RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 TRAK2O60296 914 aa22.8■■□□□ 1.24
HNF4A-203ENST00000372920 TMEM57Q8N5G2 664 aa22.8■■□□□ 1.24
HNF4A-203ENST00000372920 HSCBQ8IWL3 235 aa22.79■■□□□ 1.24
HNF4A-203ENST00000372920 ZBTB40Q9NUA8 1239 aa22.78■■□□□ 1.24
HNF4A-203ENST00000372920 CFAP65Q6ZU64 1925 aaKnown RBP22.78■■□□□ 1.24
HNF4A-203ENST00000372920 PANK2Q9BZ23 570 aa22.77■■□□□ 1.24
HNF4A-203ENST00000372920 GGNBP2Q9H3C7 697 aa22.77■■□□□ 1.24
HNF4A-203ENST00000372920 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
HNF4A-203ENST00000372920 A0A1W2PP64 1363 aa22.77■■□□□ 1.24
HNF4A-203ENST00000372920 ZNF692Q9BU19 519 aaPredicted RBP22.77■■□□□ 1.23
HNF4A-203ENST00000372920 ABCC11Q96J66 1382 aa22.76■■□□□ 1.23
HNF4A-203ENST00000372920 IL16Q14005 1332 aa22.76■■□□□ 1.23
HNF4A-203ENST00000372920 COL3A1P02461 1466 aaPredicted RBP22.76■■□□□ 1.23
HNF4A-203ENST00000372920 ARHGEF28Q8N1W1 1705 aaKnown RBP22.75■■□□□ 1.23
HNF4A-203ENST00000372920 ASXL2Q76L83 1435 aa22.74■■□□□ 1.23
HNF4A-203ENST00000372920 RIPK4P57078 832 aa22.74■■□□□ 1.23
HNF4A-203ENST00000372920 NUCB1Q02818 461 aa22.74■■□□□ 1.23
HNF4A-203ENST00000372920 VGFO15240 615 aaPredicted RBP22.73■■□□□ 1.23
HNF4A-203ENST00000372920 RBM25P49756 843 aaKnown RBP22.72■■□□□ 1.23
HNF4A-203ENST00000372920 FRMPD1Q5SYB0 1578 aa22.72■■□□□ 1.23
HNF4A-203ENST00000372920 KIF16BQ96L93 1317 aa22.72■■□□□ 1.23
HNF4A-203ENST00000372920 NCOA3Q9Y6Q9 1424 aa22.72■■□□□ 1.23
HNF4A-203ENST00000372920 IPO8O15397 1037 aaKnown RBP22.72■■□□□ 1.23
HNF4A-203ENST00000372920 DDIT3P35638 169 aa22.72■■□□□ 1.23
HNF4A-203ENST00000372920 DDX11L8A8MPP1 907 aa22.71■■□□□ 1.23
HNF4A-203ENST00000372920 SRPK2P78362 688 aaKnown RBP22.71■■□□□ 1.23
HNF4A-203ENST00000372920 LNPKQ9C0E8 428 aa22.71■■□□□ 1.23
HNF4A-203ENST00000372920 HECW2Q9P2P5 1572 aa22.69■■□□□ 1.22
HNF4A-203ENST00000372920 MRE11P49959 708 aa22.69■■□□□ 1.22
HNF4A-203ENST00000372920 SNX21Q969T3 373 aa22.69■■□□□ 1.22
HNF4A-203ENST00000372920 ABCC3O15438 1527 aa22.69■■□□□ 1.22
HNF4A-203ENST00000372920 FYB1O15117 783 aa22.69■■□□□ 1.22
HNF4A-203ENST00000372920 CAMSAP1Q5T5Y3 1602 aa22.69■■□□□ 1.22
HNF4A-203ENST00000372920 CHD1LQ86WJ1 897 aa22.69■■□□□ 1.22
HNF4A-203ENST00000372920 NEXMIFQ5QGS0 1516 aa22.68■■□□□ 1.22
HNF4A-203ENST00000372920 STK26Q9P289 416 aa22.68■■□□□ 1.22
HNF4A-203ENST00000372920 UBE2Q2Q8WVN8 375 aa22.67■■□□□ 1.22
HNF4A-203ENST00000372920 ALDH1L2Q3SY69 923 aa22.67■■□□□ 1.22
HNF4A-203ENST00000372920 DIAPH1O60610 1272 aaKnown RBP22.66■■□□□ 1.22
HNF4A-203ENST00000372920 SENP3Q9H4L4 574 aaPredicted RBP22.65■■□□□ 1.22
HNF4A-203ENST00000372920 POGZQ7Z3K3 1410 aa22.65■■□□□ 1.22
HNF4A-203ENST00000372920 GRPEL1Q9HAV7 217 aa22.65■■□□□ 1.22
HNF4A-203ENST00000372920 TNPO1Q92973 898 aaKnown RBP22.64■■□□□ 1.22
HNF4A-203ENST00000372920 TERF2IPQ9NYB0 399 aa22.64■■□□□ 1.22
HNF4A-203ENST00000372920 MLH3Q9UHC1 1453 aa22.64■■□□□ 1.22
HNF4A-203ENST00000372920 BMP2KLQ5H9B9 411 aa22.64■■□□□ 1.21
HNF4A-203ENST00000372920 CLCN1P35523 988 aa22.64■■□□□ 1.21
HNF4A-203ENST00000372920 HSP90AB1P08238 724 aaKnown RBP22.63■■□□□ 1.21
HNF4A-203ENST00000372920 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
HNF4A-203ENST00000372920 SIGLEC1Q9BZZ2 1709 aa22.63■■□□□ 1.21
HNF4A-203ENST00000372920 PIK3C2BO00750 1634 aa22.63■■□□□ 1.21
HNF4A-203ENST00000372920 MED14O60244 1454 aa22.62■■□□□ 1.21
HNF4A-203ENST00000372920 KIF2CQ99661 725 aa22.62■■□□□ 1.21
HNF4A-203ENST00000372920 CIZ1Q9ULV3 898 aaPredicted RBP22.62■■□□□ 1.21
HNF4A-203ENST00000372920 CD163L1Q9NR16 1453 aa22.62■■□□□ 1.21
HNF4A-203ENST00000372920 ATAD2Q6PL18 1390 aa22.61■■□□□ 1.21
HNF4A-203ENST00000372920 PNPLA6Q8IY17 1366 aa22.61■■□□□ 1.21
HNF4A-203ENST00000372920 MINK1Q8N4C8 1332 aaPredicted RBP22.61■■□□□ 1.21
HNF4A-203ENST00000372920 ANKRD45Q5TZF3 282 aa22.6■■□□□ 1.21
HNF4A-203ENST00000372920 ISY1Q9ULR0 285 aaKnown RBP22.6■■□□□ 1.21
HNF4A-203ENST00000372920 PPIP5K1Q6PFW1 1433 aa22.6■■□□□ 1.21
HNF4A-203ENST00000372920 ZBTB7BO15156 539 aaPredicted RBP22.59■■□□□ 1.21
HNF4A-203ENST00000372920 RAB3GAP1Q15042 981 aa22.59■■□□□ 1.21
HNF4A-203ENST00000372920 IDI1Q13907 227 aa22.59■■□□□ 1.21
HNF4A-203ENST00000372920 CFAP74Q9C0B2 1584 aa22.59■■□□□ 1.21
HNF4A-203ENST00000372920 FCHSD2O94868 740 aa22.59■■□□□ 1.21
HNF4A-203ENST00000372920 BRPF1P55201 1214 aaPredicted RBP22.59■■□□□ 1.21
HNF4A-203ENST00000372920 GBP4Q96PP9 640 aa22.58■■□□□ 1.21
HNF4A-203ENST00000372920 C1orf115Q9H7X2 142 aa22.58■■□□□ 1.21
HNF4A-203ENST00000372920 GCC1Q96CN9 775 aa22.58■■□□□ 1.2
HNF4A-203ENST00000372920 PRAM1Q96QH2 718 aa22.58■■□□□ 1.2
HNF4A-203ENST00000372920 ANKRD26Q9UPS8 1709 aa22.58■■□□□ 1.2
HNF4A-203ENST00000372920 CD2BP2O95400 341 aaKnown RBP22.57■■□□□ 1.2
HNF4A-203ENST00000372920 PRKAR2BP31323 418 aa22.57■■□□□ 1.2
HNF4A-203ENST00000372920 ZNF428Q96B54 188 aa22.57■■□□□ 1.2
HNF4A-203ENST00000372920 PTPRMP28827 1452 aa22.57■■□□□ 1.2
HNF4A-203ENST00000372920 NAP1L5Q96NT1 182 aaPredicted RBP22.57■■□□□ 1.2
HNF4A-203ENST00000372920 LRRC7Q96NW7 1537 aa22.56■■□□□ 1.2
HNF4A-203ENST00000372920 ZFYVE9O95405 1425 aa22.56■■□□□ 1.2
HNF4A-203ENST00000372920 TBC1D9Q6ZT07 1266 aa22.56■■□□□ 1.2
HNF4A-203ENST00000372920 FOXD4L1Q9NU39 408 aa22.56■■□□□ 1.2
HNF4A-203ENST00000372920 HDGFL2Q7Z4V5 671 aaPredicted RBP22.55■■□□□ 1.2
HNF4A-203ENST00000372920 GAS2L3Q86XJ1 694 aa22.55■■□□□ 1.2
HNF4A-203ENST00000372920 MRPL50Q8N5N7 158 aaKnown RBP22.55■■□□□ 1.2
HNF4A-203ENST00000372920 VAMP4O75379 141 aa22.54■■□□□ 1.2
HNF4A-203ENST00000372920 HSP90AA1P07900 732 aaKnown RBP22.54■■□□□ 1.2
HNF4A-203ENST00000372920 FAM135BQ49AJ0 1406 aa22.54■■□□□ 1.2
HNF4A-203ENST00000372920 THUMPD2Q9BTF0 503 aaKnown RBP22.53■■□□□ 1.2
HNF4A-203ENST00000372920 K7ELQ4 463 aaPredicted RBP22.53■■□□□ 1.2
HNF4A-203ENST00000372920 ARHGAP45Q92619 1136 aa22.53■■□□□ 1.2
HNF4A-203ENST00000372920 RBM42Q9BTD8 480 aaKnown RBP22.53■■□□□ 1.2
HNF4A-203ENST00000372920 CHMP4BQ9H444 224 aaKnown RBP22.53■■□□□ 1.2
HNF4A-203ENST00000372920 PIK3R4Q99570 1358 aa22.53■■□□□ 1.2
HNF4A-203ENST00000372920 SKOR2Q2VWA4 1001 aaPredicted RBP22.52■■□□□ 1.2
HNF4A-203ENST00000372920 SIRT2Q8IXJ6 389 aa22.52■■□□□ 1.2
HNF4A-203ENST00000372920 TSPYL6Q8N831 410 aa22.52■■□□□ 1.2
HNF4A-203ENST00000372920 CABP1Q9NZU7 370 aa22.52■■□□□ 1.2
HNF4A-203ENST00000372920 CDC42BPGQ6DT37 1551 aa22.52■■□□□ 1.2
HNF4A-203ENST00000372920 PTCH1Q13635 1447 aa22.52■■□□□ 1.2
HNF4A-203ENST00000372920 FBLN1P23142 703 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms