RNA–Protein interactions for RNA: ENST00000360115.8

MACF1-202, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-202ENST00000360115 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
MACF1-202ENST00000360115 ITPRIPQ8IWB1 547 aa16.82■□□□□ 0.28
MACF1-202ENST00000360115 SSH1Q8WYL5 1049 aa16.82■□□□□ 0.28
MACF1-202ENST00000360115 TSR2Q969E8 191 aaKnown RBP16.82■□□□□ 0.28
MACF1-202ENST00000360115 GLI2P10070 1586 aa16.81■□□□□ 0.28
MACF1-202ENST00000360115 COL3A1P02461 1466 aaPredicted RBP16.81■□□□□ 0.28
MACF1-202ENST00000360115 ARHGEF28Q8N1W1 1705 aaKnown RBP16.81■□□□□ 0.28
MACF1-202ENST00000360115 KIDINS220Q9ULH0 1771 aa16.81■□□□□ 0.28
MACF1-202ENST00000360115 PLEKHF1Q96S99 279 aa16.8■□□□□ 0.28
MACF1-202ENST00000360115 ZBTB40Q9NUA8 1239 aa16.8■□□□□ 0.28
MACF1-202ENST00000360115 CFAP74Q9C0B2 1584 aa16.8■□□□□ 0.28
MACF1-202ENST00000360115 RPGRIP1LQ68CZ1 1315 aa16.8■□□□□ 0.28
MACF1-202ENST00000360115 EVC2Q86UK5 1308 aa16.79■□□□□ 0.28
MACF1-202ENST00000360115 TMPOP42166 694 aaKnown RBP16.79■□□□□ 0.28
MACF1-202ENST00000360115 NUCB1Q02818 461 aa16.79■□□□□ 0.28
MACF1-202ENST00000360115 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
MACF1-202ENST00000360115 KIF16BQ96L93 1317 aa16.79■□□□□ 0.28
MACF1-202ENST00000360115 PTMSP20962 102 aa16.79■□□□□ 0.28
MACF1-202ENST00000360115 TRIM35Q9UPQ4 493 aa16.79■□□□□ 0.28
MACF1-202ENST00000360115 TMEM57Q8N5G2 664 aa16.78■□□□□ 0.28
MACF1-202ENST00000360115 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
MACF1-202ENST00000360115 GBP4Q96PP9 640 aa16.77■□□□□ 0.28
MACF1-202ENST00000360115 ANKRD26Q9UPS8 1709 aa16.77■□□□□ 0.27
MACF1-202ENST00000360115 NPATQ14207 1427 aa16.76■□□□□ 0.27
MACF1-202ENST00000360115 IPO8O15397 1037 aaKnown RBP16.76■□□□□ 0.27
MACF1-202ENST00000360115 RAB3GAP1Q15042 981 aa16.76■□□□□ 0.27
MACF1-202ENST00000360115 SKOR2Q2VWA4 1001 aaPredicted RBP16.76■□□□□ 0.27
MACF1-202ENST00000360115 TNPO1Q92973 898 aaKnown RBP16.76■□□□□ 0.27
MACF1-202ENST00000360115 MED14O60244 1454 aa16.76■□□□□ 0.27
MACF1-202ENST00000360115 ESPNB1AK53 854 aa16.75■□□□□ 0.27
MACF1-202ENST00000360115 TMEM132EQ6IEE7 984 aa16.75■□□□□ 0.27
MACF1-202ENST00000360115 CHGAP10645 457 aaKnown RBP16.75■□□□□ 0.27
MACF1-202ENST00000360115 BMP2KLQ5H9B9 411 aa16.75■□□□□ 0.27
MACF1-202ENST00000360115 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
MACF1-202ENST00000360115 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
MACF1-202ENST00000360115 CHD1LQ86WJ1 897 aa16.74■□□□□ 0.27
MACF1-202ENST00000360115 REREQ9P2R6 1566 aa16.74■□□□□ 0.27
MACF1-202ENST00000360115 HECW2Q9P2P5 1572 aa16.73■□□□□ 0.27
MACF1-202ENST00000360115 GLIPR1L2Q4G1C9 344 aa16.73■□□□□ 0.27
MACF1-202ENST00000360115 A0A1W2PP64 1363 aa16.72■□□□□ 0.27
MACF1-202ENST00000360115 PIK3C2BO00750 1634 aa16.72■□□□□ 0.27
MACF1-202ENST00000360115 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
MACF1-202ENST00000360115 RRP9O43818 475 aaKnown RBP16.72■□□□□ 0.27
MACF1-202ENST00000360115 HSP90AA1P07900 732 aaKnown RBP16.72■□□□□ 0.27
MACF1-202ENST00000360115 BRPF1P55201 1214 aaPredicted RBP16.72■□□□□ 0.27
MACF1-202ENST00000360115 KIF2CQ99661 725 aa16.72■□□□□ 0.27
MACF1-202ENST00000360115 LNPKQ9C0E8 428 aa16.72■□□□□ 0.27
MACF1-202ENST00000360115 ERBB4Q15303 1308 aa16.71■□□□□ 0.27
MACF1-202ENST00000360115 CAMSAP1Q5T5Y3 1602 aa16.71■□□□□ 0.27
MACF1-202ENST00000360115 CDC42BPGQ6DT37 1551 aa16.71■□□□□ 0.27
MACF1-202ENST00000360115 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
MACF1-202ENST00000360115 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
MACF1-202ENST00000360115 GAS2L3Q86XJ1 694 aa16.7■□□□□ 0.26
MACF1-202ENST00000360115 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
MACF1-202ENST00000360115 GCC1Q96CN9 775 aa16.69■□□□□ 0.26
MACF1-202ENST00000360115 TRIM44Q96DX7 344 aaPredicted RBP16.69■□□□□ 0.26
MACF1-202ENST00000360115 RIPK4P57078 832 aa16.69■□□□□ 0.26
MACF1-202ENST00000360115 FRMPD1Q5SYB0 1578 aa16.69■□□□□ 0.26
MACF1-202ENST00000360115 PIK3R4Q99570 1358 aa16.69■□□□□ 0.26
MACF1-202ENST00000360115 K7ELQ4 463 aaPredicted RBP16.69■□□□□ 0.26
MACF1-202ENST00000360115 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
MACF1-202ENST00000360115 CHMP4BQ9H444 224 aaKnown RBP16.69■□□□□ 0.26
MACF1-202ENST00000360115 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
MACF1-202ENST00000360115 ARHGAP31Q2M1Z3 1444 aa16.68■□□□□ 0.26
MACF1-202ENST00000360115 PNPLA6Q8IY17 1366 aa16.68■□□□□ 0.26
MACF1-202ENST00000360115 IBTKQ9P2D0 1353 aaPredicted RBP16.68■□□□□ 0.26
MACF1-202ENST00000360115 ABCC3O15438 1527 aa16.67■□□□□ 0.26
MACF1-202ENST00000360115 PTCH1Q13635 1447 aa16.67■□□□□ 0.26
MACF1-202ENST00000360115 CLTCQ00610 1675 aaKnown RBP16.67■□□□□ 0.26
MACF1-202ENST00000360115 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
MACF1-202ENST00000360115 ZFYVE9O95405 1425 aa16.66■□□□□ 0.26
MACF1-202ENST00000360115 VGFO15240 615 aaPredicted RBP16.65■□□□□ 0.26
MACF1-202ENST00000360115 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
MACF1-202ENST00000360115 ATAD2Q6PL18 1390 aa16.65■□□□□ 0.26
MACF1-202ENST00000360115 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
MACF1-202ENST00000360115 CD2BP2O95400 341 aaKnown RBP16.65■□□□□ 0.26
MACF1-202ENST00000360115 CCDC173Q0VFZ6 552 aa16.65■□□□□ 0.26
MACF1-202ENST00000360115 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
MACF1-202ENST00000360115 CFAP65Q6ZU64 1925 aaKnown RBP16.65■□□□□ 0.26
MACF1-202ENST00000360115 ZBTB7BO15156 539 aaPredicted RBP16.65■□□□□ 0.26
MACF1-202ENST00000360115 DIAPH1O60610 1272 aaKnown RBP16.65■□□□□ 0.26
MACF1-202ENST00000360115 PLEKHG5O94827 1062 aa16.65■□□□□ 0.26
MACF1-202ENST00000360115 TBC1D9Q6ZT07 1266 aa16.65■□□□□ 0.26
MACF1-202ENST00000360115 ARHGAP45Q92619 1136 aa16.65■□□□□ 0.26
MACF1-202ENST00000360115 CD163L1Q9NR16 1453 aa16.64■□□□□ 0.25
MACF1-202ENST00000360115 SIGLEC1Q9BZZ2 1709 aa16.64■□□□□ 0.25
MACF1-202ENST00000360115 GOLGA6L22H0YM25 854 aa16.64■□□□□ 0.25
MACF1-202ENST00000360115 TPM2P07951 284 aa16.64■□□□□ 0.25
MACF1-202ENST00000360115 ANKRD45Q5TZF3 282 aa16.64■□□□□ 0.25
MACF1-202ENST00000360115 FAM135BQ49AJ0 1406 aa16.63■□□□□ 0.25
MACF1-202ENST00000360115 FYB1O15117 783 aa16.63■□□□□ 0.25
MACF1-202ENST00000360115 MLH3Q9UHC1 1453 aa16.63■□□□□ 0.25
MACF1-202ENST00000360115 KLHL40Q2TBA0 621 aa16.62■□□□□ 0.25
MACF1-202ENST00000360115 TERF2IPQ9NYB0 399 aa16.62■□□□□ 0.25
MACF1-202ENST00000360115 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
MACF1-202ENST00000360115 FCHSD2O94868 740 aa16.62■□□□□ 0.25
MACF1-202ENST00000360115 SSFA2P28290 1259 aa16.61■□□□□ 0.25
MACF1-202ENST00000360115 GAS2L2Q8NHY3 880 aa16.61■□□□□ 0.25
MACF1-202ENST00000360115 POGZQ7Z3K3 1410 aa16.61■□□□□ 0.25
MACF1-202ENST00000360115 CDC45O75419 566 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms