RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 LAS1LQ9Y4W2 734 aaKnown RBP19.37■□□□□ 0.69
TNFSF13-201ENST00000338784 ADGRB2O60241 1585 aa19.37■□□□□ 0.69
TNFSF13-201ENST00000338784 U2SURPO15042 1029 aaKnown RBP19.37■□□□□ 0.69
TNFSF13-201ENST00000338784 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
TNFSF13-201ENST00000338784 PMFBP1Q8TBY8 1022 aa19.36■□□□□ 0.69
TNFSF13-201ENST00000338784 PLEKHF1Q96S99 279 aa19.36■□□□□ 0.69
TNFSF13-201ENST00000338784 CD163L1Q9NR16 1453 aa19.36■□□□□ 0.69
TNFSF13-201ENST00000338784 MAPK8IP3Q9UPT6 1336 aa19.36■□□□□ 0.69
TNFSF13-201ENST00000338784 ALKQ9UM73 1620 aa19.35■□□□□ 0.69
TNFSF13-201ENST00000338784 CT47B1P0C2W7 299 aaPredicted RBP19.35■□□□□ 0.69
TNFSF13-201ENST00000338784 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
TNFSF13-201ENST00000338784 USP35Q9P2H5 1018 aa19.35■□□□□ 0.69
TNFSF13-201ENST00000338784 BCL2L13Q9BXK5 485 aa19.35■□□□□ 0.69
TNFSF13-201ENST00000338784 COL3A1P02461 1466 aaPredicted RBP19.34■□□□□ 0.69
TNFSF13-201ENST00000338784 RLBP1P12271 317 aa19.34■□□□□ 0.69
TNFSF13-201ENST00000338784 ARXQ96QS3 562 aa19.34■□□□□ 0.69
TNFSF13-201ENST00000338784 NLRP1Q9C000 1473 aa19.34■□□□□ 0.69
TNFSF13-201ENST00000338784 TMPOP42166 694 aaKnown RBP19.33■□□□□ 0.68
TNFSF13-201ENST00000338784 NEFMP07197 916 aa19.32■□□□□ 0.68
TNFSF13-201ENST00000338784 CABP1Q9NZU7 370 aa19.32■□□□□ 0.68
TNFSF13-201ENST00000338784 TNNQ9UQP3 1299 aa19.32■□□□□ 0.68
TNFSF13-201ENST00000338784 DIAPH1O60610 1272 aaKnown RBP19.3■□□□□ 0.68
TNFSF13-201ENST00000338784 PNNQ9H307 717 aaKnown RBP19.3■□□□□ 0.68
TNFSF13-201ENST00000338784 TRIM35Q9UPQ4 493 aa19.3■□□□□ 0.68
TNFSF13-201ENST00000338784 PCDHB15Q9Y5E8 787 aa19.3■□□□□ 0.68
TNFSF13-201ENST00000338784 ZKSCAN2Q63HK3 967 aa19.3■□□□□ 0.68
TNFSF13-201ENST00000338784 TSR2Q969E8 191 aaKnown RBP19.3■□□□□ 0.68
TNFSF13-201ENST00000338784 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
TNFSF13-201ENST00000338784 RIMS1Q86UR5 1692 aaKnown RBP19.29■□□□□ 0.68
TNFSF13-201ENST00000338784 MVPQ14764 893 aaKnown RBP19.28■□□□□ 0.68
TNFSF13-201ENST00000338784 IL16Q14005 1332 aa19.28■□□□□ 0.68
TNFSF13-201ENST00000338784 EXOSC9Q06265 439 aaKnown RBP19.28■□□□□ 0.68
TNFSF13-201ENST00000338784 RWDD1Q9H446 243 aaPredicted RBP19.28■□□□□ 0.68
TNFSF13-201ENST00000338784 A2ML1A8K2U0 1454 aa19.27■□□□□ 0.68
TNFSF13-201ENST00000338784 ANKRD26Q9UPS8 1709 aa19.27■□□□□ 0.68
TNFSF13-201ENST00000338784 SLC4A3P48751 1232 aa19.27■□□□□ 0.68
TNFSF13-201ENST00000338784 FTSJ3Q8IY81 847 aaKnown RBP19.27■□□□□ 0.68
TNFSF13-201ENST00000338784 DZIP1LQ8IYY4 767 aaKnown RBP19.27■□□□□ 0.68
TNFSF13-201ENST00000338784 RIPK4P57078 832 aa19.26■□□□□ 0.67
TNFSF13-201ENST00000338784 FBXO41Q8TF61 875 aa19.26■□□□□ 0.67
TNFSF13-201ENST00000338784 DLC1Q96QB1 1528 aa19.26■□□□□ 0.67
TNFSF13-201ENST00000338784 LMTK3Q96Q04 1460 aa19.26■□□□□ 0.67
TNFSF13-201ENST00000338784 SMC4Q9NTJ3 1288 aa19.26■□□□□ 0.67
TNFSF13-201ENST00000338784 RIMS2Q9UQ26 1411 aa19.25■□□□□ 0.67
TNFSF13-201ENST00000338784 WAPLQ7Z5K2 1190 aa19.25■□□□□ 0.67
TNFSF13-201ENST00000338784 EIF5BO60841 1220 aaKnown RBP19.24■□□□□ 0.67
TNFSF13-201ENST00000338784 ZMYM3Q14202 1370 aa19.24■□□□□ 0.67
TNFSF13-201ENST00000338784 FCHSD2O94868 740 aa19.24■□□□□ 0.67
TNFSF13-201ENST00000338784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.23■□□□□ 0.67
TNFSF13-201ENST00000338784 ATP7BP35670 1465 aa19.23■□□□□ 0.67
TNFSF13-201ENST00000338784 SSH1Q8WYL5 1049 aa19.22■□□□□ 0.67
TNFSF13-201ENST00000338784 PDZRN3Q9UPQ7 1066 aa19.22■□□□□ 0.67
TNFSF13-201ENST00000338784 MLECQ14165 292 aa19.21■□□□□ 0.67
TNFSF13-201ENST00000338784 USP19O94966 1318 aa19.21■□□□□ 0.67
TNFSF13-201ENST00000338784 SETD1AO15047 1707 aaKnown RBP19.21■□□□□ 0.67
TNFSF13-201ENST00000338784 TRIM27P14373 513 aa19.21■□□□□ 0.67
TNFSF13-201ENST00000338784 POLKQ9UBT6 870 aa19.21■□□□□ 0.67
TNFSF13-201ENST00000338784 ATF7IPQ6VMQ6 1270 aa19.2■□□□□ 0.66
TNFSF13-201ENST00000338784 DDX19BQ9UMR2 479 aa19.19■□□□□ 0.66
TNFSF13-201ENST00000338784 CDC42BPGQ6DT37 1551 aa19.19■□□□□ 0.66
TNFSF13-201ENST00000338784 SEC24BO95487 1268 aa19.19■□□□□ 0.66
TNFSF13-201ENST00000338784 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.19■□□□□ 0.66
TNFSF13-201ENST00000338784 ESF1Q9H501 851 aaKnown RBP19.19■□□□□ 0.66
TNFSF13-201ENST00000338784 KIF20BQ96Q89 1820 aa19.19■□□□□ 0.66
TNFSF13-201ENST00000338784 RSPH6AQ9H0K4 717 aa19.18■□□□□ 0.66
TNFSF13-201ENST00000338784 NOB1Q9ULX3 412 aaKnown RBP19.18■□□□□ 0.66
TNFSF13-201ENST00000338784 WASLO00401 505 aaPredicted RBP19.17■□□□□ 0.66
TNFSF13-201ENST00000338784 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
TNFSF13-201ENST00000338784 NFKBIBQ15653 356 aa19.17■□□□□ 0.66
TNFSF13-201ENST00000338784 ITPRIPQ8IWB1 547 aa19.17■□□□□ 0.66
TNFSF13-201ENST00000338784 KIF16BQ96L93 1317 aa19.16■□□□□ 0.66
TNFSF13-201ENST00000338784 VIRMAQ69YN4 1812 aaKnown RBP19.16■□□□□ 0.66
TNFSF13-201ENST00000338784 FER1L4A9Z1Z3 1794 aa19.16■□□□□ 0.66
TNFSF13-201ENST00000338784 IPO8O15397 1037 aaKnown RBP19.16■□□□□ 0.66
TNFSF13-201ENST00000338784 FAM135BQ49AJ0 1406 aa19.16■□□□□ 0.66
TNFSF13-201ENST00000338784 LRRC7Q96NW7 1537 aa19.16■□□□□ 0.66
TNFSF13-201ENST00000338784 FBLN1P23142 703 aa19.15■□□□□ 0.66
TNFSF13-201ENST00000338784 HSPA2P54652 639 aa19.15■□□□□ 0.66
TNFSF13-201ENST00000338784 HDAC1Q13547 482 aaPredicted RBP19.15■□□□□ 0.66
TNFSF13-201ENST00000338784 ALDH1L2Q3SY69 923 aa19.15■□□□□ 0.66
TNFSF13-201ENST00000338784 CPSF1Q10570 1443 aaKnown RBP19.15■□□□□ 0.66
TNFSF13-201ENST00000338784 EDC4Q6P2E9 1401 aaKnown RBP19.15■□□□□ 0.66
TNFSF13-201ENST00000338784 PPIP5K1Q6PFW1 1433 aa19.15■□□□□ 0.66
TNFSF13-201ENST00000338784 UPF2Q9HAU5 1272 aaKnown RBP19.15■□□□□ 0.66
TNFSF13-201ENST00000338784 NRXN3Q9Y4C0 1643 aa19.14■□□□□ 0.65
TNFSF13-201ENST00000338784 METP08581 1390 aa19.14■□□□□ 0.65
TNFSF13-201ENST00000338784 TNRQ92752 1358 aa19.13■□□□□ 0.65
TNFSF13-201ENST00000338784 UBR1Q8IWV7 1749 aa19.13■□□□□ 0.65
TNFSF13-201ENST00000338784 HDGFP51858 240 aaKnown RBP19.13■□□□□ 0.65
TNFSF13-201ENST00000338784 ZNF428Q96B54 188 aa19.13■□□□□ 0.65
TNFSF13-201ENST00000338784 BECN1Q14457 450 aa19.12■□□□□ 0.65
TNFSF13-201ENST00000338784 NFE2L2Q16236 605 aa19.12■□□□□ 0.65
TNFSF13-201ENST00000338784 TXNDC2Q86VQ3 553 aa19.12■□□□□ 0.65
TNFSF13-201ENST00000338784 TMEM57Q8N5G2 664 aa19.12■□□□□ 0.65
TNFSF13-201ENST00000338784 SIRT1Q96EB6 747 aa19.12■□□□□ 0.65
TNFSF13-201ENST00000338784 CALD1Q05682 793 aaKnown RBP19.12■□□□□ 0.65
TNFSF13-201ENST00000338784 NME9Q86XW9 330 aa19.12■□□□□ 0.65
TNFSF13-201ENST00000338784 EMILIN1Q9Y6C2 1016 aa19.12■□□□□ 0.65
TNFSF13-201ENST00000338784 HMOX1P09601 288 aa19.11■□□□□ 0.65
TNFSF13-201ENST00000338784 NUDT16Q96DE0 195 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms