RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 IDI1Q13907 227 aa16.21■□□□□ 0.19
CHD1L-202ENST00000369258 CABP1Q9NZU7 370 aa16.21■□□□□ 0.19
CHD1L-202ENST00000369258 EVC2Q86UK5 1308 aa16.21■□□□□ 0.19
CHD1L-202ENST00000369258 HSP90AA1P07900 732 aaKnown RBP16.2■□□□□ 0.18
CHD1L-202ENST00000369258 PRKAR2BP31323 418 aa16.2■□□□□ 0.18
CHD1L-202ENST00000369258 HSCBQ8IWL3 235 aa16.2■□□□□ 0.18
CHD1L-202ENST00000369258 KRT24Q2M2I5 525 aa16.2■□□□□ 0.18
CHD1L-202ENST00000369258 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
CHD1L-202ENST00000369258 SHROOM2Q13796 1616 aa16.2■□□□□ 0.18
CHD1L-202ENST00000369258 WAPLQ7Z5K2 1190 aa16.19■□□□□ 0.18
CHD1L-202ENST00000369258 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
CHD1L-202ENST00000369258 SOX12O15370 315 aa16.19■□□□□ 0.18
CHD1L-202ENST00000369258 C16orf71Q8IYS4 520 aaPredicted RBP16.19■□□□□ 0.18
CHD1L-202ENST00000369258 TNPO1Q92973 898 aaKnown RBP16.19■□□□□ 0.18
CHD1L-202ENST00000369258 HSP90AB1P08238 724 aaKnown RBP16.18■□□□□ 0.18
CHD1L-202ENST00000369258 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
CHD1L-202ENST00000369258 DDX19BQ9UMR2 479 aa16.18■□□□□ 0.18
CHD1L-202ENST00000369258 AK9Q5TCS8 1911 aa16.18■□□□□ 0.18
CHD1L-202ENST00000369258 ERBB4Q15303 1308 aa16.18■□□□□ 0.18
CHD1L-202ENST00000369258 PPRC1Q5VV67 1664 aaKnown RBP16.18■□□□□ 0.18
CHD1L-202ENST00000369258 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
CHD1L-202ENST00000369258 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
CHD1L-202ENST00000369258 EMILIN1Q9Y6C2 1016 aa16.17■□□□□ 0.18
CHD1L-202ENST00000369258 KIF1BO60333 1816 aa16.17■□□□□ 0.18
CHD1L-202ENST00000369258 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
CHD1L-202ENST00000369258 FOXD4L5Q5VV16 416 aaPredicted RBP16.17■□□□□ 0.18
CHD1L-202ENST00000369258 FOXD4L4Q8WXT5 416 aaPredicted RBP16.17■□□□□ 0.18
CHD1L-202ENST00000369258 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
CHD1L-202ENST00000369258 QRICH2Q9H0J4 1663 aa16.16■□□□□ 0.18
CHD1L-202ENST00000369258 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
CHD1L-202ENST00000369258 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
CHD1L-202ENST00000369258 CT47B1P0C2W7 299 aaPredicted RBP16.16■□□□□ 0.18
CHD1L-202ENST00000369258 HDAC1Q13547 482 aaPredicted RBP16.16■□□□□ 0.18
CHD1L-202ENST00000369258 OTUD7AQ8TE49 926 aaPredicted RBP16.16■□□□□ 0.18
CHD1L-202ENST00000369258 SIRT2Q8IXJ6 389 aa16.15■□□□□ 0.18
CHD1L-202ENST00000369258 SMC5Q8IY18 1101 aa16.15■□□□□ 0.18
CHD1L-202ENST00000369258 ZBTB7CA1YPR0 619 aa16.15■□□□□ 0.18
CHD1L-202ENST00000369258 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
CHD1L-202ENST00000369258 TPRNQ4KMQ1 711 aa16.15■□□□□ 0.18
CHD1L-202ENST00000369258 SSFA2P28290 1259 aa16.14■□□□□ 0.17
CHD1L-202ENST00000369258 KIF2CQ99661 725 aa16.14■□□□□ 0.17
CHD1L-202ENST00000369258 PNNQ9H307 717 aaKnown RBP16.14■□□□□ 0.17
CHD1L-202ENST00000369258 PKP1Q13835 747 aa16.14■□□□□ 0.17
CHD1L-202ENST00000369258 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
CHD1L-202ENST00000369258 NEURL4Q96JN8 1562 aa16.14■□□□□ 0.17
CHD1L-202ENST00000369258 TULP4Q9NRJ4 1543 aa16.14■□□□□ 0.17
CHD1L-202ENST00000369258 VWDEQ8N2E2 1590 aa16.14■□□□□ 0.17
CHD1L-202ENST00000369258 DDX11L8A8MPP1 907 aa16.14■□□□□ 0.17
CHD1L-202ENST00000369258 MRE11P49959 708 aa16.14■□□□□ 0.17
CHD1L-202ENST00000369258 NUCB1Q02818 461 aa16.13■□□□□ 0.17
CHD1L-202ENST00000369258 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
CHD1L-202ENST00000369258 ANKRD36BQ8N2N9 1353 aa16.13■□□□□ 0.17
CHD1L-202ENST00000369258 GAS2L2Q8NHY3 880 aa16.13■□□□□ 0.17
CHD1L-202ENST00000369258 SMARCA5O60264 1052 aaPredicted RBP16.12■□□□□ 0.17
CHD1L-202ENST00000369258 GRPEL1Q9HAV7 217 aa16.12■□□□□ 0.17
CHD1L-202ENST00000369258 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
CHD1L-202ENST00000369258 EFCAB6Q5THR3 1501 aa16.12■□□□□ 0.17
CHD1L-202ENST00000369258 C8orf58Q8NAV2 365 aa16.11■□□□□ 0.17
CHD1L-202ENST00000369258 ADGRB1O14514 1584 aa16.11■□□□□ 0.17
CHD1L-202ENST00000369258 NRXN1Q9ULB1 1477 aa16.11■□□□□ 0.17
CHD1L-202ENST00000369258 NCLP19338 710 aaKnown RBP16.11■□□□□ 0.17
CHD1L-202ENST00000369258 ASXL2Q76L83 1435 aa16.11■□□□□ 0.17
CHD1L-202ENST00000369258 DTNBO60941 627 aa16.11■□□□□ 0.17
CHD1L-202ENST00000369258 MYO3AQ8NEV4 1616 aa16.1■□□□□ 0.17
CHD1L-202ENST00000369258 CLCN1P35523 988 aa16.1■□□□□ 0.17
CHD1L-202ENST00000369258 TSHZ3Q63HK5 1081 aa16.1■□□□□ 0.17
CHD1L-202ENST00000369258 MIS18AQ9NYP9 233 aa16.1■□□□□ 0.17
CHD1L-202ENST00000369258 ZBTB7BO15156 539 aaPredicted RBP16.09■□□□□ 0.17
CHD1L-202ENST00000369258 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
CHD1L-202ENST00000369258 FOXD4L6Q3SYB3 417 aaPredicted RBP16.09■□□□□ 0.17
CHD1L-202ENST00000369258 FOXD4L3Q6VB84 417 aaPredicted RBP16.09■□□□□ 0.17
CHD1L-202ENST00000369258 NME9Q86XW9 330 aa16.09■□□□□ 0.17
CHD1L-202ENST00000369258 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
CHD1L-202ENST00000369258 MLECQ14165 292 aa16.09■□□□□ 0.17
CHD1L-202ENST00000369258 IPO8O15397 1037 aaKnown RBP16.08■□□□□ 0.17
CHD1L-202ENST00000369258 MBIPQ9NS73 344 aa16.08■□□□□ 0.17
CHD1L-202ENST00000369258 POLKQ9UBT6 870 aa16.08■□□□□ 0.17
CHD1L-202ENST00000369258 INO80Q9ULG1 1556 aaPredicted RBP16.08■□□□□ 0.17
CHD1L-202ENST00000369258 UHRF1BP1LA0JNW5 1464 aa16.08■□□□□ 0.16
CHD1L-202ENST00000369258 NOL8Q76FK4 1167 aaKnown RBP16.08■□□□□ 0.16
CHD1L-202ENST00000369258 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
CHD1L-202ENST00000369258 KIDINS220Q9ULH0 1771 aa16.08■□□□□ 0.16
CHD1L-202ENST00000369258 ARAP3Q8WWN8 1544 aa16.08■□□□□ 0.16
CHD1L-202ENST00000369258 VAMP4O75379 141 aa16.08■□□□□ 0.16
CHD1L-202ENST00000369258 NSD2O96028 1365 aa16.07■□□□□ 0.16
CHD1L-202ENST00000369258 GSPT1P15170 499 aaKnown RBP16.07■□□□□ 0.16
CHD1L-202ENST00000369258 SETBP1Q9Y6X0 1596 aa16.07■□□□□ 0.16
CHD1L-202ENST00000369258 RBM25P49756 843 aaKnown RBP16.06■□□□□ 0.16
CHD1L-202ENST00000369258 AEBP1Q8IUX7 1158 aa16.06■□□□□ 0.16
CHD1L-202ENST00000369258 SNX21Q969T3 373 aa16.06■□□□□ 0.16
CHD1L-202ENST00000369258 ADGRB3O60242 1522 aa16.06■□□□□ 0.16
CHD1L-202ENST00000369258 GBP4Q96PP9 640 aa16.05■□□□□ 0.16
CHD1L-202ENST00000369258 ARID3AQ99856 593 aa16.05■□□□□ 0.16
CHD1L-202ENST00000369258 GLI2P10070 1586 aa16.05■□□□□ 0.16
CHD1L-202ENST00000369258 KIF16BQ96L93 1317 aa16.05■□□□□ 0.16
CHD1L-202ENST00000369258 TERF2IPQ9NYB0 399 aa16.05■□□□□ 0.16
CHD1L-202ENST00000369258 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
CHD1L-202ENST00000369258 MPNDQ8N594 471 aa16.05■□□□□ 0.16
CHD1L-202ENST00000369258 IFT172Q9UG01 1749 aa16.04■□□□□ 0.16
CHD1L-202ENST00000369258 CAMSAP1Q5T5Y3 1602 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms