RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 SMARCE1Q969G3 411 aa16.18■□□□□ 0.18
TRIO-202ENST00000344204 MIA2Q96PC5 1412 aa16.18■□□□□ 0.18
TRIO-202ENST00000344204 TOMM22Q9NS69 142 aa16.18■□□□□ 0.18
TRIO-202ENST00000344204 RASSF4Q9H2L5 321 aa16.17■□□□□ 0.18
TRIO-202ENST00000344204 LMAN1P49257 510 aa16.17■□□□□ 0.18
TRIO-202ENST00000344204 LUZP1Q86V48 1076 aa16.17■□□□□ 0.18
TRIO-202ENST00000344204 OGFRQ9NZT2 677 aa16.17■□□□□ 0.18
TRIO-202ENST00000344204 HDGFL2Q7Z4V5 671 aaPredicted RBP16.17■□□□□ 0.18
TRIO-202ENST00000344204 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
TRIO-202ENST00000344204 TICAM2Q86XR7 235 aa16.16■□□□□ 0.18
TRIO-202ENST00000344204 MICALCLQ6ZW33 695 aa16.16■□□□□ 0.18
TRIO-202ENST00000344204 NF2P35240 595 aa16.16■□□□□ 0.18
TRIO-202ENST00000344204 SLC26A8Q96RN1 970 aa16.16■□□□□ 0.18
TRIO-202ENST00000344204 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
TRIO-202ENST00000344204 MYH10P35580 1976 aa16.15■□□□□ 0.18
TRIO-202ENST00000344204 NEMFO60524 1076 aa16.15■□□□□ 0.18
TRIO-202ENST00000344204 MAP3K11Q16584 847 aa16.15■□□□□ 0.18
TRIO-202ENST00000344204 CCDC144AA2RUR9 1427 aa16.14■□□□□ 0.17
TRIO-202ENST00000344204 CBFA2T2O43439 604 aa16.14■□□□□ 0.17
TRIO-202ENST00000344204 ZKSCAN5Q9Y2L8 839 aa16.14■□□□□ 0.17
TRIO-202ENST00000344204 JAKMIP3Q5VZ66 844 aa16.14■□□□□ 0.17
TRIO-202ENST00000344204 BRD2P25440 801 aaKnown RBP16.14■□□□□ 0.17
TRIO-202ENST00000344204 RBM33Q96EV2 1170 aaKnown RBP16.14■□□□□ 0.17
TRIO-202ENST00000344204 CRACR2AQ9BSW2 395 aa16.14■□□□□ 0.17
TRIO-202ENST00000344204 TCHHQ07283 1943 aa16.13■□□□□ 0.17
TRIO-202ENST00000344204 MCM3P25205 808 aa16.13■□□□□ 0.17
TRIO-202ENST00000344204 GABPB1Q06547 395 aaPredicted RBP16.13■□□□□ 0.17
TRIO-202ENST00000344204 RUNDC1Q96C34 613 aa16.13■□□□□ 0.17
TRIO-202ENST00000344204 API5Q9BZZ5 524 aaKnown RBP16.13■□□□□ 0.17
TRIO-202ENST00000344204 SFPQP23246 707 aaKnown RBP eCLIP16.13■□□□□ 0.171e-6■□□□□ 10.1
TRIO-202ENST00000344204 NUP62CLQ9H1M0 184 aa16.13■□□□□ 0.17
TRIO-202ENST00000344204 ADCY5O95622 1261 aa16.13■□□□□ 0.17
TRIO-202ENST00000344204 ZSCAN23Q3MJ62 389 aa16.13■□□□□ 0.17
TRIO-202ENST00000344204 SYNE3Q6ZMZ3 975 aa16.13■□□□□ 0.17
TRIO-202ENST00000344204 POTEB2H3BUK9 544 aa16.13■□□□□ 0.17
TRIO-202ENST00000344204 KRT85P78386 507 aa16.13■□□□□ 0.17
TRIO-202ENST00000344204 CEP57L1Q8IYX8 460 aa16.12■□□□□ 0.17
TRIO-202ENST00000344204 DMTNQ08495 405 aa16.12■□□□□ 0.17
TRIO-202ENST00000344204 CEP135Q66GS9 1140 aa16.12■□□□□ 0.17
TRIO-202ENST00000344204 TRIM29Q14134 588 aa16.12■□□□□ 0.17
TRIO-202ENST00000344204 FAM177A1Q8N128 213 aaPredicted RBP16.12■□□□□ 0.17
TRIO-202ENST00000344204 CPLX1O14810 134 aa16.12■□□□□ 0.17
TRIO-202ENST00000344204 FOSBP53539 338 aa16.12■□□□□ 0.17
TRIO-202ENST00000344204 ZNF396Q96N95 335 aaPredicted RBP16.12■□□□□ 0.17
TRIO-202ENST00000344204 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
TRIO-202ENST00000344204 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
TRIO-202ENST00000344204 ERLIN2O94905 339 aa16.11■□□□□ 0.17
TRIO-202ENST00000344204 RBM28Q9NW13 759 aaKnown RBP16.11■□□□□ 0.17
TRIO-202ENST00000344204 KIAA1328Q86T90 577 aa16.11■□□□□ 0.17
TRIO-202ENST00000344204 PPFIBP1Q86W92 1011 aa16.11■□□□□ 0.17
TRIO-202ENST00000344204 ODF2Q5BJF6 829 aa16.11■□□□□ 0.17
TRIO-202ENST00000344204 IBSPP21815 317 aaPredicted RBP16.1■□□□□ 0.17
TRIO-202ENST00000344204 ERC2O15083 957 aa16.1■□□□□ 0.17
TRIO-202ENST00000344204 NOLC1Q14978 699 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRIO-202ENST00000344204 FMNL2Q96PY5 1086 aa16.1■□□□□ 0.17
TRIO-202ENST00000344204 CCDC171Q6TFL3 1326 aa16.1■□□□□ 0.17
TRIO-202ENST00000344204 SARNPP82979 210 aaKnown RBP16.1■□□□□ 0.17
TRIO-202ENST00000344204 SSFA2P28290 1259 aa16.1■□□□□ 0.17
TRIO-202ENST00000344204 SERPINC1P01008 464 aa16.1■□□□□ 0.17
TRIO-202ENST00000344204 GBP2P32456 591 aaPredicted RBP16.1■□□□□ 0.17
TRIO-202ENST00000344204 A0A1B0GUL7 405 aa16.09■□□□□ 0.17
TRIO-202ENST00000344204 MYCBPQ99417 103 aaPredicted RBP16.09■□□□□ 0.17
TRIO-202ENST00000344204 FHOD3Q2V2M9 1422 aa16.09■□□□□ 0.17
TRIO-202ENST00000344204 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
TRIO-202ENST00000344204 PSMA5P28066 241 aa16.09■□□□□ 0.17
TRIO-202ENST00000344204 RNF187Q5TA31 235 aaPredicted RBP16.09■□□□□ 0.17
TRIO-202ENST00000344204 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
TRIO-202ENST00000344204 FGD6Q6ZV73 1430 aa16.09■□□□□ 0.17
TRIO-202ENST00000344204 UVSSAQ2YD98 709 aa16.09■□□□□ 0.17
TRIO-202ENST00000344204 CASQ1P31415 396 aa16.09■□□□□ 0.17
TRIO-202ENST00000344204 CPLX2Q6PUV4 134 aaKnown RBP16.09■□□□□ 0.17
TRIO-202ENST00000344204 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
TRIO-202ENST00000344204 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
TRIO-202ENST00000344204 ADAMTS8Q9UP79 889 aa16.09■□□□□ 0.17
TRIO-202ENST00000344204 TBC1D32Q96NH3 1257 aa16.08■□□□□ 0.17
TRIO-202ENST00000344204 CPSF2Q9P2I0 782 aaKnown RBP16.08■□□□□ 0.17
TRIO-202ENST00000344204 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.17
TRIO-202ENST00000344204 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.17
TRIO-202ENST00000344204 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.16
TRIO-202ENST00000344204 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.16
TRIO-202ENST00000344204 ZNF397Q8NF99 534 aaPredicted RBP16.07■□□□□ 0.16
TRIO-202ENST00000344204 LRRFIP2Q9Y608 721 aaKnown RBP16.07■□□□□ 0.16
TRIO-202ENST00000344204 ZSCAN12O43309 604 aa16.07■□□□□ 0.16
TRIO-202ENST00000344204 FILIP1LQ4L180 1135 aa16.07■□□□□ 0.16
TRIO-202ENST00000344204 NEXNQ0ZGT2 675 aa16.07■□□□□ 0.16
TRIO-202ENST00000344204 BAG4O95429 457 aaKnown RBP16.06■□□□□ 0.16
TRIO-202ENST00000344204 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
TRIO-202ENST00000344204 NKTRP30414 1462 aaKnown RBP16.06■□□□□ 0.16
TRIO-202ENST00000344204 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
TRIO-202ENST00000344204 UTP14CQ5TAP6 766 aaKnown RBP16.06■□□□□ 0.16
TRIO-202ENST00000344204 C10orf67Q8IYJ2 551 aa16.05■□□□□ 0.16
TRIO-202ENST00000344204 SMTNL1A8MU46 457 aa16.05■□□□□ 0.16
TRIO-202ENST00000344204 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
TRIO-202ENST00000344204 V9GYY5 206 aaPredicted RBP16.05■□□□□ 0.16
TRIO-202ENST00000344204 EZRP15311 586 aaKnown RBP16.05■□□□□ 0.16
TRIO-202ENST00000344204 CCDC47Q96A33 483 aaKnown RBP16.05■□□□□ 0.16
TRIO-202ENST00000344204 MEX3CQ5U5Q3 659 aaKnown RBP16.05■□□□□ 0.16
TRIO-202ENST00000344204 NOL7Q9UMY1 257 aaKnown RBP16.04■□□□□ 0.16
TRIO-202ENST00000344204 GSDMDP57764 484 aa16.04■□□□□ 0.16
TRIO-202ENST00000344204 POLA1P09884 1462 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms