RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 NISCHQ9Y2I1 1504 aa28.36■■■□□ 2.13
KDM1B-201ENST00000297792 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
KDM1B-201ENST00000297792 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
KDM1B-201ENST00000297792 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
KDM1B-201ENST00000297792 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
KDM1B-201ENST00000297792 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
KDM1B-201ENST00000297792 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
KDM1B-201ENST00000297792 HRCP23327 699 aa23.71■■□□□ 1.39
KDM1B-201ENST00000297792 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
KDM1B-201ENST00000297792 MYO15BQ96JP2 1530 aa23.66■■□□□ 1.38
KDM1B-201ENST00000297792 PPARGC1BQ86YN6 1023 aaKnown RBP23.64■■□□□ 1.37
KDM1B-201ENST00000297792 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
KDM1B-201ENST00000297792 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
KDM1B-201ENST00000297792 FAM9AQ8IZU1 332 aaPredicted RBP23.15■■□□□ 1.3
KDM1B-201ENST00000297792 TRIM26Q12899 539 aaPredicted RBP22.93■■□□□ 1.26
KDM1B-201ENST00000297792 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
KDM1B-201ENST00000297792 DCAF1Q9Y4B6 1507 aa22.85■■□□□ 1.25
KDM1B-201ENST00000297792 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
KDM1B-201ENST00000297792 ABCC9O60706 1549 aa22.74■■□□□ 1.23
KDM1B-201ENST00000297792 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.22
KDM1B-201ENST00000297792 TTBK1Q5TCY1 1321 aaPredicted RBP22.62■■□□□ 1.21
KDM1B-201ENST00000297792 ZEB1P37275 1124 aaPredicted RBP22.47■■□□□ 1.19
KDM1B-201ENST00000297792 RB1CC1Q8TDY2 1594 aa22.46■■□□□ 1.19
KDM1B-201ENST00000297792 CECR2Q9BXF3 1484 aa22.45■■□□□ 1.18
KDM1B-201ENST00000297792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.35■■□□□ 1.17
KDM1B-201ENST00000297792 CCER1Q8TC90 406 aaPredicted RBP22.31■■□□□ 1.16
KDM1B-201ENST00000297792 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
KDM1B-201ENST00000297792 SCAF1Q9H7N4 1312 aaKnown RBP22.24■■□□□ 1.15
KDM1B-201ENST00000297792 WIZO95785 1651 aa22.12■■□□□ 1.13
KDM1B-201ENST00000297792 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
KDM1B-201ENST00000297792 NACADO15069 1562 aa22.04■■□□□ 1.12
KDM1B-201ENST00000297792 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
KDM1B-201ENST00000297792 YTHDC1Q96MU7 727 aaKnown RBP21.92■■□□□ 1.1
KDM1B-201ENST00000297792 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
KDM1B-201ENST00000297792 DIEXFQ68CQ4 756 aaKnown RBP21.91■■□□□ 1.1
KDM1B-201ENST00000297792 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
KDM1B-201ENST00000297792 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
KDM1B-201ENST00000297792 GTF3C3Q9Y5Q9 886 aa21.83■■□□□ 1.09
KDM1B-201ENST00000297792 ACIN1Q9UKV3 1341 aaKnown RBP21.83■■□□□ 1.09
KDM1B-201ENST00000297792 ABCC8Q09428 1581 aa21.83■■□□□ 1.09
KDM1B-201ENST00000297792 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
KDM1B-201ENST00000297792 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
KDM1B-201ENST00000297792 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
KDM1B-201ENST00000297792 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
KDM1B-201ENST00000297792 SOGA1O94964 1423 aa21.68■■□□□ 1.06
KDM1B-201ENST00000297792 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
KDM1B-201ENST00000297792 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
KDM1B-201ENST00000297792 CEP162Q5TB80 1403 aa21.53■■□□□ 1.04
KDM1B-201ENST00000297792 CSRNP3Q8WYN3 585 aa21.53■■□□□ 1.04
KDM1B-201ENST00000297792 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.04
KDM1B-201ENST00000297792 SMARCA2P51531 1590 aa21.5■■□□□ 1.03
KDM1B-201ENST00000297792 ZNF316A6NFI3 1004 aaPredicted RBP21.49■■□□□ 1.03
KDM1B-201ENST00000297792 APLP2Q06481 763 aa21.49■■□□□ 1.03
KDM1B-201ENST00000297792 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
KDM1B-201ENST00000297792 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
KDM1B-201ENST00000297792 MIER1Q8N108 512 aa21.39■■□□□ 1.01
KDM1B-201ENST00000297792 WRNQ14191 1432 aaPredicted RBP eCLIP21.3■■□□□ 1
KDM1B-201ENST00000297792 TNIKQ9UKE5 1360 aa21.28■■□□□ 1
KDM1B-201ENST00000297792 BICRAQ9NZM4 1560 aa21.26■□□□□ 0.99
KDM1B-201ENST00000297792 ITGAEP38570 1179 aa21.22■□□□□ 0.99
KDM1B-201ENST00000297792 GOLGA3Q08378 1498 aa21.15■□□□□ 0.98
KDM1B-201ENST00000297792 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
KDM1B-201ENST00000297792 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
KDM1B-201ENST00000297792 CLIP1P30622 1438 aa21.1■□□□□ 0.97
KDM1B-201ENST00000297792 ATAD2BQ9ULI0 1458 aa21.1■□□□□ 0.97
KDM1B-201ENST00000297792 EEA1Q15075 1411 aa21.06■□□□□ 0.96
KDM1B-201ENST00000297792 RAPGEF2Q9Y4G8 1499 aa21.06■□□□□ 0.96
KDM1B-201ENST00000297792 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
KDM1B-201ENST00000297792 ATP1B4Q9UN42 357 aaPredicted RBP20.91■□□□□ 0.94
KDM1B-201ENST00000297792 KANK4Q5T7N3 995 aaPredicted RBP20.9■□□□□ 0.94
KDM1B-201ENST00000297792 BCANQ96GW7 911 aa20.88■□□□□ 0.93
KDM1B-201ENST00000297792 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
KDM1B-201ENST00000297792 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
KDM1B-201ENST00000297792 MYT1Q01538 1121 aa20.83■□□□□ 0.93
KDM1B-201ENST00000297792 KIF21BO75037 1637 aa20.77■□□□□ 0.92
KDM1B-201ENST00000297792 P3H3Q8IVL6 736 aa20.75■□□□□ 0.91
KDM1B-201ENST00000297792 SUPT16HQ9Y5B9 1047 aaKnown RBP20.74■□□□□ 0.91
KDM1B-201ENST00000297792 KCNH8Q96L42 1107 aa20.73■□□□□ 0.91
KDM1B-201ENST00000297792 HIRIP3Q9BW71 556 aaPredicted RBP20.72■□□□□ 0.91
KDM1B-201ENST00000297792 DHX57Q6P158 1386 aaKnown RBP20.69■□□□□ 0.9
KDM1B-201ENST00000297792 FAM50AQ14320 339 aaKnown RBP20.69■□□□□ 0.9
KDM1B-201ENST00000297792 TOP2BQ02880 1626 aa20.66■□□□□ 0.9
KDM1B-201ENST00000297792 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
KDM1B-201ENST00000297792 CUX1P39880 1505 aa20.65■□□□□ 0.9
KDM1B-201ENST00000297792 ARAP1Q96P48 1450 aa20.64■□□□□ 0.89
KDM1B-201ENST00000297792 KIF27Q86VH2 1401 aa20.59■□□□□ 0.89
KDM1B-201ENST00000297792 PRXQ9BXM0 1461 aa20.58■□□□□ 0.89
KDM1B-201ENST00000297792 SIN3AQ96ST3 1273 aa20.58■□□□□ 0.88
KDM1B-201ENST00000297792 FKBP8Q14318 412 aa20.55■□□□□ 0.88
KDM1B-201ENST00000297792 TRIM52Q96A61 297 aa20.53■□□□□ 0.88
KDM1B-201ENST00000297792 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
KDM1B-201ENST00000297792 CUX2O14529 1486 aa20.53■□□□□ 0.88
KDM1B-201ENST00000297792 CCNB3Q8WWL7 1395 aa20.5■□□□□ 0.87
KDM1B-201ENST00000297792 CLSPNQ9HAW4 1339 aa20.48■□□□□ 0.87
KDM1B-201ENST00000297792 TSHZ2Q9NRE2 1034 aa20.48■□□□□ 0.87
KDM1B-201ENST00000297792 NEFLP07196 543 aa20.47■□□□□ 0.87
KDM1B-201ENST00000297792 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
KDM1B-201ENST00000297792 ARHGAP35Q9NRY4 1499 aa20.46■□□□□ 0.87
KDM1B-201ENST00000297792 CFTRP13569 1480 aa20.45■□□□□ 0.86
KDM1B-201ENST00000297792 IGF1RP08069 1367 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms