377453 FCHSD2O94868 740 aa25.65■■□□□ 1.7
CLN5-201ENST00000377453 ANKRD45Q5TZF3 282 aa25.65■■□□□ 1.7
CLN5-201ENST00000377453 ARHGEF40Q8TER5 1519 aa25.64■■□□□ 1.7
CLN5-201ENST00000377453 DCTN1Q14203 1278 aa25.64■■□□□ 1.69
CLN5-201ENST00000377453 RRS1Q15050 365 aaKnown RBP25.64■■□□□ 1.69
CLN5-201ENST00000377453 CHD1LQ86WJ1 897 aa25.64■■□□□ 1.69
CLN5-201ENST00000377453 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
CLN5-201ENST00000377453 MCM4P33991 863 aa25.63■■□□□ 1.69
CLN5-201ENST00000377453 FOXD4L1Q9NU39 408 aa25.63■■□□□ 1.69
CLN5-201ENST00000377453 PREX1Q8TCU6 1659 aa25.63■■□□□ 1.69
CLN5-201ENST00000377453 VAMP4O75379 141 aa25.62■■□□□ 1.69
CLN5-201ENST00000377453 DIP2BQ9P265 1576 aa25.61■■□□□ 1.69
CLN5-201ENST00000377453 NFE2L2Q16236 605 aa25.61■■□□□ 1.69
CLN5-201ENST00000377453 MBIPQ9NS73 344 aa25.61■■□□□ 1.69
CLN5-201ENST00000377453 FAM135BQ49AJ0 1406 aa25.61■■□□□ 1.69
CLN5-201ENST00000377453 MRPL50Q8N5N7 158 aaKnown RBP25.6■■□□□ 1.69
CLN5-201ENST00000377453 PPIP5K1Q6PFW1 1433 aa25.6■■□□□ 1.69
CLN5-201ENST00000377453 ZBTB7BO15156 539 aaPredicted RBP25.59■■□□□ 1.69
CLN5-201ENST00000377453 ALDH1L2Q3SY69 923 aa25.59■■□□□ 1.69
CLN5-201ENST00000377453 HSCBQ8IWL3 235 aa25.59■■□□□ 1.69
CLN5-201ENST00000377453 SIRT2Q8IXJ6 389 aa25.59■■□□□ 1.69
CLN5-201ENST00000377453 MED14O60244 1454 aa25.59■■□□□ 1.69
CLN5-201ENST00000377453 C8orf58Q8NAV2 365 aa25.58■■□□□ 1.69
CLN5-201ENST00000377453 ANKRD26Q9UPS8 1709 aa25.58■■□□□ 1.69
CLN5-201ENST00000377453 PANK2Q9BZ23 570 aa25.57■■□□□ 1.68
CLN5-201ENST00000377453 TXNDC2Q86VQ3 553 aa25.57■■□□□ 1.68
CLN5-201ENST00000377453 CHMP5Q9NZZ3 219 aa25.57■■□□□ 1.68
CLN5-201ENST00000377453 CD2BP2O95400 341 aaKnown RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms