RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
TSPAN6-201ENST00000373020 RLBP1P12271 317 aa16.17■□□□□ 0.18
TSPAN6-201ENST00000373020 FRAT1Q92837 279 aaPredicted RBP16.16■□□□□ 0.18
TSPAN6-201ENST00000373020 USP35Q9P2H5 1018 aa16.16■□□□□ 0.18
TSPAN6-201ENST00000373020 TSPOAP1O95153 1857 aa16.16■□□□□ 0.18
TSPAN6-201ENST00000373020 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
TSPAN6-201ENST00000373020 IL16Q14005 1332 aa16.15■□□□□ 0.18
TSPAN6-201ENST00000373020 RIMS2Q9UQ26 1411 aa16.15■□□□□ 0.18
TSPAN6-201ENST00000373020 TMPOP42166 694 aaKnown RBP16.15■□□□□ 0.18
TSPAN6-201ENST00000373020 PMFBP1Q8TBY8 1022 aa16.15■□□□□ 0.18
TSPAN6-201ENST00000373020 FAM69CQ0P6D2 419 aa16.14■□□□□ 0.17
TSPAN6-201ENST00000373020 HDGFL2Q7Z4V5 671 aaPredicted RBP16.14■□□□□ 0.17
TSPAN6-201ENST00000373020 CDK19Q9BWU1 502 aa16.14■□□□□ 0.17
TSPAN6-201ENST00000373020 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
TSPAN6-201ENST00000373020 TNNQ9UQP3 1299 aa16.14■□□□□ 0.17
TSPAN6-201ENST00000373020 LRRC7Q96NW7 1537 aa16.14■□□□□ 0.17
TSPAN6-201ENST00000373020 KNDC1Q76NI1 1749 aa16.14■□□□□ 0.17
TSPAN6-201ENST00000373020 CYB5RLQ6IPT4 315 aa16.14■□□□□ 0.17
TSPAN6-201ENST00000373020 LAS1LQ9Y4W2 734 aaKnown RBP16.13■□□□□ 0.17
TSPAN6-201ENST00000373020 PCDHB15Q9Y5E8 787 aa16.13■□□□□ 0.17
TSPAN6-201ENST00000373020 BCL2L13Q9BXK5 485 aa16.11■□□□□ 0.17
TSPAN6-201ENST00000373020 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
TSPAN6-201ENST00000373020 MVPQ14764 893 aaKnown RBP16.11■□□□□ 0.17
TSPAN6-201ENST00000373020 USP19O94966 1318 aa16.11■□□□□ 0.17
TSPAN6-201ENST00000373020 FAM135BQ49AJ0 1406 aa16.1■□□□□ 0.17
TSPAN6-201ENST00000373020 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
TSPAN6-201ENST00000373020 CABP1Q9NZU7 370 aa16.1■□□□□ 0.17
TSPAN6-201ENST00000373020 DIAPH1O60610 1272 aaKnown RBP16.1■□□□□ 0.17
TSPAN6-201ENST00000373020 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
TSPAN6-201ENST00000373020 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
TSPAN6-201ENST00000373020 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
TSPAN6-201ENST00000373020 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
TSPAN6-201ENST00000373020 MON2Q7Z3U7 1717 aa16.09■□□□□ 0.17
TSPAN6-201ENST00000373020 NEFMP07197 916 aa16.09■□□□□ 0.17
TSPAN6-201ENST00000373020 EXOSC9Q06265 439 aaKnown RBP16.08■□□□□ 0.16
TSPAN6-201ENST00000373020 TECPR2O15040 1411 aa16.08■□□□□ 0.16
TSPAN6-201ENST00000373020 EDC4Q6P2E9 1401 aaKnown RBP16.08■□□□□ 0.16
TSPAN6-201ENST00000373020 CPS1P31327 1500 aa16.07■□□□□ 0.16
TSPAN6-201ENST00000373020 PPIP5K1Q6PFW1 1433 aa16.07■□□□□ 0.16
TSPAN6-201ENST00000373020 PNNQ9H307 717 aaKnown RBP16.07■□□□□ 0.16
TSPAN6-201ENST00000373020 DZIP1LQ8IYY4 767 aaKnown RBP16.07■□□□□ 0.16
TSPAN6-201ENST00000373020 MAP2P11137 1827 aaKnown RBP16.07■□□□□ 0.16
TSPAN6-201ENST00000373020 CDK12Q9NYV4 1490 aaPredicted RBP16.06■□□□□ 0.16
TSPAN6-201ENST00000373020 FCHSD2O94868 740 aa16.06■□□□□ 0.16
TSPAN6-201ENST00000373020 RWDD1Q9H446 243 aaPredicted RBP16.06■□□□□ 0.16
TSPAN6-201ENST00000373020 WAPLQ7Z5K2 1190 aa16.05■□□□□ 0.16
TSPAN6-201ENST00000373020 SSH1Q8WYL5 1049 aa16.05■□□□□ 0.16
TSPAN6-201ENST00000373020 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
TSPAN6-201ENST00000373020 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
TSPAN6-201ENST00000373020 PDZRN3Q9UPQ7 1066 aa16.05■□□□□ 0.16
TSPAN6-201ENST00000373020 AKAP12Q02952 1782 aa16.05■□□□□ 0.16
TSPAN6-201ENST00000373020 TRIM27P14373 513 aa16.04■□□□□ 0.16
TSPAN6-201ENST00000373020 RIPK4P57078 832 aa16.04■□□□□ 0.16
TSPAN6-201ENST00000373020 POLKQ9UBT6 870 aa16.04■□□□□ 0.16
TSPAN6-201ENST00000373020 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
TSPAN6-201ENST00000373020 C3P01024 1663 aa16.04■□□□□ 0.16
TSPAN6-201ENST00000373020 KIF13AQ9H1H9 1805 aa16.04■□□□□ 0.16
TSPAN6-201ENST00000373020 SLC4A3P48751 1232 aa16.03■□□□□ 0.16
TSPAN6-201ENST00000373020 METP08581 1390 aa16.03■□□□□ 0.16
TSPAN6-201ENST00000373020 AATKQ6ZMQ8 1374 aa16.03■□□□□ 0.16
TSPAN6-201ENST00000373020 ATF7IPQ6VMQ6 1270 aa16.03■□□□□ 0.16
TSPAN6-201ENST00000373020 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.02■□□□□ 0.16
TSPAN6-201ENST00000373020 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.16
TSPAN6-201ENST00000373020 ITSN1Q15811 1721 aa16.02■□□□□ 0.15
TSPAN6-201ENST00000373020 KIF16BQ96L93 1317 aa16.02■□□□□ 0.15
TSPAN6-201ENST00000373020 WASLO00401 505 aaPredicted RBP16.02■□□□□ 0.15
TSPAN6-201ENST00000373020 SEC24BO95487 1268 aa16.02■□□□□ 0.15
TSPAN6-201ENST00000373020 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.15
TSPAN6-201ENST00000373020 SIRT1Q96EB6 747 aa16.02■□□□□ 0.15
TSPAN6-201ENST00000373020 DDX19BQ9UMR2 479 aa16.02■□□□□ 0.15
TSPAN6-201ENST00000373020 ALDH1L2Q3SY69 923 aa16.01■□□□□ 0.15
TSPAN6-201ENST00000373020 BRPF1P55201 1214 aaPredicted RBP16■□□□□ 0.15
TSPAN6-201ENST00000373020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16■□□□□ 0.15
TSPAN6-201ENST00000373020 NRKQ7Z2Y5 1582 aa16■□□□□ 0.15
TSPAN6-201ENST00000373020 UBR1Q8IWV7 1749 aa16■□□□□ 0.15
TSPAN6-201ENST00000373020 PRKAR2BP31323 418 aa16■□□□□ 0.15
TSPAN6-201ENST00000373020 NFKBIBQ15653 356 aa16■□□□□ 0.15
TSPAN6-201ENST00000373020 ZNF428Q96B54 188 aa15.99■□□□□ 0.15
TSPAN6-201ENST00000373020 NFE2L2Q16236 605 aa15.98■□□□□ 0.15
TSPAN6-201ENST00000373020 NOB1Q9ULX3 412 aaKnown RBP15.98■□□□□ 0.15
TSPAN6-201ENST00000373020 TOPAZ1Q8N9V7 1692 aa15.98■□□□□ 0.15
TSPAN6-201ENST00000373020 IL13P35225 146 aa15.98■□□□□ 0.15
TSPAN6-201ENST00000373020 DLG5Q8TDM6 1919 aa15.97■□□□□ 0.15
TSPAN6-201ENST00000373020 PTCH1Q13635 1447 aa15.97■□□□□ 0.15
TSPAN6-201ENST00000373020 SMC5Q8IY18 1101 aa15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 TBC1D32Q96NH3 1257 aa15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 ZBTB40Q9NUA8 1239 aa15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 PIK3R4Q99570 1358 aa15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 FBLN1P23142 703 aa15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 MLECQ14165 292 aa15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 NME9Q86XW9 330 aa15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 TMEM57Q8N5G2 664 aa15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 EMILIN1Q9Y6C2 1016 aa15.96■□□□□ 0.15
TSPAN6-201ENST00000373020 TNRQ92752 1358 aa15.96■□□□□ 0.14
TSPAN6-201ENST00000373020 NUDT16Q96DE0 195 aaKnown RBP15.95■□□□□ 0.14
TSPAN6-201ENST00000373020 PHACTR3Q96KR7 559 aa15.95■□□□□ 0.14
TSPAN6-201ENST00000373020 CALD1Q05682 793 aaKnown RBP15.94■□□□□ 0.14
TSPAN6-201ENST00000373020 TMEM2Q9UHN6 1383 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms