RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 FOXD4L1Q9NU39 408 aa24.67■■□□□ 1.54
TRIM58-201ENST00000366481 TMPOP42166 694 aaKnown RBP24.67■■□□□ 1.54
TRIM58-201ENST00000366481 RIPK4P57078 832 aa24.67■■□□□ 1.54
TRIM58-201ENST00000366481 NGEFQ8N5V2 710 aa24.67■■□□□ 1.54
TRIM58-201ENST00000366481 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
TRIM58-201ENST00000366481 RWDD1Q9H446 243 aaPredicted RBP24.67■■□□□ 1.54
TRIM58-201ENST00000366481 TRIM27P14373 513 aa24.66■■□□□ 1.54
TRIM58-201ENST00000366481 MVPQ14764 893 aaKnown RBP24.66■■□□□ 1.54
TRIM58-201ENST00000366481 FYB1O15117 783 aa24.65■■□□□ 1.54
TRIM58-201ENST00000366481 NOB1Q9ULX3 412 aaKnown RBP24.65■■□□□ 1.54
TRIM58-201ENST00000366481 CABP1Q9NZU7 370 aa24.65■■□□□ 1.54
TRIM58-201ENST00000366481 NRXN1Q9ULB1 1477 aa24.65■■□□□ 1.54
TRIM58-201ENST00000366481 ADGRB3O60242 1522 aa24.65■■□□□ 1.54
TRIM58-201ENST00000366481 HMOX1P09601 288 aa24.65■■□□□ 1.54
TRIM58-201ENST00000366481 TRIM35Q9UPQ4 493 aa24.64■■□□□ 1.54
TRIM58-201ENST00000366481 DDX11L8A8MPP1 907 aa24.63■■□□□ 1.53
TRIM58-201ENST00000366481 ADGRB1O14514 1584 aa24.63■■□□□ 1.53
TRIM58-201ENST00000366481 ANP32BQ92688 251 aaKnown RBP24.63■■□□□ 1.53
TRIM58-201ENST00000366481 ANKRD36BQ8N2N9 1353 aa24.63■■□□□ 1.53
TRIM58-201ENST00000366481 WAPLQ7Z5K2 1190 aa24.63■■□□□ 1.53
TRIM58-201ENST00000366481 KIAA1210Q9ULL0 1709 aa24.62■■□□□ 1.53
TRIM58-201ENST00000366481 ARID3AQ99856 593 aa24.62■■□□□ 1.53
TRIM58-201ENST00000366481 HSP90AB1P08238 724 aaKnown RBP24.61■■□□□ 1.53
TRIM58-201ENST00000366481 POGZQ7Z3K3 1410 aa24.61■■□□□ 1.53
TRIM58-201ENST00000366481 QRICH2Q9H0J4 1663 aa24.61■■□□□ 1.53
TRIM58-201ENST00000366481 TMEM57Q8N5G2 664 aa24.6■■□□□ 1.53
TRIM58-201ENST00000366481 ERBB4Q15303 1308 aa24.59■■□□□ 1.53
TRIM58-201ENST00000366481 RPGRIP1LQ68CZ1 1315 aa24.59■■□□□ 1.53
TRIM58-201ENST00000366481 SHPRHQ149N8 1683 aa24.59■■□□□ 1.53
TRIM58-201ENST00000366481 C1orf115Q9H7X2 142 aa24.59■■□□□ 1.53
TRIM58-201ENST00000366481 TULP4Q9NRJ4 1543 aa24.59■■□□□ 1.53
TRIM58-201ENST00000366481 CDK19Q9BWU1 502 aa24.58■■□□□ 1.53
TRIM58-201ENST00000366481 FRMPD1Q5SYB0 1578 aa24.58■■□□□ 1.53
TRIM58-201ENST00000366481 PLEKHF1Q96S99 279 aa24.58■■□□□ 1.53
TRIM58-201ENST00000366481 IQSEC2Q5JU85 1478 aa24.58■■□□□ 1.53
TRIM58-201ENST00000366481 DIAPH1O60610 1272 aaKnown RBP24.57■■□□□ 1.52
TRIM58-201ENST00000366481 RBM10P98175 930 aaKnown RBP24.57■■□□□ 1.52
TRIM58-201ENST00000366481 CCDC27Q2M243 656 aa24.56■■□□□ 1.52
TRIM58-201ENST00000366481 KIAA1211Q6ZU35 1233 aa24.56■■□□□ 1.52
TRIM58-201ENST00000366481 LNPKQ9C0E8 428 aa24.56■■□□□ 1.52
TRIM58-201ENST00000366481 TERF2IPQ9NYB0 399 aa24.56■■□□□ 1.52
TRIM58-201ENST00000366481 ZRANB1Q9UGI0 708 aa24.56■■□□□ 1.52
TRIM58-201ENST00000366481 PRKAR2BP31323 418 aa24.55■■□□□ 1.52
TRIM58-201ENST00000366481 ATF7IPQ6VMQ6 1270 aa24.54■■□□□ 1.52
TRIM58-201ENST00000366481 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
TRIM58-201ENST00000366481 NINLQ9Y2I6 1382 aa24.54■■□□□ 1.52
TRIM58-201ENST00000366481 ABCC3O15438 1527 aa24.54■■□□□ 1.52
TRIM58-201ENST00000366481 GBP4Q96PP9 640 aa24.54■■□□□ 1.52
TRIM58-201ENST00000366481 YEATS2Q9ULM3 1422 aa24.53■■□□□ 1.52
TRIM58-201ENST00000366481 IFT172Q9UG01 1749 aa24.53■■□□□ 1.52
TRIM58-201ENST00000366481 NCLP19338 710 aaKnown RBP24.53■■□□□ 1.52
TRIM58-201ENST00000366481 MSNP26038 577 aaKnown RBP24.52■■□□□ 1.52
TRIM58-201ENST00000366481 PHACTR3Q96KR7 559 aa24.52■■□□□ 1.52
TRIM58-201ENST00000366481 GLI2P10070 1586 aa24.52■■□□□ 1.52
TRIM58-201ENST00000366481 HDGFL2Q7Z4V5 671 aaPredicted RBP24.51■■□□□ 1.51
TRIM58-201ENST00000366481 EMILIN1Q9Y6C2 1016 aa24.5■■□□□ 1.51
TRIM58-201ENST00000366481 GAS2L3Q86XJ1 694 aa24.5■■□□□ 1.51
TRIM58-201ENST00000366481 LMTK2Q8IWU2 1503 aa24.5■■□□□ 1.51
TRIM58-201ENST00000366481 TPM2P07951 284 aa24.5■■□□□ 1.51
TRIM58-201ENST00000366481 FAM13BQ9NYF5 915 aa24.5■■□□□ 1.51
TRIM58-201ENST00000366481 TNPO1Q92973 898 aaKnown RBP24.49■■□□□ 1.51
TRIM58-201ENST00000366481 SETBP1Q9Y6X0 1596 aa24.49■■□□□ 1.51
TRIM58-201ENST00000366481 NUTM2FA1L443 756 aa24.49■■□□□ 1.51
TRIM58-201ENST00000366481 TSPYL6Q8N831 410 aa24.48■■□□□ 1.51
TRIM58-201ENST00000366481 ESF1Q9H501 851 aaKnown RBP24.48■■□□□ 1.51
TRIM58-201ENST00000366481 PPLO60437 1756 aa24.48■■□□□ 1.51
TRIM58-201ENST00000366481 MYO3AQ8NEV4 1616 aa24.47■■□□□ 1.51
TRIM58-201ENST00000366481 ABCC11Q96J66 1382 aa24.47■■□□□ 1.51
TRIM58-201ENST00000366481 DDX19BQ9UMR2 479 aa24.47■■□□□ 1.51
TRIM58-201ENST00000366481 MLH3Q9UHC1 1453 aa24.47■■□□□ 1.51
TRIM58-201ENST00000366481 SOX12O15370 315 aa24.46■■□□□ 1.51
TRIM58-201ENST00000366481 DCTN1Q14203 1278 aa24.46■■□□□ 1.51
TRIM58-201ENST00000366481 PDCL3Q9H2J4 239 aa24.46■■□□□ 1.51
TRIM58-201ENST00000366481 SIGLEC1Q9BZZ2 1709 aa24.46■■□□□ 1.51
TRIM58-201ENST00000366481 NLRP1Q9C000 1473 aa24.46■■□□□ 1.51
TRIM58-201ENST00000366481 RRS1Q15050 365 aaKnown RBP24.45■■□□□ 1.5
TRIM58-201ENST00000366481 GOLGA6L22H0YM25 854 aa24.45■■□□□ 1.5
TRIM58-201ENST00000366481 NASPP49321 788 aaPredicted RBP24.45■■□□□ 1.5
TRIM58-201ENST00000366481 SLC52A1Q9NWF4 448 aa24.45■■□□□ 1.5
TRIM58-201ENST00000366481 NME9Q86XW9 330 aa24.44■■□□□ 1.5
TRIM58-201ENST00000366481 NEURL4Q96JN8 1562 aa24.44■■□□□ 1.5
TRIM58-201ENST00000366481 FAM83GA6ND36 823 aa24.44■■□□□ 1.5
TRIM58-201ENST00000366481 CAMSAP1Q5T5Y3 1602 aa24.44■■□□□ 1.5
TRIM58-201ENST00000366481 POLKQ9UBT6 870 aa24.44■■□□□ 1.5
TRIM58-201ENST00000366481 DDX49Q9Y6V7 483 aaKnown RBP24.42■■□□□ 1.5
TRIM58-201ENST00000366481 R3HCC1Q9Y3T6 440 aaKnown RBP24.42■■□□□ 1.5
TRIM58-201ENST00000366481 HECW2Q9P2P5 1572 aa24.42■■□□□ 1.5
TRIM58-201ENST00000366481 NEXMIFQ5QGS0 1516 aa24.42■■□□□ 1.5
TRIM58-201ENST00000366481 ISY1Q9ULR0 285 aaKnown RBP24.42■■□□□ 1.5
TRIM58-201ENST00000366481 ZBTB7CA1YPR0 619 aa24.41■■□□□ 1.5
TRIM58-201ENST00000366481 ANKRD45Q5TZF3 282 aa24.41■■□□□ 1.5
TRIM58-201ENST00000366481 NSD2O96028 1365 aa24.41■■□□□ 1.5
TRIM58-201ENST00000366481 ZBTB40Q9NUA8 1239 aa24.41■■□□□ 1.5
TRIM58-201ENST00000366481 TXNDC2Q86VQ3 553 aa24.4■■□□□ 1.5
TRIM58-201ENST00000366481 SKOR2Q2VWA4 1001 aaPredicted RBP24.4■■□□□ 1.5
TRIM58-201ENST00000366481 YTHDC2Q9H6S0 1430 aaKnown RBP24.4■■□□□ 1.5
TRIM58-201ENST00000366481 ATAD2Q6PL18 1390 aa24.38■■□□□ 1.49
TRIM58-201ENST00000366481 ZC3H13Q5T200 1668 aaKnown RBP24.37■■□□□ 1.49
TRIM58-201ENST00000366481 AAMPQ13685 434 aa24.37■■□□□ 1.49
TRIM58-201ENST00000366481 APBB1O00213 710 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms