RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 SLC4A3P48751 1232 aa16.51■□□□□ 0.23
RNF220-202ENST00000355387 NEUROD2Q15784 382 aa16.51■□□□□ 0.23
RNF220-202ENST00000355387 DZIP1LQ8IYY4 767 aaKnown RBP16.51■□□□□ 0.23
RNF220-202ENST00000355387 AGLP35573 1532 aa16.51■□□□□ 0.23
RNF220-202ENST00000355387 TBC1D32Q96NH3 1257 aa16.51■□□□□ 0.23
RNF220-202ENST00000355387 PDZRN3Q9UPQ7 1066 aa16.51■□□□□ 0.23
RNF220-202ENST00000355387 CABP2Q9NPB3 220 aa16.51■□□□□ 0.23
RNF220-202ENST00000355387 TMPOP42166 694 aaKnown RBP16.5■□□□□ 0.23
RNF220-202ENST00000355387 ZNF428Q96B54 188 aa16.5■□□□□ 0.23
RNF220-202ENST00000355387 DDX19BQ9UMR2 479 aa16.49■□□□□ 0.23
RNF220-202ENST00000355387 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
RNF220-202ENST00000355387 RIMBP3CA6NJZ7 1639 aa16.49■□□□□ 0.23
RNF220-202ENST00000355387 RIMBP3BA6NNM3 1639 aa16.49■□□□□ 0.23
RNF220-202ENST00000355387 RIMBP3Q9UFD9 1639 aa16.49■□□□□ 0.23
RNF220-202ENST00000355387 TRIM35Q9UPQ4 493 aa16.49■□□□□ 0.23
RNF220-202ENST00000355387 LRRC7Q96NW7 1537 aa16.48■□□□□ 0.23
RNF220-202ENST00000355387 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
RNF220-202ENST00000355387 KIF16BQ96L93 1317 aa16.47■□□□□ 0.23
RNF220-202ENST00000355387 ALDH1L2Q3SY69 923 aa16.47■□□□□ 0.23
RNF220-202ENST00000355387 YEATS2Q9ULM3 1422 aa16.47■□□□□ 0.23
RNF220-202ENST00000355387 SPATA31D1Q6ZQQ2 1576 aa16.47■□□□□ 0.23
RNF220-202ENST00000355387 KNDC1Q76NI1 1749 aa16.47■□□□□ 0.23
RNF220-202ENST00000355387 FYB1O15117 783 aa16.47■□□□□ 0.23
RNF220-202ENST00000355387 FTSJ3Q8IY81 847 aaKnown RBP16.47■□□□□ 0.23
RNF220-202ENST00000355387 ANO8Q9HCE9 1232 aaPredicted RBP16.47■□□□□ 0.23
RNF220-202ENST00000355387 SEC24BO95487 1268 aa16.47■□□□□ 0.23
RNF220-202ENST00000355387 FAM135BQ49AJ0 1406 aa16.46■□□□□ 0.23
RNF220-202ENST00000355387 RAPGEF3O95398 923 aa16.46■□□□□ 0.23
RNF220-202ENST00000355387 SRPK2P78362 688 aaKnown RBP16.46■□□□□ 0.23
RNF220-202ENST00000355387 ATF7IPQ6VMQ6 1270 aa16.46■□□□□ 0.23
RNF220-202ENST00000355387 HDGFL2Q7Z4V5 671 aaPredicted RBP16.46■□□□□ 0.23
RNF220-202ENST00000355387 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
RNF220-202ENST00000355387 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
RNF220-202ENST00000355387 SMC5Q8IY18 1101 aa16.44■□□□□ 0.22
RNF220-202ENST00000355387 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
RNF220-202ENST00000355387 IPO8O15397 1037 aaKnown RBP16.44■□□□□ 0.22
RNF220-202ENST00000355387 FCHSD2O94868 740 aa16.44■□□□□ 0.22
RNF220-202ENST00000355387 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
RNF220-202ENST00000355387 SMC4Q9NTJ3 1288 aa16.44■□□□□ 0.22
RNF220-202ENST00000355387 DIAPH1O60610 1272 aaKnown RBP16.44■□□□□ 0.22
RNF220-202ENST00000355387 TRIM27P14373 513 aa16.44■□□□□ 0.22
RNF220-202ENST00000355387 MON2Q7Z3U7 1717 aa16.43■□□□□ 0.22
RNF220-202ENST00000355387 MAP2P11137 1827 aaKnown RBP16.43■□□□□ 0.22
RNF220-202ENST00000355387 BCL2L13Q9BXK5 485 aa16.42■□□□□ 0.22
RNF220-202ENST00000355387 PIK3R4Q99570 1358 aa16.42■□□□□ 0.22
RNF220-202ENST00000355387 SSH1Q8WYL5 1049 aa16.42■□□□□ 0.22
RNF220-202ENST00000355387 PRAM1Q96QH2 718 aa16.42■□□□□ 0.22
RNF220-202ENST00000355387 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
RNF220-202ENST00000355387 CHMP4BQ9H444 224 aaKnown RBP16.42■□□□□ 0.22
RNF220-202ENST00000355387 CDK12Q9NYV4 1490 aaPredicted RBP16.42■□□□□ 0.22
RNF220-202ENST00000355387 IL27Q8NEV9 243 aa16.41■□□□□ 0.22
RNF220-202ENST00000355387 AKAP12Q02952 1782 aa16.4■□□□□ 0.22
RNF220-202ENST00000355387 U2SURPO15042 1029 aaKnown RBP16.4■□□□□ 0.22
RNF220-202ENST00000355387 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
RNF220-202ENST00000355387 ZBTB40Q9NUA8 1239 aa16.4■□□□□ 0.22
RNF220-202ENST00000355387 POGKQ9P215 609 aa16.4■□□□□ 0.22
RNF220-202ENST00000355387 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
RNF220-202ENST00000355387 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
RNF220-202ENST00000355387 A2ML1A8K2U0 1454 aa16.4■□□□□ 0.22
RNF220-202ENST00000355387 NRXN3Q9Y4C0 1643 aa16.39■□□□□ 0.21
RNF220-202ENST00000355387 RIPK4P57078 832 aa16.39■□□□□ 0.21
RNF220-202ENST00000355387 ARHGAP45Q92619 1136 aa16.39■□□□□ 0.21
RNF220-202ENST00000355387 AATKQ6ZMQ8 1374 aa16.39■□□□□ 0.21
RNF220-202ENST00000355387 CPSF1Q10570 1443 aaKnown RBP16.39■□□□□ 0.21
RNF220-202ENST00000355387 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.21
RNF220-202ENST00000355387 NUTM2DQ5VT03 806 aaPredicted RBP16.39■□□□□ 0.21
RNF220-202ENST00000355387 MINK1Q8N4C8 1332 aaPredicted RBP16.38■□□□□ 0.21
RNF220-202ENST00000355387 CDK19Q9BWU1 502 aa16.38■□□□□ 0.21
RNF220-202ENST00000355387 TBC1D2Q9BYX2 928 aa16.38■□□□□ 0.21
RNF220-202ENST00000355387 NRKQ7Z2Y5 1582 aa16.38■□□□□ 0.21
RNF220-202ENST00000355387 RSPH6AQ9H0K4 717 aa16.37■□□□□ 0.21
RNF220-202ENST00000355387 STK26Q9P289 416 aa16.37■□□□□ 0.21
RNF220-202ENST00000355387 NOB1Q9ULX3 412 aaKnown RBP16.37■□□□□ 0.21
RNF220-202ENST00000355387 ITSN1Q15811 1721 aa16.37■□□□□ 0.21
RNF220-202ENST00000355387 DLG5Q8TDM6 1919 aa16.37■□□□□ 0.21
RNF220-202ENST00000355387 C3P01024 1663 aa16.36■□□□□ 0.21
RNF220-202ENST00000355387 DIP2BQ9P265 1576 aa16.36■□□□□ 0.21
RNF220-202ENST00000355387 ITPRIPQ8IWB1 547 aa16.36■□□□□ 0.21
RNF220-202ENST00000355387 NCOA3Q9Y6Q9 1424 aa16.36■□□□□ 0.21
RNF220-202ENST00000355387 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
RNF220-202ENST00000355387 NUCB1Q02818 461 aa16.35■□□□□ 0.21
RNF220-202ENST00000355387 CPS1P31327 1500 aa16.35■□□□□ 0.21
RNF220-202ENST00000355387 TECPR2O15040 1411 aa16.35■□□□□ 0.21
RNF220-202ENST00000355387 SAFB2Q14151 953 aaKnown RBP eCLIP16.34■□□□□ 0.21
RNF220-202ENST00000355387 TMEM57Q8N5G2 664 aa16.34■□□□□ 0.21
RNF220-202ENST00000355387 SIRT1Q96EB6 747 aa16.34■□□□□ 0.21
RNF220-202ENST00000355387 C22orf23Q9BZE7 217 aa16.34■□□□□ 0.21
RNF220-202ENST00000355387 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
RNF220-202ENST00000355387 NFE2L2Q16236 605 aa16.34■□□□□ 0.21
RNF220-202ENST00000355387 RBM25P49756 843 aaKnown RBP16.33■□□□□ 0.2
RNF220-202ENST00000355387 IFT57Q9NWB7 429 aa16.33■□□□□ 0.2
RNF220-202ENST00000355387 POLKQ9UBT6 870 aa16.33■□□□□ 0.2
RNF220-202ENST00000355387 CABP1Q9NZU7 370 aa16.32■□□□□ 0.2
RNF220-202ENST00000355387 GCC1Q96CN9 775 aa16.32■□□□□ 0.2
RNF220-202ENST00000355387 L1TD1Q5T7N2 865 aaKnown RBP16.32■□□□□ 0.2
RNF220-202ENST00000355387 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
RNF220-202ENST00000355387 ZNF853P0CG23 659 aa16.31■□□□□ 0.2
RNF220-202ENST00000355387 SNX21Q969T3 373 aa16.31■□□□□ 0.2
RNF220-202ENST00000355387 GNAI1P63096 354 aa16.31■□□□□ 0.2
RNF220-202ENST00000355387 LMOD3Q0VAK6 560 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms