RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 CANXP27824 592 aaKnown RBP30.06■■■□□ 2.4
CLPTM1-201ENST00000337392 NPM2Q86SE8 214 aaKnown RBP30.06■■■□□ 2.4
CLPTM1-201ENST00000337392 POLKQ9UBT6 870 aa30.06■■■□□ 2.4
CLPTM1-201ENST00000337392 COL3A1P02461 1466 aaPredicted RBP30.05■■■□□ 2.4
CLPTM1-201ENST00000337392 RRS1Q15050 365 aaKnown RBP30.05■■■□□ 2.4
CLPTM1-201ENST00000337392 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.05■■■□□ 2.4
CLPTM1-201ENST00000337392 CLUAP1Q96AJ1 413 aa30.04■■■□□ 2.4
CLPTM1-201ENST00000337392 DIAPH1O60610 1272 aaKnown RBP30.03■■■□□ 2.4
CLPTM1-201ENST00000337392 UBR1Q8IWV7 1749 aa30.02■■■□□ 2.4
CLPTM1-201ENST00000337392 DLC1Q96QB1 1528 aa30.02■■■□□ 2.4
CLPTM1-201ENST00000337392 TMPOP42166 694 aaKnown RBP30.02■■■□□ 2.4
CLPTM1-201ENST00000337392 TRIM35Q9UPQ4 493 aa30.02■■■□□ 2.4
CLPTM1-201ENST00000337392 RARSP54136 660 aaKnown RBP30.01■■■□□ 2.4
CLPTM1-201ENST00000337392 ADAMTS13Q76LX8 1427 aa30■■■□□ 2.39
CLPTM1-201ENST00000337392 SOX12O15370 315 aa30■■■□□ 2.39
CLPTM1-201ENST00000337392 RLBP1P12271 317 aa30■■■□□ 2.39
CLPTM1-201ENST00000337392 KDM2BQ8NHM5 1336 aa30■■■□□ 2.39
CLPTM1-201ENST00000337392 MAPK8IP3Q9UPT6 1336 aa29.98■■■□□ 2.39
CLPTM1-201ENST00000337392 PDE4AP27815 886 aa29.97■■■□□ 2.39
CLPTM1-201ENST00000337392 CPS1P31327 1500 aa29.97■■■□□ 2.39
CLPTM1-201ENST00000337392 RIPK4P57078 832 aa29.97■■■□□ 2.39
CLPTM1-201ENST00000337392 CCDC61Q9Y6R9 512 aa29.97■■■□□ 2.39
CLPTM1-201ENST00000337392 WDR63Q8IWG1 891 aa29.96■■■□□ 2.39
CLPTM1-201ENST00000337392 KIF20BQ96Q89 1820 aa29.96■■■□□ 2.39
CLPTM1-201ENST00000337392 THUMPD2Q9BTF0 503 aaKnown RBP29.96■■■□□ 2.39
CLPTM1-201ENST00000337392 PRKAR2BP31323 418 aa29.95■■■□□ 2.39
CLPTM1-201ENST00000337392 NGEFQ8N5V2 710 aa29.95■■■□□ 2.39
CLPTM1-201ENST00000337392 PHACTR3Q96KR7 559 aa29.95■■■□□ 2.39
CLPTM1-201ENST00000337392 RGS3P49796 1198 aa29.95■■■□□ 2.38
CLPTM1-201ENST00000337392 HDGFP51858 240 aaKnown RBP29.95■■■□□ 2.38
CLPTM1-201ENST00000337392 ANKRD26Q9UPS8 1709 aa29.94■■■□□ 2.38
CLPTM1-201ENST00000337392 PAK3O75914 559 aaPredicted RBP29.94■■■□□ 2.38
CLPTM1-201ENST00000337392 IGHDP01880 384 aa29.94■■■□□ 2.38
CLPTM1-201ENST00000337392 MAP2P11137 1827 aaKnown RBP29.93■■■□□ 2.38
CLPTM1-201ENST00000337392 CPSF1Q10570 1443 aaKnown RBP29.93■■■□□ 2.38
CLPTM1-201ENST00000337392 TCERG1O14776 1098 aaKnown RBP29.93■■■□□ 2.38
CLPTM1-201ENST00000337392 EXOSC9Q06265 439 aaKnown RBP29.93■■■□□ 2.38
CLPTM1-201ENST00000337392 ATP7BP35670 1465 aa29.92■■■□□ 2.38
CLPTM1-201ENST00000337392 CCDC27Q2M243 656 aa29.92■■■□□ 2.38
CLPTM1-201ENST00000337392 PTPRUQ92729 1446 aa29.92■■■□□ 2.38
CLPTM1-201ENST00000337392 PNPLA6Q8IY17 1366 aa29.91■■■□□ 2.38
CLPTM1-201ENST00000337392 PMFBP1Q8TBY8 1022 aa29.91■■■□□ 2.38
CLPTM1-201ENST00000337392 LAS1LQ9Y4W2 734 aaKnown RBP29.91■■■□□ 2.38
CLPTM1-201ENST00000337392 MED14O60244 1454 aa29.9■■■□□ 2.38
CLPTM1-201ENST00000337392 ADGRB2O60241 1585 aa29.89■■■□□ 2.38
CLPTM1-201ENST00000337392 RBM33Q96EV2 1170 aaKnown RBP29.89■■■□□ 2.37
CLPTM1-201ENST00000337392 AMOTL2Q9Y2J4 779 aa29.88■■■□□ 2.37
CLPTM1-201ENST00000337392 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.88■■■□□ 2.37
CLPTM1-201ENST00000337392 RSPH6AQ9H0K4 717 aa29.88■■■□□ 2.37
CLPTM1-201ENST00000337392 BACH2Q9BYV9 841 aa29.87■■■□□ 2.37
CLPTM1-201ENST00000337392 MYH16Q9H6N6 1097 aa29.87■■■□□ 2.37
CLPTM1-201ENST00000337392 CENPQQ7L2Z9 268 aaPredicted RBP29.87■■■□□ 2.37
CLPTM1-201ENST00000337392 COG3Q96JB2 828 aa29.87■■■□□ 2.37
CLPTM1-201ENST00000337392 EDC4Q6P2E9 1401 aaKnown RBP29.86■■■□□ 2.37
CLPTM1-201ENST00000337392 ERICH6Q7L0X2 663 aa29.86■■■□□ 2.37
CLPTM1-201ENST00000337392 LRRC7Q96NW7 1537 aa29.86■■■□□ 2.37
CLPTM1-201ENST00000337392 ACEP12821 1306 aa29.86■■■□□ 2.37
CLPTM1-201ENST00000337392 TECPR2O15040 1411 aa29.85■■■□□ 2.37
CLPTM1-201ENST00000337392 C3P01024 1663 aa29.85■■■□□ 2.37
CLPTM1-201ENST00000337392 FAM135BQ49AJ0 1406 aa29.85■■■□□ 2.37
CLPTM1-201ENST00000337392 EID1Q9Y6B2 187 aa29.85■■■□□ 2.37
CLPTM1-201ENST00000337392 PLEKHG1Q9ULL1 1385 aa29.82■■■□□ 2.37
CLPTM1-201ENST00000337392 IL13P35225 146 aa29.81■■■□□ 2.36
CLPTM1-201ENST00000337392 PDE3AQ14432 1141 aa29.81■■■□□ 2.36
CLPTM1-201ENST00000337392 ANP32AP39687 249 aaKnown RBP29.8■■■□□ 2.36
CLPTM1-201ENST00000337392 SSH1Q8WYL5 1049 aa29.8■■■□□ 2.36
CLPTM1-201ENST00000337392 SMC4Q9NTJ3 1288 aa29.8■■■□□ 2.36
CLPTM1-201ENST00000337392 CDC42BPGQ6DT37 1551 aa29.8■■■□□ 2.36
CLPTM1-201ENST00000337392 PCDHB15Q9Y5E8 787 aa29.8■■■□□ 2.36
CLPTM1-201ENST00000337392 FAM83GA6ND36 823 aa29.79■■■□□ 2.36
CLPTM1-201ENST00000337392 AEBP1Q8IUX7 1158 aa29.79■■■□□ 2.36
CLPTM1-201ENST00000337392 ELL2O00472 640 aaPredicted RBP29.78■■■□□ 2.36
CLPTM1-201ENST00000337392 FCHSD2O94868 740 aa29.78■■■□□ 2.36
CLPTM1-201ENST00000337392 DCTN1Q14203 1278 aa29.78■■■□□ 2.36
CLPTM1-201ENST00000337392 KNDC1Q76NI1 1749 aa29.77■■■□□ 2.36
CLPTM1-201ENST00000337392 TTC21BQ7Z4L5 1316 aa29.76■■■□□ 2.35
CLPTM1-201ENST00000337392 FER1L4A9Z1Z3 1794 aa29.75■■■□□ 2.35
CLPTM1-201ENST00000337392 SIRT1Q96EB6 747 aa29.75■■■□□ 2.35
CLPTM1-201ENST00000337392 NUTM2GQ5VZR2 741 aa29.74■■■□□ 2.35
CLPTM1-201ENST00000337392 NOP58Q9Y2X3 529 aaKnown RBP29.74■■■□□ 2.35
CLPTM1-201ENST00000337392 MS4A1P11836 297 aa29.74■■■□□ 2.35
CLPTM1-201ENST00000337392 HSP90AB2PQ58FF8 381 aa29.73■■■□□ 2.35
CLPTM1-201ENST00000337392 IPO9Q96P70 1041 aaKnown RBP29.73■■■□□ 2.35
CLPTM1-201ENST00000337392 KCNA6P17658 529 aa29.72■■■□□ 2.35
CLPTM1-201ENST00000337392 TRIM27P14373 513 aa29.72■■■□□ 2.35
CLPTM1-201ENST00000337392 MON2Q7Z3U7 1717 aa29.71■■■□□ 2.35
CLPTM1-201ENST00000337392 NOB1Q9ULX3 412 aaKnown RBP29.71■■■□□ 2.35
CLPTM1-201ENST00000337392 FTSJ3Q8IY81 847 aaKnown RBP29.7■■■□□ 2.35
CLPTM1-201ENST00000337392 TSPYL6Q8N831 410 aa29.7■■■□□ 2.35
CLPTM1-201ENST00000337392 ZNF692Q9BU19 519 aaPredicted RBP29.7■■■□□ 2.34
CLPTM1-201ENST00000337392 THEMISQ8N1K5 641 aaPredicted RBP29.69■■■□□ 2.34
CLPTM1-201ENST00000337392 ITSN1Q15811 1721 aa29.69■■■□□ 2.34
CLPTM1-201ENST00000337392 NFE2L2Q16236 605 aa29.68■■■□□ 2.34
CLPTM1-201ENST00000337392 NEFMP07197 916 aa29.68■■■□□ 2.34
CLPTM1-201ENST00000337392 EIF4A2Q14240 407 aaKnown RBP29.68■■■□□ 2.34
CLPTM1-201ENST00000337392 ZKSCAN2Q63HK3 967 aa29.68■■■□□ 2.34
CLPTM1-201ENST00000337392 AKAP12Q02952 1782 aa29.67■■■□□ 2.34
CLPTM1-201ENST00000337392 SULT6B1Q6IMI4 303 aa29.67■■■□□ 2.34
CLPTM1-201ENST00000337392 RGPD8O14715 1765 aaPredicted RBP29.66■■■□□ 2.34
CLPTM1-201ENST00000337392 C8orf34Q49A92 452 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms