RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 HDGFL2Q7Z4V5 671 aaPredicted RBP19.88■□□□□ 0.77
BRAT1-201ENST00000340611 CCDC61Q9Y6R9 512 aa19.88■□□□□ 0.77
BRAT1-201ENST00000340611 BRD4O60885 1362 aaPredicted RBP19.87■□□□□ 0.77
BRAT1-201ENST00000340611 C14orf37Q86TY3 774 aa19.87■□□□□ 0.77
BRAT1-201ENST00000340611 ATP7BP35670 1465 aa19.86■□□□□ 0.77
BRAT1-201ENST00000340611 FYB1O15117 783 aa19.86■□□□□ 0.77
BRAT1-201ENST00000340611 PTCH1Q13635 1447 aa19.86■□□□□ 0.77
BRAT1-201ENST00000340611 NPM2Q86SE8 214 aaKnown RBP19.86■□□□□ 0.77
BRAT1-201ENST00000340611 ZMYND15Q9H091 742 aa19.85■□□□□ 0.77
BRAT1-201ENST00000340611 NME9Q86XW9 330 aa19.84■□□□□ 0.77
BRAT1-201ENST00000340611 LMTK3Q96Q04 1460 aa19.83■□□□□ 0.77
BRAT1-201ENST00000340611 ACEP12821 1306 aa19.82■□□□□ 0.76
BRAT1-201ENST00000340611 NPC1L1Q9UHC9 1359 aa19.81■□□□□ 0.76
BRAT1-201ENST00000340611 NKTRP30414 1462 aaKnown RBP19.81■□□□□ 0.76
BRAT1-201ENST00000340611 PIK3R4Q99570 1358 aa19.81■□□□□ 0.76
BRAT1-201ENST00000340611 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
BRAT1-201ENST00000340611 USP32Q8NFA0 1604 aa19.81■□□□□ 0.76
BRAT1-201ENST00000340611 ADAMTS8Q9UP79 889 aa19.8■□□□□ 0.76
BRAT1-201ENST00000340611 NINLQ9Y2I6 1382 aa19.8■□□□□ 0.76
BRAT1-201ENST00000340611 NALCNQ8IZF0 1738 aa19.8■□□□□ 0.76
BRAT1-201ENST00000340611 MTHFSP49914 203 aa19.8■□□□□ 0.76
BRAT1-201ENST00000340611 SOX12O15370 315 aa19.79■□□□□ 0.76
BRAT1-201ENST00000340611 ADGRB2O60241 1585 aa19.78■□□□□ 0.76
BRAT1-201ENST00000340611 CPSF1Q10570 1443 aaKnown RBP19.77■□□□□ 0.76
BRAT1-201ENST00000340611 PPM1GO15355 546 aaPredicted RBP19.77■□□□□ 0.76
BRAT1-201ENST00000340611 CCDC146Q8IYE0 955 aa19.77■□□□□ 0.76
BRAT1-201ENST00000340611 NGDNQ8NEJ9 315 aaKnown RBP19.77■□□□□ 0.76
BRAT1-201ENST00000340611 STRCP1A6NGW2 1772 aa19.76■□□□□ 0.75
BRAT1-201ENST00000340611 NUTM2GQ5VZR2 741 aa19.75■□□□□ 0.75
BRAT1-201ENST00000340611 CDC42BPGQ6DT37 1551 aa19.75■□□□□ 0.75
BRAT1-201ENST00000340611 STRCQ7RTU9 1775 aa19.74■□□□□ 0.75
BRAT1-201ENST00000340611 XPCQ01831 940 aaPredicted RBP19.74■□□□□ 0.75
BRAT1-201ENST00000340611 WDR43Q15061 677 aaKnown RBP eCLIP19.74■□□□□ 0.75
BRAT1-201ENST00000340611 ITSN1Q15811 1721 aa19.74■□□□□ 0.75
BRAT1-201ENST00000340611 GLIPR1L2Q4G1C9 344 aa19.73■□□□□ 0.75
BRAT1-201ENST00000340611 ESCO1Q5FWF5 840 aa19.73■□□□□ 0.75
BRAT1-201ENST00000340611 ORAI2Q96SN7 254 aa19.73■□□□□ 0.75
BRAT1-201ENST00000340611 TOPAZ1Q8N9V7 1692 aa19.72■□□□□ 0.75
BRAT1-201ENST00000340611 KIF20BQ96Q89 1820 aa19.72■□□□□ 0.75
BRAT1-201ENST00000340611 PLEKHG3A1L390 1219 aa19.72■□□□□ 0.75
BRAT1-201ENST00000340611 ZNF335Q9H4Z2 1342 aaPredicted RBP19.71■□□□□ 0.75
BRAT1-201ENST00000340611 NUDCQ9Y266 331 aa19.71■□□□□ 0.75
BRAT1-201ENST00000340611 AKAP12Q02952 1782 aa19.71■□□□□ 0.75
BRAT1-201ENST00000340611 EDC4Q6P2E9 1401 aaKnown RBP19.71■□□□□ 0.75
BRAT1-201ENST00000340611 RRS1Q15050 365 aaKnown RBP19.71■□□□□ 0.75
BRAT1-201ENST00000340611 TTC21BQ7Z4L5 1316 aa19.7■□□□□ 0.74
BRAT1-201ENST00000340611 SMG6Q86US8 1419 aaKnown RBP19.7■□□□□ 0.74
BRAT1-201ENST00000340611 TMEM94Q12767 1356 aa19.7■□□□□ 0.74
BRAT1-201ENST00000340611 ADGRL3Q9HAR2 1447 aa19.7■□□□□ 0.74
BRAT1-201ENST00000340611 MON2Q7Z3U7 1717 aa19.7■□□□□ 0.74
BRAT1-201ENST00000340611 RSPH6AQ9H0K4 717 aa19.69■□□□□ 0.74
BRAT1-201ENST00000340611 EMILIN1Q9Y6C2 1016 aa19.69■□□□□ 0.74
BRAT1-201ENST00000340611 FMN2Q9NZ56 1722 aa19.69■□□□□ 0.74
BRAT1-201ENST00000340611 ZNF692Q9BU19 519 aaPredicted RBP19.68■□□□□ 0.74
BRAT1-201ENST00000340611 DDX17Q92841 729 aaKnown RBP19.68■□□□□ 0.74
BRAT1-201ENST00000340611 NSD2O96028 1365 aa19.68■□□□□ 0.74
BRAT1-201ENST00000340611 USP6P35125 1406 aa19.68■□□□□ 0.74
BRAT1-201ENST00000340611 FOXO3O43524 673 aa19.67■□□□□ 0.74
BRAT1-201ENST00000340611 PHF8Q9UPP1 1060 aa19.67■□□□□ 0.74
BRAT1-201ENST00000340611 COG3Q96JB2 828 aa19.66■□□□□ 0.74
BRAT1-201ENST00000340611 NWD1Q149M9 1564 aa19.65■□□□□ 0.74
BRAT1-201ENST00000340611 MAP2P11137 1827 aaKnown RBP19.65■□□□□ 0.74
BRAT1-201ENST00000340611 ANKRD26Q9UPS8 1709 aa19.65■□□□□ 0.74
BRAT1-201ENST00000340611 POLKQ9UBT6 870 aa19.65■□□□□ 0.74
BRAT1-201ENST00000340611 U2SURPO15042 1029 aaKnown RBP19.64■□□□□ 0.73
BRAT1-201ENST00000340611 A0A0U1RQG5 324 aaPredicted RBP19.63■□□□□ 0.73
BRAT1-201ENST00000340611 POLR3AO14802 1390 aaPredicted RBP19.63■□□□□ 0.73
BRAT1-201ENST00000340611 NEUROD2Q15784 382 aa19.62■□□□□ 0.73
BRAT1-201ENST00000340611 CDCA7LQ96GN5 454 aa19.62■□□□□ 0.73
BRAT1-201ENST00000340611 C19orf44Q9H6X5 657 aa19.62■□□□□ 0.73
BRAT1-201ENST00000340611 RRP7AQ9Y3A4 280 aaKnown RBP19.62■□□□□ 0.73
BRAT1-201ENST00000340611 SHPRHQ149N8 1683 aa19.62■□□□□ 0.73
BRAT1-201ENST00000340611 RNF123Q5XPI4 1314 aa19.62■□□□□ 0.73
BRAT1-201ENST00000340611 NRKQ7Z2Y5 1582 aa19.62■□□□□ 0.73
BRAT1-201ENST00000340611 APAF1O14727 1248 aa19.62■□□□□ 0.73
BRAT1-201ENST00000340611 U2AF1L5P0DN76 240 aaPredicted RBP19.62■□□□□ 0.73
BRAT1-201ENST00000340611 U2AF1Q01081 240 aaKnown RBP eCLIP19.62■□□□□ 0.73
BRAT1-201ENST00000340611 GSE1Q14687 1217 aa19.62■□□□□ 0.73
BRAT1-201ENST00000340611 LMOD2Q6P5Q4 547 aa19.61■□□□□ 0.73
BRAT1-201ENST00000340611 CFAP53Q96M91 514 aa19.61■□□□□ 0.73
BRAT1-201ENST00000340611 NLRP6P59044 892 aa19.6■□□□□ 0.73
BRAT1-201ENST00000340611 PSME1Q06323 249 aa19.6■□□□□ 0.73
BRAT1-201ENST00000340611 ANKARQ7Z5J8 1434 aa19.6■□□□□ 0.73
BRAT1-201ENST00000340611 ABTB2Q8N961 1025 aa19.6■□□□□ 0.73
BRAT1-201ENST00000340611 BLMP54132 1417 aaPredicted RBP19.59■□□□□ 0.73
BRAT1-201ENST00000340611 ATF3P18847 181 aa19.59■□□□□ 0.73
BRAT1-201ENST00000340611 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
BRAT1-201ENST00000340611 FRAT1Q92837 279 aaPredicted RBP19.58■□□□□ 0.73
BRAT1-201ENST00000340611 USP35Q9P2H5 1018 aa19.57■□□□□ 0.72
BRAT1-201ENST00000340611 XIRP1Q702N8 1843 aaKnown RBP19.56■□□□□ 0.72
BRAT1-201ENST00000340611 ZBTB7CA1YPR0 619 aa19.55■□□□□ 0.72
BRAT1-201ENST00000340611 HMOX1P09601 288 aa19.55■□□□□ 0.72
BRAT1-201ENST00000340611 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
BRAT1-201ENST00000340611 DIAPH1O60610 1272 aaKnown RBP19.55■□□□□ 0.72
BRAT1-201ENST00000340611 C1orf167Q5SNV9 1468 aa19.54■□□□□ 0.72
BRAT1-201ENST00000340611 OVOS2A0A0J9YW53 1432 aa19.54■□□□□ 0.72
BRAT1-201ENST00000340611 OVOS2Q6IE36 1432 aa19.54■□□□□ 0.72
BRAT1-201ENST00000340611 COL3A1P02461 1466 aaPredicted RBP19.54■□□□□ 0.72
BRAT1-201ENST00000340611 HSP90AB2PQ58FF8 381 aa19.53■□□□□ 0.72
BRAT1-201ENST00000340611 EXOC6Q8TAG9 804 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms