RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 FAM69CQ0P6D2 419 aa19.85■□□□□ 0.77
TNFSF13-202ENST00000349228 FBXO31Q5XUX0 539 aaPredicted RBP19.85■□□□□ 0.77
TNFSF13-202ENST00000349228 CDK19Q9BWU1 502 aa19.85■□□□□ 0.77
TNFSF13-202ENST00000349228 PNPLA6Q8IY17 1366 aa19.85■□□□□ 0.77
TNFSF13-202ENST00000349228 NLRP1Q9C000 1473 aa19.85■□□□□ 0.77
TNFSF13-202ENST00000349228 GGNBP2Q9H3C7 697 aa19.85■□□□□ 0.77
TNFSF13-202ENST00000349228 TMPOP42166 694 aaKnown RBP19.84■□□□□ 0.77
TNFSF13-202ENST00000349228 CYB5RLQ6IPT4 315 aa19.84■□□□□ 0.77
TNFSF13-202ENST00000349228 U2SURPO15042 1029 aaKnown RBP19.82■□□□□ 0.76
TNFSF13-202ENST00000349228 DIAPH1O60610 1272 aaKnown RBP19.82■□□□□ 0.76
TNFSF13-202ENST00000349228 ZKSCAN2Q63HK3 967 aa19.82■□□□□ 0.76
TNFSF13-202ENST00000349228 RWDD1Q9H446 243 aaPredicted RBP19.82■□□□□ 0.76
TNFSF13-202ENST00000349228 SPATA31D1Q6ZQQ2 1576 aa19.82■□□□□ 0.76
TNFSF13-202ENST00000349228 DIP2BQ9P265 1576 aa19.82■□□□□ 0.76
TNFSF13-202ENST00000349228 ATP7BP35670 1465 aa19.81■□□□□ 0.76
TNFSF13-202ENST00000349228 A2ML1A8K2U0 1454 aa19.81■□□□□ 0.76
TNFSF13-202ENST00000349228 FCHSD2O94868 740 aa19.8■□□□□ 0.76
TNFSF13-202ENST00000349228 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.8■□□□□ 0.76
TNFSF13-202ENST00000349228 MVPQ14764 893 aaKnown RBP19.79■□□□□ 0.76
TNFSF13-202ENST00000349228 TRIM35Q9UPQ4 493 aa19.79■□□□□ 0.76
TNFSF13-202ENST00000349228 RIMS2Q9UQ26 1411 aa19.79■□□□□ 0.76
TNFSF13-202ENST00000349228 CABP1Q9NZU7 370 aa19.78■□□□□ 0.76
TNFSF13-202ENST00000349228 DZIP1LQ8IYY4 767 aaKnown RBP19.78■□□□□ 0.76
TNFSF13-202ENST00000349228 CDC42BPGQ6DT37 1551 aa19.77■□□□□ 0.76
TNFSF13-202ENST00000349228 NEFMP07197 916 aa19.77■□□□□ 0.76
TNFSF13-202ENST00000349228 RLBP1P12271 317 aa19.77■□□□□ 0.76
TNFSF13-202ENST00000349228 SIRT1Q96EB6 747 aa19.77■□□□□ 0.76
TNFSF13-202ENST00000349228 HDGFP51858 240 aaKnown RBP19.76■□□□□ 0.75
TNFSF13-202ENST00000349228 FTSJ3Q8IY81 847 aaKnown RBP19.76■□□□□ 0.75
TNFSF13-202ENST00000349228 ZNF428Q96B54 188 aa19.76■□□□□ 0.75
TNFSF13-202ENST00000349228 PCDHB15Q9Y5E8 787 aa19.76■□□□□ 0.75
TNFSF13-202ENST00000349228 LAS1LQ9Y4W2 734 aaKnown RBP19.75■□□□□ 0.75
TNFSF13-202ENST00000349228 RIPK4P57078 832 aa19.75■□□□□ 0.75
TNFSF13-202ENST00000349228 EXOSC9Q06265 439 aaKnown RBP19.75■□□□□ 0.75
TNFSF13-202ENST00000349228 KIF20BQ96Q89 1820 aa19.74■□□□□ 0.75
TNFSF13-202ENST00000349228 IPO8O15397 1037 aaKnown RBP19.73■□□□□ 0.75
TNFSF13-202ENST00000349228 SMC4Q9NTJ3 1288 aa19.73■□□□□ 0.75
TNFSF13-202ENST00000349228 DDX19BQ9UMR2 479 aa19.73■□□□□ 0.75
TNFSF13-202ENST00000349228 BCL2L13Q9BXK5 485 aa19.73■□□□□ 0.75
TNFSF13-202ENST00000349228 CALD1Q05682 793 aaKnown RBP19.72■□□□□ 0.75
TNFSF13-202ENST00000349228 ALDH1L2Q3SY69 923 aa19.72■□□□□ 0.75
TNFSF13-202ENST00000349228 KIF16BQ96L93 1317 aa19.72■□□□□ 0.75
TNFSF13-202ENST00000349228 KLHL34Q8N239 644 aa19.71■□□□□ 0.75
TNFSF13-202ENST00000349228 EDC4Q6P2E9 1401 aaKnown RBP19.71■□□□□ 0.75
TNFSF13-202ENST00000349228 VIRMAQ69YN4 1812 aaKnown RBP19.71■□□□□ 0.75
TNFSF13-202ENST00000349228 ATF7IPQ6VMQ6 1270 aa19.71■□□□□ 0.75
TNFSF13-202ENST00000349228 TSR2Q969E8 191 aaKnown RBP19.71■□□□□ 0.75
TNFSF13-202ENST00000349228 RIMBP3CA6NJZ7 1639 aa19.71■□□□□ 0.75
TNFSF13-202ENST00000349228 RIMBP3BA6NNM3 1639 aa19.71■□□□□ 0.75
TNFSF13-202ENST00000349228 RIMBP3Q9UFD9 1639 aa19.71■□□□□ 0.75
TNFSF13-202ENST00000349228 HDAC1Q13547 482 aaPredicted RBP19.7■□□□□ 0.74
TNFSF13-202ENST00000349228 POLKQ9UBT6 870 aa19.7■□□□□ 0.74
TNFSF13-202ENST00000349228 PDZRN3Q9UPQ7 1066 aa19.7■□□□□ 0.74
TNFSF13-202ENST00000349228 CPSF1Q10570 1443 aaKnown RBP19.7■□□□□ 0.74
TNFSF13-202ENST00000349228 WASLO00401 505 aaPredicted RBP19.69■□□□□ 0.74
TNFSF13-202ENST00000349228 SETD1AO15047 1707 aaKnown RBP19.69■□□□□ 0.74
TNFSF13-202ENST00000349228 BRPF1P55201 1214 aaPredicted RBP19.69■□□□□ 0.74
TNFSF13-202ENST00000349228 FAM135BQ49AJ0 1406 aa19.69■□□□□ 0.74
TNFSF13-202ENST00000349228 SSH1Q8WYL5 1049 aa19.69■□□□□ 0.74
TNFSF13-202ENST00000349228 TNNQ9UQP3 1299 aa19.69■□□□□ 0.74
TNFSF13-202ENST00000349228 UPF2Q9HAU5 1272 aaKnown RBP19.69■□□□□ 0.74
TNFSF13-202ENST00000349228 WAPLQ7Z5K2 1190 aa19.68■□□□□ 0.74
TNFSF13-202ENST00000349228 RSPH6AQ9H0K4 717 aa19.68■□□□□ 0.74
TNFSF13-202ENST00000349228 AATKQ6ZMQ8 1374 aa19.68■□□□□ 0.74
TNFSF13-202ENST00000349228 PPIP5K1Q6PFW1 1433 aa19.68■□□□□ 0.74
TNFSF13-202ENST00000349228 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
TNFSF13-202ENST00000349228 USP19O94966 1318 aa19.67■□□□□ 0.74
TNFSF13-202ENST00000349228 TRIM27P14373 513 aa19.67■□□□□ 0.74
TNFSF13-202ENST00000349228 BECN1Q14457 450 aa19.67■□□□□ 0.74
TNFSF13-202ENST00000349228 CHMP4BQ9H444 224 aaKnown RBP19.67■□□□□ 0.74
TNFSF13-202ENST00000349228 ESF1Q9H501 851 aaKnown RBP19.67■□□□□ 0.74
TNFSF13-202ENST00000349228 TECPR2O15040 1411 aa19.66■□□□□ 0.74
TNFSF13-202ENST00000349228 NFE2L2Q16236 605 aa19.65■□□□□ 0.74
TNFSF13-202ENST00000349228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.65■□□□□ 0.74
TNFSF13-202ENST00000349228 PRKAR2BP31323 418 aa19.64■□□□□ 0.74
TNFSF13-202ENST00000349228 ZNF692Q9BU19 519 aaPredicted RBP19.64■□□□□ 0.74
TNFSF13-202ENST00000349228 NOB1Q9ULX3 412 aaKnown RBP19.64■□□□□ 0.74
TNFSF13-202ENST00000349228 CDK12Q9NYV4 1490 aaPredicted RBP19.64■□□□□ 0.73
TNFSF13-202ENST00000349228 LRRC7Q96NW7 1537 aa19.64■□□□□ 0.73
TNFSF13-202ENST00000349228 NFKBIBQ15653 356 aa19.63■□□□□ 0.73
TNFSF13-202ENST00000349228 CCDC61Q9Y6R9 512 aa19.63■□□□□ 0.73
TNFSF13-202ENST00000349228 LMOD3Q0VAK6 560 aa19.63■□□□□ 0.73
TNFSF13-202ENST00000349228 ITPRIPQ8IWB1 547 aa19.63■□□□□ 0.73
TNFSF13-202ENST00000349228 KNDC1Q76NI1 1749 aa19.62■□□□□ 0.73
TNFSF13-202ENST00000349228 SLC4A3P48751 1232 aa19.62■□□□□ 0.73
TNFSF13-202ENST00000349228 ARHGAP45Q92619 1136 aa19.62■□□□□ 0.73
TNFSF13-202ENST00000349228 NRXN3Q9Y4C0 1643 aa19.62■□□□□ 0.73
TNFSF13-202ENST00000349228 TSPOAP1O95153 1857 aa19.61■□□□□ 0.73
TNFSF13-202ENST00000349228 IL13P35225 146 aa19.61■□□□□ 0.73
TNFSF13-202ENST00000349228 GNAI1P63096 354 aa19.61■□□□□ 0.73
TNFSF13-202ENST00000349228 NUDT16Q96DE0 195 aaKnown RBP19.61■□□□□ 0.73
TNFSF13-202ENST00000349228 SMC5Q8IY18 1101 aa19.61■□□□□ 0.73
TNFSF13-202ENST00000349228 ZBTB40Q9NUA8 1239 aa19.61■□□□□ 0.73
TNFSF13-202ENST00000349228 IFT57Q9NWB7 429 aa19.61■□□□□ 0.73
TNFSF13-202ENST00000349228 METP08581 1390 aa19.61■□□□□ 0.73
TNFSF13-202ENST00000349228 COG3Q96JB2 828 aa19.6■□□□□ 0.73
TNFSF13-202ENST00000349228 MLECQ14165 292 aa19.59■□□□□ 0.73
TNFSF13-202ENST00000349228 SEC24BO95487 1268 aa19.59■□□□□ 0.73
TNFSF13-202ENST00000349228 CPS1P31327 1500 aa19.59■□□□□ 0.73
TNFSF13-202ENST00000349228 TBC1D32Q96NH3 1257 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms