RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 EVC2Q86UK5 1308 aa9.56□□□□□ -0.88
GARNL3-202ENST00000373387 POGKQ9P215 609 aa9.56□□□□□ -0.88
GARNL3-202ENST00000373387 FAM135BQ49AJ0 1406 aa9.56□□□□□ -0.88
GARNL3-202ENST00000373387 AKAP12Q02952 1782 aa9.56□□□□□ -0.88
GARNL3-202ENST00000373387 MYH16Q9H6N6 1097 aa9.56□□□□□ -0.88
GARNL3-202ENST00000373387 PIK3R4Q99570 1358 aa9.56□□□□□ -0.88
GARNL3-202ENST00000373387 SMC5Q8IY18 1101 aa9.56□□□□□ -0.88
GARNL3-202ENST00000373387 NRXN3Q9Y4C0 1643 aa9.56□□□□□ -0.88
GARNL3-202ENST00000373387 BRPF1P55201 1214 aaPredicted RBP9.55□□□□□ -0.88
GARNL3-202ENST00000373387 RWDD1Q9H446 243 aaPredicted RBP9.55□□□□□ -0.88
GARNL3-202ENST00000373387 RTN4Q9NQC3 1192 aaKnown RBP9.55□□□□□ -0.88
GARNL3-202ENST00000373387 YEATS2Q9ULM3 1422 aa9.55□□□□□ -0.88
GARNL3-202ENST00000373387 FSD2A1L4K1 749 aa9.55□□□□□ -0.88
GARNL3-202ENST00000373387 FAM43AQ8N2R8 423 aa9.55□□□□□ -0.88
GARNL3-202ENST00000373387 TRIM27P14373 513 aa9.55□□□□□ -0.88
GARNL3-202ENST00000373387 BECN1Q14457 450 aa9.55□□□□□ -0.88
GARNL3-202ENST00000373387 NRKQ7Z2Y5 1582 aa9.54□□□□□ -0.88
GARNL3-202ENST00000373387 ZKSCAN2Q63HK3 967 aa9.54□□□□□ -0.88
GARNL3-202ENST00000373387 TUBGCP6Q96RT7 1819 aa9.54□□□□□ -0.88
GARNL3-202ENST00000373387 YTHDC2Q9H6S0 1430 aaKnown RBP9.54□□□□□ -0.88
GARNL3-202ENST00000373387 CFAP53Q96M91 514 aa9.54□□□□□ -0.88
GARNL3-202ENST00000373387 C3P01024 1663 aa9.54□□□□□ -0.88
GARNL3-202ENST00000373387 TMPOP42166 694 aaKnown RBP9.54□□□□□ -0.88
GARNL3-202ENST00000373387 DZIP1LQ8IYY4 767 aaKnown RBP9.54□□□□□ -0.88
GARNL3-202ENST00000373387 BCL2L13Q9BXK5 485 aa9.54□□□□□ -0.88
GARNL3-202ENST00000373387 PTCH1Q13635 1447 aa9.53□□□□□ -0.88
GARNL3-202ENST00000373387 ZBTB40Q9NUA8 1239 aa9.53□□□□□ -0.88
GARNL3-202ENST00000373387 CANXP27824 592 aaKnown RBP9.53□□□□□ -0.88
GARNL3-202ENST00000373387 TNNT2P45379 298 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-202ENST00000373387 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
GARNL3-202ENST00000373387 ATP7BP35670 1465 aa9.53□□□□□ -0.88
GARNL3-202ENST00000373387 SSH1Q8WYL5 1049 aa9.52□□□□□ -0.88
GARNL3-202ENST00000373387 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
GARNL3-202ENST00000373387 TSR2Q969E8 191 aaKnown RBP9.52□□□□□ -0.89
GARNL3-202ENST00000373387 FYB1O15117 783 aa9.52□□□□□ -0.89
GARNL3-202ENST00000373387 VGFO15240 615 aaPredicted RBP9.52□□□□□ -0.89
GARNL3-202ENST00000373387 RBM25P49756 843 aaKnown RBP9.52□□□□□ -0.89
GARNL3-202ENST00000373387 ATF7IPQ6VMQ6 1270 aa9.52□□□□□ -0.89
GARNL3-202ENST00000373387 EXOSC9Q06265 439 aaKnown RBP9.51□□□□□ -0.89
GARNL3-202ENST00000373387 RGPD1P0DJD0 1748 aa9.51□□□□□ -0.89
GARNL3-202ENST00000373387 CABP2Q9NPB3 220 aa9.51□□□□□ -0.89
GARNL3-202ENST00000373387 DDX19BQ9UMR2 479 aa9.51□□□□□ -0.89
GARNL3-202ENST00000373387 NALCNQ8IZF0 1738 aa9.5□□□□□ -0.89
GARNL3-202ENST00000373387 U2AF1L5P0DN76 240 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-202ENST00000373387 U2AF1Q01081 240 aaKnown RBP eCLIP9.5□□□□□ -0.89
GARNL3-202ENST00000373387 ALDH1L2Q3SY69 923 aa9.5□□□□□ -0.89
GARNL3-202ENST00000373387 SPATA31D1Q6ZQQ2 1576 aa9.5□□□□□ -0.89
GARNL3-202ENST00000373387 NUCB1Q02818 461 aa9.5□□□□□ -0.89
GARNL3-202ENST00000373387 SLKQ9H2G2 1235 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-202ENST00000373387 TOPAZ1Q8N9V7 1692 aa9.49□□□□□ -0.89
GARNL3-202ENST00000373387 ITSN1Q15811 1721 aa9.49□□□□□ -0.89
GARNL3-202ENST00000373387 MCM4P33991 863 aa9.49□□□□□ -0.89
GARNL3-202ENST00000373387 SNX21Q969T3 373 aa9.49□□□□□ -0.89
GARNL3-202ENST00000373387 KIF2CQ99661 725 aa9.49□□□□□ -0.89
GARNL3-202ENST00000373387 C22orf23Q9BZE7 217 aa9.49□□□□□ -0.89
GARNL3-202ENST00000373387 N4BP2Q86UW6 1770 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-202ENST00000373387 CDK12Q9NYV4 1490 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-202ENST00000373387 CPSF1Q10570 1443 aaKnown RBP9.49□□□□□ -0.89
GARNL3-202ENST00000373387 IDI1Q13907 227 aa9.49□□□□□ -0.89
GARNL3-202ENST00000373387 TMEM57Q8N5G2 664 aa9.49□□□□□ -0.89
GARNL3-202ENST00000373387 NOB1Q9ULX3 412 aaKnown RBP9.49□□□□□ -0.89
GARNL3-202ENST00000373387 RSPH6AQ9H0K4 717 aa9.48□□□□□ -0.89
GARNL3-202ENST00000373387 KIF16BQ96L93 1317 aa9.48□□□□□ -0.89
GARNL3-202ENST00000373387 GGT6Q6P531 493 aa9.47□□□□□ -0.89
GARNL3-202ENST00000373387 UPF2Q9HAU5 1272 aaKnown RBP9.47□□□□□ -0.89
GARNL3-202ENST00000373387 RRAGDQ9NQL2 400 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-202ENST00000373387 SMC4Q9NTJ3 1288 aa9.47□□□□□ -0.89
GARNL3-202ENST00000373387 SLC52A1Q9NWF4 448 aa9.47□□□□□ -0.89
GARNL3-202ENST00000373387 AGLP35573 1532 aa9.47□□□□□ -0.89
GARNL3-202ENST00000373387 ZNF853P0CG23 659 aa9.47□□□□□ -0.89
GARNL3-202ENST00000373387 ZNF428Q96B54 188 aa9.47□□□□□ -0.89
GARNL3-202ENST00000373387 CHGAP10645 457 aaKnown RBP9.46□□□□□ -0.89
GARNL3-202ENST00000373387 XRCC6P12956 609 aaKnown RBP eCLIP9.46□□□□□ -0.89
GARNL3-202ENST00000373387 L1TD1Q5T7N2 865 aaKnown RBP9.46□□□□□ -0.89
GARNL3-202ENST00000373387 GGNBP2Q9H3C7 697 aa9.46□□□□□ -0.89
GARNL3-202ENST00000373387 FTSJ3Q8IY81 847 aaKnown RBP9.46□□□□□ -0.9
GARNL3-202ENST00000373387 CHMP5Q9NZZ3 219 aa9.46□□□□□ -0.9
GARNL3-202ENST00000373387 ABCC4O15439 1325 aa9.46□□□□□ -0.9
GARNL3-202ENST00000373387 ZBTB7BO15156 539 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-202ENST00000373387 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-202ENST00000373387 FCHSD2O94868 740 aa9.45□□□□□ -0.9
GARNL3-202ENST00000373387 ARHGAP45Q92619 1136 aa9.45□□□□□ -0.9
GARNL3-202ENST00000373387 CPS1P31327 1500 aa9.45□□□□□ -0.9
GARNL3-202ENST00000373387 A2ML1A8K2U0 1454 aa9.45□□□□□ -0.9
GARNL3-202ENST00000373387 BMP2KLQ5H9B9 411 aa9.45□□□□□ -0.9
GARNL3-202ENST00000373387 RGS12O14924 1447 aa9.45□□□□□ -0.9
GARNL3-202ENST00000373387 AATKQ6ZMQ8 1374 aa9.45□□□□□ -0.9
GARNL3-202ENST00000373387 FMN2Q9NZ56 1722 aa9.44□□□□□ -0.9
GARNL3-202ENST00000373387 RIPK4P57078 832 aa9.44□□□□□ -0.9
GARNL3-202ENST00000373387 KIF24Q5T7B8 1368 aa9.44□□□□□ -0.9
GARNL3-202ENST00000373387 PEAK1Q9H792 1746 aa9.44□□□□□ -0.9
GARNL3-202ENST00000373387 ITPRIPQ8IWB1 547 aa9.44□□□□□ -0.9
GARNL3-202ENST00000373387 SIRT2Q8IXJ6 389 aa9.44□□□□□ -0.9
GARNL3-202ENST00000373387 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
GARNL3-202ENST00000373387 DIAPH1O60610 1272 aaKnown RBP9.44□□□□□ -0.9
GARNL3-202ENST00000373387 CLEC17AQ6ZS10 378 aa9.44□□□□□ -0.9
GARNL3-202ENST00000373387 VAMP4O75379 141 aa9.43□□□□□ -0.9
GARNL3-202ENST00000373387 NUTM2DQ5VT03 806 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-202ENST00000373387 CHD1LQ86WJ1 897 aa9.43□□□□□ -0.9
GARNL3-202ENST00000373387 TERF2IPQ9NYB0 399 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms