RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 DEPDC5O75140 1603 aa17.96■□□□□ 0.47
KDM1B-201ENST00000297792 KIF1BO60333 1816 aa17.96■□□□□ 0.47
KDM1B-201ENST00000297792 SOX12O15370 315 aa17.95■□□□□ 0.46
KDM1B-201ENST00000297792 FOXD4L5Q5VV16 416 aaPredicted RBP17.95■□□□□ 0.46
KDM1B-201ENST00000297792 FOXD4L4Q8WXT5 416 aaPredicted RBP17.95■□□□□ 0.46
KDM1B-201ENST00000297792 ZNF518AQ6AHZ1 1483 aa17.95■□□□□ 0.46
KDM1B-201ENST00000297792 GRPEL1Q9HAV7 217 aa17.95■□□□□ 0.46
KDM1B-201ENST00000297792 TRIM35Q9UPQ4 493 aa17.95■□□□□ 0.46
KDM1B-201ENST00000297792 ABCA9Q8IUA7 1624 aa17.95■□□□□ 0.46
KDM1B-201ENST00000297792 DDX11L8A8MPP1 907 aa17.95■□□□□ 0.46
KDM1B-201ENST00000297792 CHD1LQ86WJ1 897 aa17.95■□□□□ 0.46
KDM1B-201ENST00000297792 TNPO1Q92973 898 aaKnown RBP17.95■□□□□ 0.46
KDM1B-201ENST00000297792 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
KDM1B-201ENST00000297792 MYOM2P54296 1465 aa17.94■□□□□ 0.46
KDM1B-201ENST00000297792 VWDEQ8N2E2 1590 aa17.94■□□□□ 0.46
KDM1B-201ENST00000297792 ZBTB7CA1YPR0 619 aa17.94■□□□□ 0.46
KDM1B-201ENST00000297792 CYB5RLQ6IPT4 315 aa17.94■□□□□ 0.46
KDM1B-201ENST00000297792 AAMPQ13685 434 aa17.94■□□□□ 0.46
KDM1B-201ENST00000297792 CABP1Q9NZU7 370 aa17.94■□□□□ 0.46
KDM1B-201ENST00000297792 GBP4Q96PP9 640 aa17.93■□□□□ 0.46
KDM1B-201ENST00000297792 NLRP1Q9C000 1473 aa17.93■□□□□ 0.46
KDM1B-201ENST00000297792 TERF2IPQ9NYB0 399 aa17.92■□□□□ 0.46
KDM1B-201ENST00000297792 MRE11P49959 708 aa17.92■□□□□ 0.46
KDM1B-201ENST00000297792 A0A1W2PP64 1363 aa17.92■□□□□ 0.46
KDM1B-201ENST00000297792 FYB1O15117 783 aa17.91■□□□□ 0.46
KDM1B-201ENST00000297792 CCDC27Q2M243 656 aa17.91■□□□□ 0.46
KDM1B-201ENST00000297792 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
KDM1B-201ENST00000297792 KIF16BQ96L93 1317 aa17.91■□□□□ 0.46
KDM1B-201ENST00000297792 HDGFL2Q7Z4V5 671 aaPredicted RBP17.91■□□□□ 0.46
KDM1B-201ENST00000297792 NUTM2FA1L443 756 aa17.9■□□□□ 0.46
KDM1B-201ENST00000297792 NCKAP5LQ9HCH0 1330 aa17.9■□□□□ 0.46
KDM1B-201ENST00000297792 CD2BP2O95400 341 aaKnown RBP17.9■□□□□ 0.46
KDM1B-201ENST00000297792 TSPYL6Q8N831 410 aa17.9■□□□□ 0.46
KDM1B-201ENST00000297792 ZBTB40Q9NUA8 1239 aa17.9■□□□□ 0.46
KDM1B-201ENST00000297792 HDAC1Q13547 482 aaPredicted RBP17.9■□□□□ 0.46
KDM1B-201ENST00000297792 SSFA2P28290 1259 aa17.89■□□□□ 0.45
KDM1B-201ENST00000297792 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
KDM1B-201ENST00000297792 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
KDM1B-201ENST00000297792 ZRANB1Q9UGI0 708 aa17.89■□□□□ 0.45
KDM1B-201ENST00000297792 DDX49Q9Y6V7 483 aaKnown RBP17.89■□□□□ 0.45
KDM1B-201ENST00000297792 ANP32BQ92688 251 aaKnown RBP17.89■□□□□ 0.45
KDM1B-201ENST00000297792 GOLGA6L22H0YM25 854 aa17.88■□□□□ 0.45
KDM1B-201ENST00000297792 SMC5Q8IY18 1101 aa17.88■□□□□ 0.45
KDM1B-201ENST00000297792 ATAD2Q6PL18 1390 aa17.88■□□□□ 0.45
KDM1B-201ENST00000297792 POGZQ7Z3K3 1410 aa17.88■□□□□ 0.45
KDM1B-201ENST00000297792 NOL8Q76FK4 1167 aaKnown RBP17.88■□□□□ 0.45
KDM1B-201ENST00000297792 ARID3AQ99856 593 aa17.88■□□□□ 0.45
KDM1B-201ENST00000297792 CDK19Q9BWU1 502 aa17.88■□□□□ 0.45
KDM1B-201ENST00000297792 ARAP3Q8WWN8 1544 aa17.88■□□□□ 0.45
KDM1B-201ENST00000297792 YEATS2Q9ULM3 1422 aa17.87■□□□□ 0.45
KDM1B-201ENST00000297792 NUCB1Q02818 461 aa17.87■□□□□ 0.45
KDM1B-201ENST00000297792 ADGRB3O60242 1522 aa17.87■□□□□ 0.45
KDM1B-201ENST00000297792 TBC1D9Q6ZT07 1266 aa17.87■□□□□ 0.45
KDM1B-201ENST00000297792 FOXD4L6Q3SYB3 417 aaPredicted RBP17.86■□□□□ 0.45
KDM1B-201ENST00000297792 FOXD4L3Q6VB84 417 aaPredicted RBP17.86■□□□□ 0.45
KDM1B-201ENST00000297792 PHACTR3Q96KR7 559 aa17.86■□□□□ 0.45
KDM1B-201ENST00000297792 QRICH2Q9H0J4 1663 aa17.86■□□□□ 0.45
KDM1B-201ENST00000297792 GAS2L3Q86XJ1 694 aa17.86■□□□□ 0.45
KDM1B-201ENST00000297792 FAM83GA6ND36 823 aa17.86■□□□□ 0.45
KDM1B-201ENST00000297792 ANKRD36BQ8N2N9 1353 aa17.86■□□□□ 0.45
KDM1B-201ENST00000297792 SBNO2Q9Y2G9 1366 aa17.86■□□□□ 0.45
KDM1B-201ENST00000297792 ADGRB1O14514 1584 aa17.85■□□□□ 0.45
KDM1B-201ENST00000297792 ESPNB1AK53 854 aa17.85■□□□□ 0.45
KDM1B-201ENST00000297792 FRMPD1Q5SYB0 1578 aa17.85■□□□□ 0.45
KDM1B-201ENST00000297792 MCTP1Q6DN14 999 aa17.85■□□□□ 0.45
KDM1B-201ENST00000297792 PLEKHF1Q96S99 279 aa17.84■□□□□ 0.45
KDM1B-201ENST00000297792 EMILIN1Q9Y6C2 1016 aa17.84■□□□□ 0.45
KDM1B-201ENST00000297792 TULP4Q9NRJ4 1543 aa17.84■□□□□ 0.45
KDM1B-201ENST00000297792 NRXN1Q9ULB1 1477 aa17.84■□□□□ 0.45
KDM1B-201ENST00000297792 FSD2A1L4K1 749 aa17.83■□□□□ 0.45
KDM1B-201ENST00000297792 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.45
KDM1B-201ENST00000297792 HSP90AA2PQ14568 343 aaPredicted RBP17.83■□□□□ 0.44
KDM1B-201ENST00000297792 C16orf71Q8IYS4 520 aaPredicted RBP17.83■□□□□ 0.44
KDM1B-201ENST00000297792 UBE2Q2Q8WVN8 375 aa17.83■□□□□ 0.44
KDM1B-201ENST00000297792 K7ELQ4 463 aaPredicted RBP17.82■□□□□ 0.44
KDM1B-201ENST00000297792 RPGRIP1LQ68CZ1 1315 aa17.82■□□□□ 0.44
KDM1B-201ENST00000297792 RRS1Q15050 365 aaKnown RBP17.82■□□□□ 0.44
KDM1B-201ENST00000297792 VSIG10Q8N0Z9 540 aa17.82■□□□□ 0.44
KDM1B-201ENST00000297792 CT47B1P0C2W7 299 aaPredicted RBP17.82■□□□□ 0.44
KDM1B-201ENST00000297792 KIAA1210Q9ULL0 1709 aa17.82■□□□□ 0.44
KDM1B-201ENST00000297792 ABCC3O15438 1527 aa17.81■□□□□ 0.44
KDM1B-201ENST00000297792 SMARCA5O60264 1052 aaPredicted RBP17.81■□□□□ 0.44
KDM1B-201ENST00000297792 TWISTNBQ3B726 338 aaPredicted RBP17.81■□□□□ 0.44
KDM1B-201ENST00000297792 SHPRHQ149N8 1683 aa17.81■□□□□ 0.44
KDM1B-201ENST00000297792 CAVIN1Q6NZI2 390 aaKnown RBP17.81■□□□□ 0.44
KDM1B-201ENST00000297792 KRT24Q2M2I5 525 aa17.8■□□□□ 0.44
KDM1B-201ENST00000297792 SLC4A10Q6U841 1118 aa17.8■□□□□ 0.44
KDM1B-201ENST00000297792 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
KDM1B-201ENST00000297792 CHAMP1Q96JM3 812 aa17.8■□□□□ 0.44
KDM1B-201ENST00000297792 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
KDM1B-201ENST00000297792 GLI2P10070 1586 aa17.8■□□□□ 0.44
KDM1B-201ENST00000297792 NASPP49321 788 aaPredicted RBP17.79■□□□□ 0.44
KDM1B-201ENST00000297792 NME9Q86XW9 330 aa17.79■□□□□ 0.44
KDM1B-201ENST00000297792 BMP2KLQ5H9B9 411 aa17.79■□□□□ 0.44
KDM1B-201ENST00000297792 TXNDC2Q86VQ3 553 aa17.79■□□□□ 0.44
KDM1B-201ENST00000297792 CLCN1P35523 988 aa17.78■□□□□ 0.44
KDM1B-201ENST00000297792 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
KDM1B-201ENST00000297792 FAM69CQ0P6D2 419 aa17.78■□□□□ 0.44
KDM1B-201ENST00000297792 OTUD7AQ8TE49 926 aaPredicted RBP17.78■□□□□ 0.44
KDM1B-201ENST00000297792 MBIPQ9NS73 344 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms