RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 TNPO1Q92973 898 aaKnown RBP20.48■□□□□ 0.87
CACFD1-202ENST00000316948 EVC2Q86UK5 1308 aa20.48■□□□□ 0.87
CACFD1-202ENST00000316948 TRIM27P14373 513 aa20.48■□□□□ 0.87
CACFD1-202ENST00000316948 GAS2L3Q86XJ1 694 aa20.48■□□□□ 0.87
CACFD1-202ENST00000316948 HSP90AB1P08238 724 aaKnown RBP20.47■□□□□ 0.87
CACFD1-202ENST00000316948 EXOSC9Q06265 439 aaKnown RBP20.47■□□□□ 0.87
CACFD1-202ENST00000316948 U2SURPO15042 1029 aaKnown RBP20.46■□□□□ 0.87
CACFD1-202ENST00000316948 RRP9O43818 475 aaKnown RBP20.46■□□□□ 0.87
CACFD1-202ENST00000316948 ANKRD36BQ8N2N9 1353 aa20.46■□□□□ 0.87
CACFD1-202ENST00000316948 USP32Q8NFA0 1604 aa20.45■□□□□ 0.87
CACFD1-202ENST00000316948 TULP4Q9NRJ4 1543 aa20.45■□□□□ 0.86
CACFD1-202ENST00000316948 HDAC1Q13547 482 aaPredicted RBP20.45■□□□□ 0.86
CACFD1-202ENST00000316948 LNPKQ9C0E8 428 aa20.45■□□□□ 0.86
CACFD1-202ENST00000316948 GLI2P10070 1586 aa20.45■□□□□ 0.86
CACFD1-202ENST00000316948 SSH1Q8WYL5 1049 aa20.44■□□□□ 0.86
CACFD1-202ENST00000316948 ZMYND15Q9H091 742 aa20.44■□□□□ 0.86
CACFD1-202ENST00000316948 GGNBP2Q9H3C7 697 aa20.44■□□□□ 0.86
CACFD1-202ENST00000316948 RPGRIP1LQ68CZ1 1315 aa20.44■□□□□ 0.86
CACFD1-202ENST00000316948 STK26Q9P289 416 aa20.44■□□□□ 0.86
CACFD1-202ENST00000316948 DDX19BQ9UMR2 479 aa20.44■□□□□ 0.86
CACFD1-202ENST00000316948 FRMPD1Q5SYB0 1578 aa20.43■□□□□ 0.86
CACFD1-202ENST00000316948 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
CACFD1-202ENST00000316948 GBP4Q96PP9 640 aa20.42■□□□□ 0.86
CACFD1-202ENST00000316948 DDIT3P35638 169 aa20.42■□□□□ 0.86
CACFD1-202ENST00000316948 TMEM57Q8N5G2 664 aa20.42■□□□□ 0.86
CACFD1-202ENST00000316948 ATF7IPQ6VMQ6 1270 aa20.41■□□□□ 0.86
CACFD1-202ENST00000316948 SMC5Q8IY18 1101 aa20.41■□□□□ 0.86
CACFD1-202ENST00000316948 SRPK2P78362 688 aaKnown RBP20.41■□□□□ 0.86
CACFD1-202ENST00000316948 ISY1Q9ULR0 285 aaKnown RBP20.41■□□□□ 0.86
CACFD1-202ENST00000316948 ARHGEF28Q8N1W1 1705 aaKnown RBP20.4■□□□□ 0.86
CACFD1-202ENST00000316948 VGFO15240 615 aaPredicted RBP20.4■□□□□ 0.86
CACFD1-202ENST00000316948 RBM25P49756 843 aaKnown RBP20.4■□□□□ 0.86
CACFD1-202ENST00000316948 A0A1W2PP64 1363 aa20.4■□□□□ 0.86
CACFD1-202ENST00000316948 NSD2O96028 1365 aa20.4■□□□□ 0.86
CACFD1-202ENST00000316948 CD109Q6YHK3 1445 aa20.4■□□□□ 0.86
CACFD1-202ENST00000316948 TMPOP42166 694 aaKnown RBP20.4■□□□□ 0.86
CACFD1-202ENST00000316948 PLEKHF1Q96S99 279 aa20.39■□□□□ 0.85
CACFD1-202ENST00000316948 TRIM35Q9UPQ4 493 aa20.39■□□□□ 0.85
CACFD1-202ENST00000316948 ADGRB2O60241 1585 aa20.39■□□□□ 0.85
CACFD1-202ENST00000316948 ABCC3O15438 1527 aa20.39■□□□□ 0.85
CACFD1-202ENST00000316948 POGZQ7Z3K3 1410 aa20.39■□□□□ 0.85
CACFD1-202ENST00000316948 SNX21Q969T3 373 aa20.39■□□□□ 0.85
CACFD1-202ENST00000316948 SIGLEC1Q9BZZ2 1709 aa20.38■□□□□ 0.85
CACFD1-202ENST00000316948 HECW2Q9P2P5 1572 aa20.38■□□□□ 0.85
CACFD1-202ENST00000316948 NCOA3Q9Y6Q9 1424 aa20.37■□□□□ 0.85
CACFD1-202ENST00000316948 CD2BP2O95400 341 aaKnown RBP20.37■□□□□ 0.85
CACFD1-202ENST00000316948 RAB3GAP1Q15042 981 aa20.37■□□□□ 0.85
CACFD1-202ENST00000316948 PUS7Q96PZ0 661 aaKnown RBP20.36■□□□□ 0.85
CACFD1-202ENST00000316948 RAPGEF3O95398 923 aa20.36■□□□□ 0.85
CACFD1-202ENST00000316948 ZBTB40Q9NUA8 1239 aa20.36■□□□□ 0.85
CACFD1-202ENST00000316948 CAMSAP1Q5T5Y3 1602 aa20.36■□□□□ 0.85
CACFD1-202ENST00000316948 NUCB1Q02818 461 aa20.35■□□□□ 0.85
CACFD1-202ENST00000316948 NPM1P06748 294 aaKnown RBP eCLIP20.35■□□□□ 0.85
CACFD1-202ENST00000316948 IDI1Q13907 227 aa20.35■□□□□ 0.85
CACFD1-202ENST00000316948 SKOR2Q2VWA4 1001 aaPredicted RBP20.35■□□□□ 0.85
CACFD1-202ENST00000316948 NCBP3Q53F19 620 aaKnown RBP20.35■□□□□ 0.85
CACFD1-202ENST00000316948 RBM42Q9BTD8 480 aaKnown RBP20.35■□□□□ 0.85
CACFD1-202ENST00000316948 CIZ1Q9ULV3 898 aaPredicted RBP20.35■□□□□ 0.85
CACFD1-202ENST00000316948 ABCC11Q96J66 1382 aa20.35■□□□□ 0.85
CACFD1-202ENST00000316948 NEXMIFQ5QGS0 1516 aa20.35■□□□□ 0.85
CACFD1-202ENST00000316948 MLH3Q9UHC1 1453 aa20.35■□□□□ 0.85
CACFD1-202ENST00000316948 MINK1Q8N4C8 1332 aaPredicted RBP20.35■□□□□ 0.85
CACFD1-202ENST00000316948 CT47B1P0C2W7 299 aaPredicted RBP20.34■□□□□ 0.85
CACFD1-202ENST00000316948 CHD1LQ86WJ1 897 aa20.34■□□□□ 0.85
CACFD1-202ENST00000316948 RIPK4P57078 832 aa20.34■□□□□ 0.85
CACFD1-202ENST00000316948 FYB1O15117 783 aa20.33■□□□□ 0.85
CACFD1-202ENST00000316948 SSFA2P28290 1259 aa20.33■□□□□ 0.85
CACFD1-202ENST00000316948 ANKRD45Q5TZF3 282 aa20.33■□□□□ 0.84
CACFD1-202ENST00000316948 KIF2CQ99661 725 aa20.33■□□□□ 0.84
CACFD1-202ENST00000316948 NASPP49321 788 aaPredicted RBP20.31■□□□□ 0.84
CACFD1-202ENST00000316948 KIAA1211Q6ZU35 1233 aa20.3■□□□□ 0.84
CACFD1-202ENST00000316948 COL3A1P02461 1466 aaPredicted RBP20.3■□□□□ 0.84
CACFD1-202ENST00000316948 K7ELQ4 463 aaPredicted RBP20.3■□□□□ 0.84
CACFD1-202ENST00000316948 C1orf115Q9H7X2 142 aa20.3■□□□□ 0.84
CACFD1-202ENST00000316948 PRAM1Q96QH2 718 aa20.29■□□□□ 0.84
CACFD1-202ENST00000316948 DDX49Q9Y6V7 483 aaKnown RBP20.29■□□□□ 0.84
CACFD1-202ENST00000316948 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
CACFD1-202ENST00000316948 GAS2L2Q8NHY3 880 aa20.29■□□□□ 0.84
CACFD1-202ENST00000316948 TPM2P07951 284 aa20.29■□□□□ 0.84
CACFD1-202ENST00000316948 ANP32BQ92688 251 aaKnown RBP20.29■□□□□ 0.84
CACFD1-202ENST00000316948 PIK3C2BO00750 1634 aa20.28■□□□□ 0.84
CACFD1-202ENST00000316948 GOLGA6L22H0YM25 854 aa20.28■□□□□ 0.84
CACFD1-202ENST00000316948 FBLN1P23142 703 aa20.28■□□□□ 0.84
CACFD1-202ENST00000316948 CCDC173Q0VFZ6 552 aa20.28■□□□□ 0.84
CACFD1-202ENST00000316948 BMP2KLQ5H9B9 411 aa20.28■□□□□ 0.84
CACFD1-202ENST00000316948 TERF2IPQ9NYB0 399 aa20.28■□□□□ 0.84
CACFD1-202ENST00000316948 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.84
CACFD1-202ENST00000316948 TBC1D9Q6ZT07 1266 aa20.27■□□□□ 0.84
CACFD1-202ENST00000316948 NCLP19338 710 aaKnown RBP20.27■□□□□ 0.83
CACFD1-202ENST00000316948 PTMSP20962 102 aa20.27■□□□□ 0.83
CACFD1-202ENST00000316948 KIF16BQ96L93 1317 aa20.26■□□□□ 0.83
CACFD1-202ENST00000316948 IL16Q14005 1332 aa20.24■□□□□ 0.83
CACFD1-202ENST00000316948 ZSCAN30Q86W11 494 aa20.24■□□□□ 0.83
CACFD1-202ENST00000316948 CD163L1Q9NR16 1453 aa20.24■□□□□ 0.83
CACFD1-202ENST00000316948 MSNP26038 577 aaKnown RBP20.24■□□□□ 0.83
CACFD1-202ENST00000316948 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
CACFD1-202ENST00000316948 MYO5BQ9ULV0 1848 aa20.24■□□□□ 0.83
CACFD1-202ENST00000316948 BAG4O95429 457 aaKnown RBP20.23■□□□□ 0.83
CACFD1-202ENST00000316948 CFAP74Q9C0B2 1584 aa20.23■□□□□ 0.83
CACFD1-202ENST00000316948 ATAD2Q6PL18 1390 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms