RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 PANK2Q9BZ23 570 aa21.35■■□□□ 1.01
RTN1-201ENST00000267484 RPGRIP1LQ68CZ1 1315 aa21.34■■□□□ 1.01
RTN1-201ENST00000267484 HDAC1Q13547 482 aaPredicted RBP21.34■■□□□ 1.01
RTN1-201ENST00000267484 IDI1Q13907 227 aa21.34■■□□□ 1.01
RTN1-201ENST00000267484 FRMPD1Q5SYB0 1578 aa21.33■■□□□ 1.01
RTN1-201ENST00000267484 ADGRB2O60241 1585 aa21.33■■□□□ 1
RTN1-201ENST00000267484 USP32Q8NFA0 1604 aa21.33■■□□□ 1
RTN1-201ENST00000267484 XRCC6P12956 609 aaKnown RBP eCLIP21.32■■□□□ 1
RTN1-201ENST00000267484 C1orf115Q9H7X2 142 aa21.32■■□□□ 1
RTN1-201ENST00000267484 ZBTB40Q9NUA8 1239 aa21.32■■□□□ 1
RTN1-201ENST00000267484 THUMPD2Q9BTF0 503 aaKnown RBP21.32■■□□□ 1
RTN1-201ENST00000267484 NSD2O96028 1365 aa21.32■■□□□ 1
RTN1-201ENST00000267484 SMC5Q8IY18 1101 aa21.32■■□□□ 1
RTN1-201ENST00000267484 PRAM1Q96QH2 718 aa21.32■■□□□ 1
RTN1-201ENST00000267484 ZMYM3Q14202 1370 aa21.32■■□□□ 1
RTN1-201ENST00000267484 ABCC11Q96J66 1382 aa21.31■■□□□ 1
RTN1-201ENST00000267484 ARHGEF28Q8N1W1 1705 aaKnown RBP21.3■■□□□ 1
RTN1-201ENST00000267484 CAMSAP1Q5T5Y3 1602 aa21.3■■□□□ 1
RTN1-201ENST00000267484 CT47B1P0C2W7 299 aaPredicted RBP21.3■■□□□ 1
RTN1-201ENST00000267484 CHMP5Q9NZZ3 219 aa21.3■■□□□ 1
RTN1-201ENST00000267484 ELL2O00472 640 aaPredicted RBP21.29■■□□□ 1
RTN1-201ENST00000267484 DIAPH1O60610 1272 aaKnown RBP21.29■■□□□ 1
RTN1-201ENST00000267484 L1TD1Q5T7N2 865 aaKnown RBP21.29■■□□□ 1
RTN1-201ENST00000267484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.29■■□□□ 1
RTN1-201ENST00000267484 GOLGA6L3A6NEY3 463 aa21.29■■□□□ 1
RTN1-201ENST00000267484 HSCBQ8IWL3 235 aa21.29■■□□□ 1
RTN1-201ENST00000267484 ABCC3O15438 1527 aa21.29■■□□□ 1
RTN1-201ENST00000267484 TRAK2O60296 914 aa21.28■■□□□ 1
RTN1-201ENST00000267484 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
RTN1-201ENST00000267484 SIGLEC1Q9BZZ2 1709 aa21.28■■□□□ 1
RTN1-201ENST00000267484 HMOX1P09601 288 aa21.27■■□□□ 1
RTN1-201ENST00000267484 POGZQ7Z3K3 1410 aa21.27■■□□□ 1
RTN1-201ENST00000267484 NPM1P06748 294 aaKnown RBP eCLIP21.27■■□□□ 1
RTN1-201ENST00000267484 COL3A1P02461 1466 aaPredicted RBP21.27■■□□□ 1
RTN1-201ENST00000267484 PRKAR2BP31323 418 aa21.26■□□□□ 0.99
RTN1-201ENST00000267484 CABP1Q9NZU7 370 aa21.26■□□□□ 0.99
RTN1-201ENST00000267484 PUS7Q96PZ0 661 aaKnown RBP21.26■□□□□ 0.99
RTN1-201ENST00000267484 NEXMIFQ5QGS0 1516 aa21.25■□□□□ 0.99
RTN1-201ENST00000267484 NUCB1Q02818 461 aa21.25■□□□□ 0.99
RTN1-201ENST00000267484 TERF2IPQ9NYB0 399 aa21.25■□□□□ 0.99
RTN1-201ENST00000267484 NCBP3Q53F19 620 aaKnown RBP21.25■□□□□ 0.99
RTN1-201ENST00000267484 ANKRD45Q5TZF3 282 aa21.25■□□□□ 0.99
RTN1-201ENST00000267484 ZNF692Q9BU19 519 aaPredicted RBP21.24■□□□□ 0.99
RTN1-201ENST00000267484 CHD1LQ86WJ1 897 aa21.24■□□□□ 0.99
RTN1-201ENST00000267484 TSPYL6Q8N831 410 aa21.24■□□□□ 0.99
RTN1-201ENST00000267484 PHACTR3Q96KR7 559 aa21.24■□□□□ 0.99
RTN1-201ENST00000267484 HECW2Q9P2P5 1572 aa21.24■□□□□ 0.99
RTN1-201ENST00000267484 IPO8O15397 1037 aaKnown RBP21.23■□□□□ 0.99
RTN1-201ENST00000267484 KIF16BQ96L93 1317 aa21.23■□□□□ 0.99
RTN1-201ENST00000267484 FSD2A1L4K1 749 aa21.22■□□□□ 0.99
RTN1-201ENST00000267484 CDK19Q9BWU1 502 aa21.22■□□□□ 0.99
RTN1-201ENST00000267484 CD2BP2O95400 341 aaKnown RBP21.21■□□□□ 0.99
RTN1-201ENST00000267484 IL16Q14005 1332 aa21.21■□□□□ 0.99
RTN1-201ENST00000267484 CD163L1Q9NR16 1453 aa21.21■□□□□ 0.99
RTN1-201ENST00000267484 RBM42Q9BTD8 480 aaKnown RBP21.2■□□□□ 0.98
RTN1-201ENST00000267484 MLH3Q9UHC1 1453 aa21.2■□□□□ 0.98
RTN1-201ENST00000267484 HDGFL2Q7Z4V5 671 aaPredicted RBP21.19■□□□□ 0.98
RTN1-201ENST00000267484 HSP90AB1P08238 724 aaKnown RBP21.19■□□□□ 0.98
RTN1-201ENST00000267484 FBXO31Q5XUX0 539 aaPredicted RBP21.19■□□□□ 0.98
RTN1-201ENST00000267484 RSPH6AQ9H0K4 717 aa21.18■□□□□ 0.98
RTN1-201ENST00000267484 TNPO1Q92973 898 aaKnown RBP21.17■□□□□ 0.98
RTN1-201ENST00000267484 ZBTB7BO15156 539 aaPredicted RBP21.17■□□□□ 0.98
RTN1-201ENST00000267484 RBM25P49756 843 aaKnown RBP21.17■□□□□ 0.98
RTN1-201ENST00000267484 POLKQ9UBT6 870 aa21.17■□□□□ 0.98
RTN1-201ENST00000267484 PPIP5K1Q6PFW1 1433 aa21.17■□□□□ 0.98
RTN1-201ENST00000267484 ATAD2Q6PL18 1390 aa21.17■□□□□ 0.98
RTN1-201ENST00000267484 WAPLQ7Z5K2 1190 aa21.17■□□□□ 0.98
RTN1-201ENST00000267484 EMILIN1Q9Y6C2 1016 aa21.16■□□□□ 0.98
RTN1-201ENST00000267484 PTPRMP28827 1452 aa21.16■□□□□ 0.98
RTN1-201ENST00000267484 ALDH1L2Q3SY69 923 aa21.16■□□□□ 0.98
RTN1-201ENST00000267484 KIF2CQ99661 725 aa21.16■□□□□ 0.98
RTN1-201ENST00000267484 VAMP4O75379 141 aa21.16■□□□□ 0.98
RTN1-201ENST00000267484 FCHSD2O94868 740 aa21.16■□□□□ 0.98
RTN1-201ENST00000267484 SIRT2Q8IXJ6 389 aa21.15■□□□□ 0.98
RTN1-201ENST00000267484 ZRANB1Q9UGI0 708 aa21.15■□□□□ 0.98
RTN1-201ENST00000267484 LRRC7Q96NW7 1537 aa21.15■□□□□ 0.98
RTN1-201ENST00000267484 PIK3C2BO00750 1634 aa21.14■□□□□ 0.98
RTN1-201ENST00000267484 HSP90AA1P07900 732 aaKnown RBP21.14■□□□□ 0.97
RTN1-201ENST00000267484 DDIT3P35638 169 aa21.14■□□□□ 0.97
RTN1-201ENST00000267484 MRPL50Q8N5N7 158 aaKnown RBP21.14■□□□□ 0.97
RTN1-201ENST00000267484 TBC1D9Q6ZT07 1266 aa21.14■□□□□ 0.97
RTN1-201ENST00000267484 YTHDC2Q9H6S0 1430 aaKnown RBP21.14■□□□□ 0.97
RTN1-201ENST00000267484 BMP2KLQ5H9B9 411 aa21.13■□□□□ 0.97
RTN1-201ENST00000267484 PNPLA6Q8IY17 1366 aa21.13■□□□□ 0.97
RTN1-201ENST00000267484 MYO5BQ9ULV0 1848 aa21.13■□□□□ 0.97
RTN1-201ENST00000267484 FAM83GA6ND36 823 aa21.12■□□□□ 0.97
RTN1-201ENST00000267484 DCTN1Q14203 1278 aa21.12■□□□□ 0.97
RTN1-201ENST00000267484 MBIPQ9NS73 344 aa21.12■□□□□ 0.97
RTN1-201ENST00000267484 DDX11L8A8MPP1 907 aa21.11■□□□□ 0.97
RTN1-201ENST00000267484 PNNQ9H307 717 aaKnown RBP21.11■□□□□ 0.97
RTN1-201ENST00000267484 GRPEL1Q9HAV7 217 aa21.11■□□□□ 0.97
RTN1-201ENST00000267484 NFE2L2Q16236 605 aa21.11■□□□□ 0.97
RTN1-201ENST00000267484 GAS2L3Q86XJ1 694 aa21.11■□□□□ 0.97
RTN1-201ENST00000267484 SLC52A1Q9NWF4 448 aa21.11■□□□□ 0.97
RTN1-201ENST00000267484 STAG3Q9UJ98 1225 aa21.11■□□□□ 0.97
RTN1-201ENST00000267484 SNX21Q969T3 373 aa21.1■□□□□ 0.97
RTN1-201ENST00000267484 NCOA3Q9Y6Q9 1424 aa21.1■□□□□ 0.97
RTN1-201ENST00000267484 C8orf58Q8NAV2 365 aa21.1■□□□□ 0.97
RTN1-201ENST00000267484 MRE11P49959 708 aa21.09■□□□□ 0.97
RTN1-201ENST00000267484 FAM135BQ49AJ0 1406 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms