RNA–Protein interactions for RNA: ENST00000376199.6

FOXP3-202, Transcript of forkhead box P3, humanhuman

TSL 2 BASIC

Gene FOXP3, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3-202ENST00000376199 STAG3Q9UJ98 1225 aa20.86■□□□□ 0.93
FOXP3-202ENST00000376199 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
FOXP3-202ENST00000376199 CDK19Q9BWU1 502 aa20.85■□□□□ 0.93
FOXP3-202ENST00000376199 NLRP1Q9C000 1473 aa20.85■□□□□ 0.93
FOXP3-202ENST00000376199 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
FOXP3-202ENST00000376199 PNNQ9H307 717 aaKnown RBP20.85■□□□□ 0.93
FOXP3-202ENST00000376199 TNNQ9UQP3 1299 aa20.85■□□□□ 0.93
FOXP3-202ENST00000376199 PCDHB15Q9Y5E8 787 aa20.85■□□□□ 0.93
FOXP3-202ENST00000376199 VIRMAQ69YN4 1812 aaKnown RBP20.85■□□□□ 0.93
FOXP3-202ENST00000376199 RWDD1Q9H446 243 aaPredicted RBP20.84■□□□□ 0.93
FOXP3-202ENST00000376199 IL16Q14005 1332 aa20.84■□□□□ 0.93
FOXP3-202ENST00000376199 ARHGEF40Q8TER5 1519 aa20.84■□□□□ 0.93
FOXP3-202ENST00000376199 ZMYM3Q14202 1370 aa20.83■□□□□ 0.93
FOXP3-202ENST00000376199 SLC4A3P48751 1232 aa20.83■□□□□ 0.93
FOXP3-202ENST00000376199 MVPQ14764 893 aaKnown RBP20.83■□□□□ 0.92
FOXP3-202ENST00000376199 TRIM35Q9UPQ4 493 aa20.83■□□□□ 0.92
FOXP3-202ENST00000376199 DIAPH1O60610 1272 aaKnown RBP20.82■□□□□ 0.92
FOXP3-202ENST00000376199 DZIP1LQ8IYY4 767 aaKnown RBP20.81■□□□□ 0.92
FOXP3-202ENST00000376199 PNPLA6Q8IY17 1366 aa20.81■□□□□ 0.92
FOXP3-202ENST00000376199 TSR2Q969E8 191 aaKnown RBP20.81■□□□□ 0.92
FOXP3-202ENST00000376199 REREQ9P2R6 1566 aa20.81■□□□□ 0.92
FOXP3-202ENST00000376199 EXOSC9Q06265 439 aaKnown RBP20.8■□□□□ 0.92
FOXP3-202ENST00000376199 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
FOXP3-202ENST00000376199 CABP1Q9NZU7 370 aa20.8■□□□□ 0.92
FOXP3-202ENST00000376199 AGLP35573 1532 aa20.8■□□□□ 0.92
FOXP3-202ENST00000376199 DLC1Q96QB1 1528 aa20.8■□□□□ 0.92
FOXP3-202ENST00000376199 FAM69CQ0P6D2 419 aa20.79■□□□□ 0.92
FOXP3-202ENST00000376199 SMC4Q9NTJ3 1288 aa20.79■□□□□ 0.92
FOXP3-202ENST00000376199 PDZRN3Q9UPQ7 1066 aa20.78■□□□□ 0.92
FOXP3-202ENST00000376199 RIPK4P57078 832 aa20.78■□□□□ 0.92
FOXP3-202ENST00000376199 KIF20BQ96Q89 1820 aa20.78■□□□□ 0.92
FOXP3-202ENST00000376199 USP19O94966 1318 aa20.77■□□□□ 0.92
FOXP3-202ENST00000376199 NFKBIBQ15653 356 aa20.76■□□□□ 0.91
FOXP3-202ENST00000376199 A2ML1A8K2U0 1454 aa20.76■□□□□ 0.91
FOXP3-202ENST00000376199 ATP7BP35670 1465 aa20.75■□□□□ 0.91
FOXP3-202ENST00000376199 FCHSD2O94868 740 aa20.75■□□□□ 0.91
FOXP3-202ENST00000376199 SSH1Q8WYL5 1049 aa20.75■□□□□ 0.91
FOXP3-202ENST00000376199 RIMS2Q9UQ26 1411 aa20.74■□□□□ 0.91
FOXP3-202ENST00000376199 CDC42BPGQ6DT37 1551 aa20.74■□□□□ 0.91
FOXP3-202ENST00000376199 SPATA31D1Q6ZQQ2 1576 aa20.74■□□□□ 0.91
FOXP3-202ENST00000376199 DIP2BQ9P265 1576 aa20.74■□□□□ 0.91
FOXP3-202ENST00000376199 TRIM27P14373 513 aa20.73■□□□□ 0.91
FOXP3-202ENST00000376199 ATF7IPQ6VMQ6 1270 aa20.73■□□□□ 0.91
FOXP3-202ENST00000376199 DDX19BQ9UMR2 479 aa20.73■□□□□ 0.91
FOXP3-202ENST00000376199 SEC24BO95487 1268 aa20.73■□□□□ 0.91
FOXP3-202ENST00000376199 WAPLQ7Z5K2 1190 aa20.71■□□□□ 0.91
FOXP3-202ENST00000376199 UPF2Q9HAU5 1272 aaKnown RBP20.71■□□□□ 0.91
FOXP3-202ENST00000376199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.71■□□□□ 0.91
FOXP3-202ENST00000376199 IPO8O15397 1037 aaKnown RBP20.7■□□□□ 0.9
FOXP3-202ENST00000376199 BECN1Q14457 450 aa20.7■□□□□ 0.9
FOXP3-202ENST00000376199 POLKQ9UBT6 870 aa20.7■□□□□ 0.9
FOXP3-202ENST00000376199 KIF16BQ96L93 1317 aa20.7■□□□□ 0.9
FOXP3-202ENST00000376199 HDAC1Q13547 482 aaPredicted RBP20.7■□□□□ 0.9
FOXP3-202ENST00000376199 NOB1Q9ULX3 412 aaKnown RBP20.7■□□□□ 0.9
FOXP3-202ENST00000376199 ITPRIPQ8IWB1 547 aa20.69■□□□□ 0.9
FOXP3-202ENST00000376199 SETD1AO15047 1707 aaKnown RBP20.69■□□□□ 0.9
FOXP3-202ENST00000376199 ALDH1L2Q3SY69 923 aa20.69■□□□□ 0.9
FOXP3-202ENST00000376199 RSPH6AQ9H0K4 717 aa20.69■□□□□ 0.9
FOXP3-202ENST00000376199 FAM135BQ49AJ0 1406 aa20.68■□□□□ 0.9
FOXP3-202ENST00000376199 LRRC7Q96NW7 1537 aa20.68■□□□□ 0.9
FOXP3-202ENST00000376199 PRKAR2BP31323 418 aa20.67■□□□□ 0.9
FOXP3-202ENST00000376199 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.67■□□□□ 0.9
FOXP3-202ENST00000376199 KIF13AQ9H1H9 1805 aa20.67■□□□□ 0.9
FOXP3-202ENST00000376199 ZNF428Q96B54 188 aa20.66■□□□□ 0.9
FOXP3-202ENST00000376199 EDC4Q6P2E9 1401 aaKnown RBP20.66■□□□□ 0.9
FOXP3-202ENST00000376199 TSPOAP1O95153 1857 aa20.66■□□□□ 0.9
FOXP3-202ENST00000376199 CPSF1Q10570 1443 aaKnown RBP20.65■□□□□ 0.9
FOXP3-202ENST00000376199 WASLO00401 505 aaPredicted RBP20.65■□□□□ 0.9
FOXP3-202ENST00000376199 CALD1Q05682 793 aaKnown RBP20.65■□□□□ 0.9
FOXP3-202ENST00000376199 TBC1D32Q96NH3 1257 aa20.65■□□□□ 0.9
FOXP3-202ENST00000376199 NFE2L2Q16236 605 aa20.64■□□□□ 0.89
FOXP3-202ENST00000376199 TMEM57Q8N5G2 664 aa20.64■□□□□ 0.89
FOXP3-202ENST00000376199 GSE1Q14687 1217 aa20.64■□□□□ 0.89
FOXP3-202ENST00000376199 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
FOXP3-202ENST00000376199 MLECQ14165 292 aa20.63■□□□□ 0.89
FOXP3-202ENST00000376199 PPIP5K1Q6PFW1 1433 aa20.63■□□□□ 0.89
FOXP3-202ENST00000376199 ZBTB40Q9NUA8 1239 aa20.62■□□□□ 0.89
FOXP3-202ENST00000376199 SIRT1Q96EB6 747 aa20.62■□□□□ 0.89
FOXP3-202ENST00000376199 FBLN1P23142 703 aa20.61■□□□□ 0.89
FOXP3-202ENST00000376199 SMC5Q8IY18 1101 aa20.61■□□□□ 0.89
FOXP3-202ENST00000376199 AATKQ6ZMQ8 1374 aa20.61■□□□□ 0.89
FOXP3-202ENST00000376199 NRXN3Q9Y4C0 1643 aa20.61■□□□□ 0.89
FOXP3-202ENST00000376199 HDGFP51858 240 aaKnown RBP20.61■□□□□ 0.89
FOXP3-202ENST00000376199 CDK12Q9NYV4 1490 aaPredicted RBP20.6■□□□□ 0.89
FOXP3-202ENST00000376199 MAP2P11137 1827 aaKnown RBP20.6■□□□□ 0.89
FOXP3-202ENST00000376199 IL13P35225 146 aa20.6■□□□□ 0.89
FOXP3-202ENST00000376199 METP08581 1390 aa20.6■□□□□ 0.89
FOXP3-202ENST00000376199 FRAT2O75474 233 aaPredicted RBP20.59■□□□□ 0.89
FOXP3-202ENST00000376199 HMOX1P09601 288 aa20.59■□□□□ 0.89
FOXP3-202ENST00000376199 NME9Q86XW9 330 aa20.59■□□□□ 0.89
FOXP3-202ENST00000376199 PHACTR3Q96KR7 559 aa20.59■□□□□ 0.89
FOXP3-202ENST00000376199 EMILIN1Q9Y6C2 1016 aa20.59■□□□□ 0.89
FOXP3-202ENST00000376199 NUDT16Q96DE0 195 aaKnown RBP20.58■□□□□ 0.89
FOXP3-202ENST00000376199 ESF1Q9H501 851 aaKnown RBP20.58■□□□□ 0.89
FOXP3-202ENST00000376199 GNAI1P63096 354 aa20.58■□□□□ 0.88
FOXP3-202ENST00000376199 CHMP4BQ9H444 224 aaKnown RBP20.58■□□□□ 0.88
FOXP3-202ENST00000376199 TXNDC2Q86VQ3 553 aa20.57■□□□□ 0.88
FOXP3-202ENST00000376199 COG3Q96JB2 828 aa20.57■□□□□ 0.88
FOXP3-202ENST00000376199 IFT57Q9NWB7 429 aa20.57■□□□□ 0.88
FOXP3-202ENST00000376199 CCDC61Q9Y6R9 512 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms