RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 GZF1Q9H116 711 aaPredicted RBP24.1■■□□□ 1.45
HERPUD2-201ENST00000311350 MYO5BQ9ULV0 1848 aa24.1■■□□□ 1.45
HERPUD2-201ENST00000311350 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.1■■□□□ 1.45
HERPUD2-201ENST00000311350 SLC26A8Q96RN1 970 aa24.1■■□□□ 1.45
HERPUD2-201ENST00000311350 SPINK5Q9NQ38 1064 aaPredicted RBP24.1■■□□□ 1.45
HERPUD2-201ENST00000311350 AAMPQ13685 434 aa24.09■■□□□ 1.45
HERPUD2-201ENST00000311350 CCDC146Q8IYE0 955 aa24.09■■□□□ 1.45
HERPUD2-201ENST00000311350 CARD14Q9BXL6 1004 aa24.09■■□□□ 1.45
HERPUD2-201ENST00000311350 PLEKHG1Q9ULL1 1385 aa24.08■■□□□ 1.45
HERPUD2-201ENST00000311350 CFAP70Q5T0N1 1121 aa24.08■■□□□ 1.45
HERPUD2-201ENST00000311350 GLIPR1L2Q4G1C9 344 aa24.08■■□□□ 1.45
HERPUD2-201ENST00000311350 SPRYD3Q8NCJ5 442 aa24.08■■□□□ 1.45
HERPUD2-201ENST00000311350 PNNQ9H307 717 aaKnown RBP24.08■■□□□ 1.45
HERPUD2-201ENST00000311350 BECN1Q14457 450 aa24.07■■□□□ 1.44
HERPUD2-201ENST00000311350 STRCP1A6NGW2 1772 aa24.07■■□□□ 1.44
HERPUD2-201ENST00000311350 USP32Q8NFA0 1604 aa24.07■■□□□ 1.44
HERPUD2-201ENST00000311350 ADGRF5Q8IZF2 1346 aa24.07■■□□□ 1.44
HERPUD2-201ENST00000311350 NCBP3Q53F19 620 aaKnown RBP24.06■■□□□ 1.44
HERPUD2-201ENST00000311350 LRRC7Q96NW7 1537 aa24.06■■□□□ 1.44
HERPUD2-201ENST00000311350 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
HERPUD2-201ENST00000311350 NUTM2DQ5VT03 806 aaPredicted RBP24.05■■□□□ 1.44
HERPUD2-201ENST00000311350 VIRMAQ69YN4 1812 aaKnown RBP24.04■■□□□ 1.44
HERPUD2-201ENST00000311350 HSP90AA2PQ14568 343 aaPredicted RBP24.04■■□□□ 1.44
HERPUD2-201ENST00000311350 GOLGA6L3A6NEY3 463 aa24.04■■□□□ 1.44
HERPUD2-201ENST00000311350 SHPRHQ149N8 1683 aa24.03■■□□□ 1.44
HERPUD2-201ENST00000311350 CENPJQ9HC77 1338 aaPredicted RBP24.02■■□□□ 1.44
HERPUD2-201ENST00000311350 MAPK8IP3Q9UPT6 1336 aa24.02■■□□□ 1.44
HERPUD2-201ENST00000311350 CLCN1P35523 988 aa24.02■■□□□ 1.44
HERPUD2-201ENST00000311350 KCNA6P17658 529 aa24.02■■□□□ 1.44
HERPUD2-201ENST00000311350 FSD2A1L4K1 749 aa24.01■■□□□ 1.43
HERPUD2-201ENST00000311350 TOM1O60784 492 aa24.01■■□□□ 1.43
HERPUD2-201ENST00000311350 HSP90AA1P07900 732 aaKnown RBP24.01■■□□□ 1.43
HERPUD2-201ENST00000311350 TBC1D2Q9BYX2 928 aa24.01■■□□□ 1.43
HERPUD2-201ENST00000311350 WWC1Q8IX03 1113 aa24.01■■□□□ 1.43
HERPUD2-201ENST00000311350 PUS7Q96PZ0 661 aaKnown RBP24■■□□□ 1.43
HERPUD2-201ENST00000311350 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
HERPUD2-201ENST00000311350 CLUAP1Q96AJ1 413 aa23.98■■□□□ 1.43
HERPUD2-201ENST00000311350 TBX22Q9Y458 520 aa23.98■■□□□ 1.43
HERPUD2-201ENST00000311350 NSD3Q9BZ95 1437 aa23.97■■□□□ 1.43
HERPUD2-201ENST00000311350 RUNDC1Q96C34 613 aa23.97■■□□□ 1.43
HERPUD2-201ENST00000311350 CCDC27Q2M243 656 aa23.96■■□□□ 1.43
HERPUD2-201ENST00000311350 WDR63Q8IWG1 891 aa23.96■■□□□ 1.43
HERPUD2-201ENST00000311350 ADAMTS13Q76LX8 1427 aa23.96■■□□□ 1.43
HERPUD2-201ENST00000311350 ADGRB1O14514 1584 aa23.96■■□□□ 1.43
HERPUD2-201ENST00000311350 PANK1Q8TE04 598 aa23.96■■□□□ 1.43
HERPUD2-201ENST00000311350 COG6Q9Y2V7 657 aa23.96■■□□□ 1.43
HERPUD2-201ENST00000311350 RPGRIP1LQ68CZ1 1315 aa23.96■■□□□ 1.43
HERPUD2-201ENST00000311350 C14orf93Q9H972 538 aaKnown RBP23.95■■□□□ 1.42
HERPUD2-201ENST00000311350 PPLO60437 1756 aa23.95■■□□□ 1.42
HERPUD2-201ENST00000311350 MCM4P33991 863 aa23.94■■□□□ 1.42
HERPUD2-201ENST00000311350 PIP4K2BP78356 416 aa23.94■■□□□ 1.42
HERPUD2-201ENST00000311350 NWD1Q149M9 1564 aa23.94■■□□□ 1.42
HERPUD2-201ENST00000311350 QRICH2Q9H0J4 1663 aa23.94■■□□□ 1.42
HERPUD2-201ENST00000311350 RRP9O43818 475 aaKnown RBP23.93■■□□□ 1.42
HERPUD2-201ENST00000311350 MORC1Q86VD1 984 aa23.93■■□□□ 1.42
HERPUD2-201ENST00000311350 NSD2O96028 1365 aa23.93■■□□□ 1.42
HERPUD2-201ENST00000311350 TMEM94Q12767 1356 aa23.93■■□□□ 1.42
HERPUD2-201ENST00000311350 DIP2AQ14689 1571 aa23.92■■□□□ 1.42
HERPUD2-201ENST00000311350 PROSER2Q86WR7 435 aaPredicted RBP23.92■■□□□ 1.42
HERPUD2-201ENST00000311350 PMFBP1Q8TBY8 1022 aa23.92■■□□□ 1.42
HERPUD2-201ENST00000311350 TBC1D32Q96NH3 1257 aa23.92■■□□□ 1.42
HERPUD2-201ENST00000311350 NEXMIFQ5QGS0 1516 aa23.91■■□□□ 1.42
HERPUD2-201ENST00000311350 ALKQ9UM73 1620 aa23.9■■□□□ 1.42
HERPUD2-201ENST00000311350 ERBB4Q15303 1308 aa23.9■■□□□ 1.42
HERPUD2-201ENST00000311350 RARSP54136 660 aaKnown RBP23.9■■□□□ 1.42
HERPUD2-201ENST00000311350 PIK3R4Q99570 1358 aa23.89■■□□□ 1.42
HERPUD2-201ENST00000311350 CANXP27824 592 aaKnown RBP23.89■■□□□ 1.41
HERPUD2-201ENST00000311350 TRAK2O60296 914 aa23.88■■□□□ 1.41
HERPUD2-201ENST00000311350 RBM33Q96EV2 1170 aaKnown RBP23.88■■□□□ 1.41
HERPUD2-201ENST00000311350 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
HERPUD2-201ENST00000311350 XIRP1Q702N8 1843 aaKnown RBP23.87■■□□□ 1.41
HERPUD2-201ENST00000311350 CHD2O14647 1828 aaKnown RBP23.86■■□□□ 1.41
HERPUD2-201ENST00000311350 TCP11L2Q8N4U5 519 aa23.85■■□□□ 1.41
HERPUD2-201ENST00000311350 UPF2Q9HAU5 1272 aaKnown RBP23.85■■□□□ 1.41
HERPUD2-201ENST00000311350 NRXN3Q9Y4C0 1643 aa23.85■■□□□ 1.41
HERPUD2-201ENST00000311350 VGFO15240 615 aaPredicted RBP23.85■■□□□ 1.41
HERPUD2-201ENST00000311350 CT47B1P0C2W7 299 aaPredicted RBP23.85■■□□□ 1.41
HERPUD2-201ENST00000311350 ADGRB2O60241 1585 aa23.85■■□□□ 1.41
HERPUD2-201ENST00000311350 TNNQ9UQP3 1299 aa23.84■■□□□ 1.41
HERPUD2-201ENST00000311350 PCDHB15Q9Y5E8 787 aa23.83■■□□□ 1.41
HERPUD2-201ENST00000311350 ANKRD36BQ8N2N9 1353 aa23.83■■□□□ 1.4
HERPUD2-201ENST00000311350 ESPNB1AK53 854 aa23.83■■□□□ 1.4
HERPUD2-201ENST00000311350 MRE11P49959 708 aa23.82■■□□□ 1.4
HERPUD2-201ENST00000311350 PDZRN3Q9UPQ7 1066 aa23.82■■□□□ 1.4
HERPUD2-201ENST00000311350 AMOTL2Q9Y2J4 779 aa23.82■■□□□ 1.4
HERPUD2-201ENST00000311350 PTPRUQ92729 1446 aa23.82■■□□□ 1.4
HERPUD2-201ENST00000311350 HSPA1LP34931 641 aa23.82■■□□□ 1.4
HERPUD2-201ENST00000311350 SLC12A5Q9H2X9 1139 aa23.82■■□□□ 1.4
HERPUD2-201ENST00000311350 MYH16Q9H6N6 1097 aa23.82■■□□□ 1.4
HERPUD2-201ENST00000311350 GRPEL1Q9HAV7 217 aa23.82■■□□□ 1.4
HERPUD2-201ENST00000311350 TRAK1Q9UPV9 953 aa23.81■■□□□ 1.4
HERPUD2-201ENST00000311350 METP08581 1390 aa23.8■■□□□ 1.4
HERPUD2-201ENST00000311350 MSH6P52701 1360 aa23.8■■□□□ 1.4
HERPUD2-201ENST00000311350 EVC2Q86UK5 1308 aa23.78■■□□□ 1.4
HERPUD2-201ENST00000311350 NCOA3Q9Y6Q9 1424 aa23.78■■□□□ 1.4
HERPUD2-201ENST00000311350 MTHFSP49914 203 aa23.78■■□□□ 1.4
HERPUD2-201ENST00000311350 TULP4Q9NRJ4 1543 aa23.77■■□□□ 1.4
HERPUD2-201ENST00000311350 RWDD1Q9H446 243 aaPredicted RBP23.77■■□□□ 1.4
HERPUD2-201ENST00000311350 RLBP1P12271 317 aa23.77■■□□□ 1.4
HERPUD2-201ENST00000311350 CHMP5Q9NZZ3 219 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms