RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 SLC24A1O60721 1099 aa18.08■□□□□ 0.48
APP-205ENST00000358918 NEXMIFQ5QGS0 1516 aa18.08■□□□□ 0.48
APP-205ENST00000358918 ADGRB1O14514 1584 aa18.07■□□□□ 0.48
APP-205ENST00000358918 MLECQ14165 292 aa18.07■□□□□ 0.48
APP-205ENST00000358918 PREX1Q8TCU6 1659 aa18.07■□□□□ 0.48
APP-205ENST00000358918 PTMSP20962 102 aa18.06■□□□□ 0.48
APP-205ENST00000358918 GBP4Q96PP9 640 aa18.06■□□□□ 0.48
APP-205ENST00000358918 NCOA3Q9Y6Q9 1424 aa18.06■□□□□ 0.48
APP-205ENST00000358918 POLR3AO14802 1390 aaPredicted RBP18.06■□□□□ 0.48
APP-205ENST00000358918 SKOR2Q2VWA4 1001 aaPredicted RBP18.06■□□□□ 0.48
APP-205ENST00000358918 BCL2L13Q9BXK5 485 aa18.06■□□□□ 0.48
APP-205ENST00000358918 PDCL3Q9H2J4 239 aa18.06■□□□□ 0.48
APP-205ENST00000358918 NEUROD2Q15784 382 aa18.05■□□□□ 0.48
APP-205ENST00000358918 MYO3AQ8NEV4 1616 aa18.05■□□□□ 0.48
APP-205ENST00000358918 DDIT3P35638 169 aa18.05■□□□□ 0.48
APP-205ENST00000358918 MVPQ14764 893 aaKnown RBP18.05■□□□□ 0.48
APP-205ENST00000358918 RUNDC1Q96C34 613 aa18.04■□□□□ 0.48
APP-205ENST00000358918 CIZ1Q9ULV3 898 aaPredicted RBP18.04■□□□□ 0.48
APP-205ENST00000358918 SBNO2Q9Y2G9 1366 aa18.04■□□□□ 0.48
APP-205ENST00000358918 WDR63Q8IWG1 891 aa18.04■□□□□ 0.48
APP-205ENST00000358918 GAS2L3Q86XJ1 694 aa18.03■□□□□ 0.48
APP-205ENST00000358918 TNPO1Q92973 898 aaKnown RBP18.03■□□□□ 0.48
APP-205ENST00000358918 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
APP-205ENST00000358918 KIF13AQ9H1H9 1805 aa18.03■□□□□ 0.48
APP-205ENST00000358918 SNX21Q969T3 373 aa18.02■□□□□ 0.48
APP-205ENST00000358918 MYO5BQ9ULV0 1848 aa18.02■□□□□ 0.47
APP-205ENST00000358918 CCDC173Q0VFZ6 552 aa18.02■□□□□ 0.47
APP-205ENST00000358918 SMC5Q8IY18 1101 aa18.02■□□□□ 0.47
APP-205ENST00000358918 FTSJ3Q8IY81 847 aaKnown RBP18.02■□□□□ 0.47
APP-205ENST00000358918 REREQ9P2R6 1566 aa18.01■□□□□ 0.47
APP-205ENST00000358918 AGLP35573 1532 aa18.01■□□□□ 0.47
APP-205ENST00000358918 KIAA1211Q6ZU35 1233 aa18.01■□□□□ 0.47
APP-205ENST00000358918 CARD14Q9BXL6 1004 aa18.01■□□□□ 0.47
APP-205ENST00000358918 HSP90AB1P08238 724 aaKnown RBP18.01■□□□□ 0.47
APP-205ENST00000358918 TCP11L2Q8N4U5 519 aa18.01■□□□□ 0.47
APP-205ENST00000358918 TMEM131LA2VDJ0 1609 aa18■□□□□ 0.47
APP-205ENST00000358918 QRICH2Q9H0J4 1663 aa18■□□□□ 0.47
APP-205ENST00000358918 IQSEC2Q5JU85 1478 aa18■□□□□ 0.47
APP-205ENST00000358918 ZKSCAN2Q63HK3 967 aa18■□□□□ 0.47
APP-205ENST00000358918 DZIP1LQ8IYY4 767 aaKnown RBP18■□□□□ 0.47
APP-205ENST00000358918 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
APP-205ENST00000358918 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
APP-205ENST00000358918 RBM25P49756 843 aaKnown RBP17.99■□□□□ 0.47
APP-205ENST00000358918 HDAC1Q13547 482 aaPredicted RBP17.99■□□□□ 0.47
APP-205ENST00000358918 RAB3GAP1Q15042 981 aa17.99■□□□□ 0.47
APP-205ENST00000358918 ANP32BQ92688 251 aaKnown RBP17.99■□□□□ 0.47
APP-205ENST00000358918 CLTCQ00610 1675 aaKnown RBP17.98■□□□□ 0.47
APP-205ENST00000358918 STK26Q9P289 416 aa17.98■□□□□ 0.47
APP-205ENST00000358918 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
APP-205ENST00000358918 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
APP-205ENST00000358918 ZSCAN30Q86W11 494 aa17.98■□□□□ 0.47
APP-205ENST00000358918 ZFYVE9O95405 1425 aa17.97■□□□□ 0.47
APP-205ENST00000358918 PPP1R9BQ96SB3 815 aa17.97■□□□□ 0.47
APP-205ENST00000358918 CCDC27Q2M243 656 aa17.97■□□□□ 0.47
APP-205ENST00000358918 SLC12A5Q9H2X9 1139 aa17.97■□□□□ 0.47
APP-205ENST00000358918 NASPP49321 788 aaPredicted RBP17.96■□□□□ 0.47
APP-205ENST00000358918 OFD1O75665 1012 aa17.95■□□□□ 0.46
APP-205ENST00000358918 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.95■□□□□ 0.46
APP-205ENST00000358918 ARHGEF40Q8TER5 1519 aa17.95■□□□□ 0.46
APP-205ENST00000358918 MSNP26038 577 aaKnown RBP17.95■□□□□ 0.46
APP-205ENST00000358918 MORC1Q86VD1 984 aa17.95■□□□□ 0.46
APP-205ENST00000358918 SHPRHQ149N8 1683 aa17.94■□□□□ 0.46
APP-205ENST00000358918 ARHGEF28Q8N1W1 1705 aaKnown RBP17.94■□□□□ 0.46
APP-205ENST00000358918 GOLGA6L22H0YM25 854 aa17.94■□□□□ 0.46
APP-205ENST00000358918 DDX19BQ9UMR2 479 aa17.94■□□□□ 0.46
APP-205ENST00000358918 EVC2Q86UK5 1308 aa17.93■□□□□ 0.46
APP-205ENST00000358918 TERF1P54274 439 aa17.93■□□□□ 0.46
APP-205ENST00000358918 CALD1Q05682 793 aaKnown RBP17.93■□□□□ 0.46
APP-205ENST00000358918 CT47B1P0C2W7 299 aaPredicted RBP17.92■□□□□ 0.46
APP-205ENST00000358918 ESF1Q9H501 851 aaKnown RBP17.92■□□□□ 0.46
APP-205ENST00000358918 NSD3Q9BZ95 1437 aa17.92■□□□□ 0.46
APP-205ENST00000358918 ITPRIPQ8IWB1 547 aa17.91■□□□□ 0.46
APP-205ENST00000358918 CABP2Q9NPB3 220 aa17.91■□□□□ 0.46
APP-205ENST00000358918 SMC4Q9NTJ3 1288 aa17.91■□□□□ 0.46
APP-205ENST00000358918 IBTKQ9P2D0 1353 aaPredicted RBP17.91■□□□□ 0.46
APP-205ENST00000358918 TNNT2P45379 298 aaPredicted RBP17.9■□□□□ 0.46
APP-205ENST00000358918 TULP4Q9NRJ4 1543 aa17.9■□□□□ 0.46
APP-205ENST00000358918 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
APP-205ENST00000358918 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
APP-205ENST00000358918 MAP7D2Q96T17 732 aa17.9■□□□□ 0.46
APP-205ENST00000358918 SPATA31D1Q6ZQQ2 1576 aa17.9■□□□□ 0.46
APP-205ENST00000358918 TRIM27P14373 513 aa17.89■□□□□ 0.45
APP-205ENST00000358918 KLHL40Q2TBA0 621 aa17.88■□□□□ 0.45
APP-205ENST00000358918 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
APP-205ENST00000358918 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
APP-205ENST00000358918 K7ELQ4 463 aaPredicted RBP17.88■□□□□ 0.45
APP-205ENST00000358918 PRAM1Q96QH2 718 aa17.88■□□□□ 0.45
APP-205ENST00000358918 YTHDC2Q9H6S0 1430 aaKnown RBP17.87■□□□□ 0.45
APP-205ENST00000358918 NUCB1Q02818 461 aa17.87■□□□□ 0.45
APP-205ENST00000358918 DDX49Q9Y6V7 483 aaKnown RBP17.87■□□□□ 0.45
APP-205ENST00000358918 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
APP-205ENST00000358918 RIPK4P57078 832 aa17.87■□□□□ 0.45
APP-205ENST00000358918 RBM10P98175 930 aaKnown RBP17.87■□□□□ 0.45
APP-205ENST00000358918 ALKQ9UM73 1620 aa17.86■□□□□ 0.45
APP-205ENST00000358918 SSFA2P28290 1259 aa17.86■□□□□ 0.45
APP-205ENST00000358918 SRPK2P78362 688 aaKnown RBP17.86■□□□□ 0.45
APP-205ENST00000358918 HS1BP3Q53T59 392 aa17.86■□□□□ 0.45
APP-205ENST00000358918 ATF7IPQ6VMQ6 1270 aa17.86■□□□□ 0.45
APP-205ENST00000358918 PTPRMP28827 1452 aa17.85■□□□□ 0.45
APP-205ENST00000358918 CLEC17AQ6ZS10 378 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms