RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 FYB1O15117 783 aa17.45■□□□□ 0.38
TUBGCP3-201ENST00000261965 PLXNC1O60486 1568 aa17.45■□□□□ 0.38
TUBGCP3-201ENST00000261965 IPO8O15397 1037 aaKnown RBP17.45■□□□□ 0.38
TUBGCP3-201ENST00000261965 TRIM35Q9UPQ4 493 aa17.45■□□□□ 0.38
TUBGCP3-201ENST00000261965 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
TUBGCP3-201ENST00000261965 SLC4A10Q6U841 1118 aa17.43■□□□□ 0.38
TUBGCP3-201ENST00000261965 CDK19Q9BWU1 502 aa17.43■□□□□ 0.38
TUBGCP3-201ENST00000261965 CALD1Q05682 793 aaKnown RBP17.43■□□□□ 0.38
TUBGCP3-201ENST00000261965 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
TUBGCP3-201ENST00000261965 ATP7AQ04656 1500 aa17.43■□□□□ 0.38
TUBGCP3-201ENST00000261965 KDM5AP29375 1690 aaKnown RBP17.42■□□□□ 0.38
TUBGCP3-201ENST00000261965 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
TUBGCP3-201ENST00000261965 MCTP1Q6DN14 999 aa17.42■□□□□ 0.38
TUBGCP3-201ENST00000261965 EMILIN1Q9Y6C2 1016 aa17.42■□□□□ 0.38
TUBGCP3-201ENST00000261965 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.38
TUBGCP3-201ENST00000261965 RRS1Q15050 365 aaKnown RBP17.41■□□□□ 0.38
TUBGCP3-201ENST00000261965 ZCCHC11Q5TAX3 1644 aaKnown RBP17.41■□□□□ 0.38
TUBGCP3-201ENST00000261965 FAM83GA6ND36 823 aa17.41■□□□□ 0.38
TUBGCP3-201ENST00000261965 PKNOX2Q96KN3 472 aa17.41■□□□□ 0.38
TUBGCP3-201ENST00000261965 PHACTR3Q96KR7 559 aa17.41■□□□□ 0.38
TUBGCP3-201ENST00000261965 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
TUBGCP3-201ENST00000261965 A0A1W2PP64 1363 aa17.4■□□□□ 0.38
TUBGCP3-201ENST00000261965 NCKAP5LQ9HCH0 1330 aa17.4■□□□□ 0.38
TUBGCP3-201ENST00000261965 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
TUBGCP3-201ENST00000261965 R3HCC1Q9Y3T6 440 aaKnown RBP17.4■□□□□ 0.38
TUBGCP3-201ENST00000261965 NINLQ9Y2I6 1382 aa17.39■□□□□ 0.37
TUBGCP3-201ENST00000261965 ASXL2Q76L83 1435 aa17.39■□□□□ 0.37
TUBGCP3-201ENST00000261965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.39■□□□□ 0.37
TUBGCP3-201ENST00000261965 ATAD2Q6PL18 1390 aa17.38■□□□□ 0.37
TUBGCP3-201ENST00000261965 LAMC1P11047 1609 aa17.38■□□□□ 0.37
TUBGCP3-201ENST00000261965 CAVIN1Q6NZI2 390 aaKnown RBP17.38■□□□□ 0.37
TUBGCP3-201ENST00000261965 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
TUBGCP3-201ENST00000261965 NPATQ14207 1427 aa17.38■□□□□ 0.37
TUBGCP3-201ENST00000261965 CHD1LQ86WJ1 897 aa17.38■□□□□ 0.37
TUBGCP3-201ENST00000261965 NECTIN2Q92692 538 aa17.38■□□□□ 0.37
TUBGCP3-201ENST00000261965 ANTXR1Q9H6X2 564 aa17.38■□□□□ 0.37
TUBGCP3-201ENST00000261965 DDX11L8A8MPP1 907 aa17.37■□□□□ 0.37
TUBGCP3-201ENST00000261965 GRPEL1Q9HAV7 217 aa17.37■□□□□ 0.37
TUBGCP3-201ENST00000261965 IQGAP1P46940 1657 aa17.37■□□□□ 0.37
TUBGCP3-201ENST00000261965 ZNF428Q96B54 188 aa17.37■□□□□ 0.37
TUBGCP3-201ENST00000261965 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
TUBGCP3-201ENST00000261965 KRT24Q2M2I5 525 aa17.36■□□□□ 0.37
TUBGCP3-201ENST00000261965 NME9Q86XW9 330 aa17.36■□□□□ 0.37
TUBGCP3-201ENST00000261965 SPHKAPQ2M3C7 1700 aa17.35■□□□□ 0.37
TUBGCP3-201ENST00000261965 ANKRD36BQ8N2N9 1353 aa17.35■□□□□ 0.37
TUBGCP3-201ENST00000261965 ABCA6Q8N139 1617 aa17.35■□□□□ 0.37
TUBGCP3-201ENST00000261965 ESPNB1AK53 854 aa17.35■□□□□ 0.37
TUBGCP3-201ENST00000261965 CCDC27Q2M243 656 aa17.35■□□□□ 0.37
TUBGCP3-201ENST00000261965 MRE11P49959 708 aa17.35■□□□□ 0.37
TUBGCP3-201ENST00000261965 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
TUBGCP3-201ENST00000261965 KIF16BQ96L93 1317 aa17.34■□□□□ 0.37
TUBGCP3-201ENST00000261965 ZBTB40Q9NUA8 1239 aa17.34■□□□□ 0.37
TUBGCP3-201ENST00000261965 CD109Q6YHK3 1445 aa17.34■□□□□ 0.37
TUBGCP3-201ENST00000261965 NASPP49321 788 aaPredicted RBP17.34■□□□□ 0.37
TUBGCP3-201ENST00000261965 PHF23Q9BUL5 403 aaPredicted RBP17.34■□□□□ 0.37
TUBGCP3-201ENST00000261965 TRIM6-TRIM34B2RNG4 842 aa17.33■□□□□ 0.37
TUBGCP3-201ENST00000261965 TXNDC2Q86VQ3 553 aa17.33■□□□□ 0.37
TUBGCP3-201ENST00000261965 PLEKHF1Q96S99 279 aa17.33■□□□□ 0.37
TUBGCP3-201ENST00000261965 CASC1Q6TDU7 716 aa17.33■□□□□ 0.36
TUBGCP3-201ENST00000261965 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
TUBGCP3-201ENST00000261965 C16orf71Q8IYS4 520 aaPredicted RBP17.32■□□□□ 0.36
TUBGCP3-201ENST00000261965 ZNF518AQ6AHZ1 1483 aa17.32■□□□□ 0.36
TUBGCP3-201ENST00000261965 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
TUBGCP3-201ENST00000261965 MAP3K4Q9Y6R4 1608 aa17.32■□□□□ 0.36
TUBGCP3-201ENST00000261965 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
TUBGCP3-201ENST00000261965 UBE2Q2Q8WVN8 375 aa17.31■□□□□ 0.36
TUBGCP3-201ENST00000261965 CD2BP2O95400 341 aaKnown RBP17.31■□□□□ 0.36
TUBGCP3-201ENST00000261965 MYOM1P52179 1685 aa17.31■□□□□ 0.36
TUBGCP3-201ENST00000261965 HDAC1Q13547 482 aaPredicted RBP17.3■□□□□ 0.36
TUBGCP3-201ENST00000261965 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
TUBGCP3-201ENST00000261965 TNPO1Q92973 898 aaKnown RBP17.3■□□□□ 0.36
TUBGCP3-201ENST00000261965 AAMPQ13685 434 aa17.3■□□□□ 0.36
TUBGCP3-201ENST00000261965 SMC5Q8IY18 1101 aa17.3■□□□□ 0.36
TUBGCP3-201ENST00000261965 C8orf58Q8NAV2 365 aa17.3■□□□□ 0.36
TUBGCP3-201ENST00000261965 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
TUBGCP3-201ENST00000261965 PRPF40AO75400 957 aaKnown RBP17.3■□□□□ 0.36
TUBGCP3-201ENST00000261965 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
TUBGCP3-201ENST00000261965 RILPL2Q969X0 211 aa17.3■□□□□ 0.36
TUBGCP3-201ENST00000261965 ZMYND15Q9H091 742 aa17.29■□□□□ 0.36
TUBGCP3-201ENST00000261965 NUCB1Q02818 461 aa17.29■□□□□ 0.36
TUBGCP3-201ENST00000261965 TBC1D9Q6ZT07 1266 aa17.29■□□□□ 0.36
TUBGCP3-201ENST00000261965 MBIPQ9NS73 344 aa17.29■□□□□ 0.36
TUBGCP3-201ENST00000261965 RPGRIP1LQ68CZ1 1315 aa17.29■□□□□ 0.36
TUBGCP3-201ENST00000261965 SSFA2P28290 1259 aa17.28■□□□□ 0.36
TUBGCP3-201ENST00000261965 TET3O43151 1660 aa17.28■□□□□ 0.36
TUBGCP3-201ENST00000261965 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
TUBGCP3-201ENST00000261965 CEP152O94986 1710 aa17.27■□□□□ 0.36
TUBGCP3-201ENST00000261965 ESF1Q9H501 851 aaKnown RBP17.27■□□□□ 0.36
TUBGCP3-201ENST00000261965 MCM10Q7L590 875 aa17.27■□□□□ 0.36
TUBGCP3-201ENST00000261965 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.35
TUBGCP3-201ENST00000261965 FCHSD2O94868 740 aa17.26■□□□□ 0.35
TUBGCP3-201ENST00000261965 A0A0U1RQG5 324 aaPredicted RBP17.26■□□□□ 0.35
TUBGCP3-201ENST00000261965 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
TUBGCP3-201ENST00000261965 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
TUBGCP3-201ENST00000261965 MYOM2P54296 1465 aa17.26■□□□□ 0.35
TUBGCP3-201ENST00000261965 VAMP4O75379 141 aa17.26■□□□□ 0.35
TUBGCP3-201ENST00000261965 SBNO2Q9Y2G9 1366 aa17.26■□□□□ 0.35
TUBGCP3-201ENST00000261965 DTNBO60941 627 aa17.25■□□□□ 0.35
TUBGCP3-201ENST00000261965 PRDM10Q9NQV6 1147 aa17.25■□□□□ 0.35
TUBGCP3-201ENST00000261965 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms