RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 TSPOAP1O95153 1857 aa17.36■□□□□ 0.37
LIMD2-201ENST00000259006 TMEM57Q8N5G2 664 aa17.36■□□□□ 0.37
LIMD2-201ENST00000259006 DUOX2Q9NRD8 1548 aa17.35■□□□□ 0.37
LIMD2-201ENST00000259006 KANK1Q14678 1352 aa17.35■□□□□ 0.37
LIMD2-201ENST00000259006 EIF2AK4Q9P2K8 1649 aaKnown RBP17.35■□□□□ 0.37
LIMD2-201ENST00000259006 UQCRHLA0A096LP55 91 aa17.35■□□□□ 0.37
LIMD2-201ENST00000259006 UQCRHP07919 91 aa17.35■□□□□ 0.37
LIMD2-201ENST00000259006 ZSCAN20P17040 1043 aaPredicted RBP17.34■□□□□ 0.37
LIMD2-201ENST00000259006 UTP14CQ5TAP6 766 aaKnown RBP17.34■□□□□ 0.37
LIMD2-201ENST00000259006 SECISBP2LQ93073 1101 aaKnown RBP17.34■□□□□ 0.37
LIMD2-201ENST00000259006 CD2BP2O95400 341 aaKnown RBP17.34■□□□□ 0.37
LIMD2-201ENST00000259006 ATP7AQ04656 1500 aa17.34■□□□□ 0.37
LIMD2-201ENST00000259006 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
LIMD2-201ENST00000259006 ANKRD45Q5TZF3 282 aa17.33■□□□□ 0.37
LIMD2-201ENST00000259006 CABP2Q9NPB3 220 aa17.33■□□□□ 0.36
LIMD2-201ENST00000259006 STK26Q9P289 416 aa17.33■□□□□ 0.36
LIMD2-201ENST00000259006 FBLN1P23142 703 aa17.32■□□□□ 0.36
LIMD2-201ENST00000259006 DNTTIP2Q5QJE6 756 aaKnown RBP17.32■□□□□ 0.36
LIMD2-201ENST00000259006 WDR63Q8IWG1 891 aa17.32■□□□□ 0.36
LIMD2-201ENST00000259006 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.32■□□□□ 0.36
LIMD2-201ENST00000259006 CFAP65Q6ZU64 1925 aaKnown RBP17.31■□□□□ 0.36
LIMD2-201ENST00000259006 OFD1O75665 1012 aa17.31■□□□□ 0.36
LIMD2-201ENST00000259006 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
LIMD2-201ENST00000259006 ZFYVE16Q7Z3T8 1539 aa17.31■□□□□ 0.36
LIMD2-201ENST00000259006 MSNP26038 577 aaKnown RBP17.31■□□□□ 0.36
LIMD2-201ENST00000259006 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
LIMD2-201ENST00000259006 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
LIMD2-201ENST00000259006 ERVK-7P63135 1459 aa17.3■□□□□ 0.36
LIMD2-201ENST00000259006 APBB1O00213 710 aa17.3■□□□□ 0.36
LIMD2-201ENST00000259006 SYNMO15061 1565 aa17.29■□□□□ 0.36
LIMD2-201ENST00000259006 POLR3AO14802 1390 aaPredicted RBP17.29■□□□□ 0.36
LIMD2-201ENST00000259006 SSFA2P28290 1259 aa17.29■□□□□ 0.36
LIMD2-201ENST00000259006 CBX1P83916 185 aa17.29■□□□□ 0.36
LIMD2-201ENST00000259006 ATF7IPQ6VMQ6 1270 aa17.29■□□□□ 0.36
LIMD2-201ENST00000259006 CGNQ9P2M7 1197 aaKnown RBP17.29■□□□□ 0.36
LIMD2-201ENST00000259006 RTEL1-TNFRSF6BF6WH68 1400 aa17.29■□□□□ 0.36
LIMD2-201ENST00000259006 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
LIMD2-201ENST00000259006 BRD2P25440 801 aaKnown RBP17.29■□□□□ 0.36
LIMD2-201ENST00000259006 CERS3Q8IU89 383 aa17.29■□□□□ 0.36
LIMD2-201ENST00000259006 YEATS2Q9ULM3 1422 aa17.29■□□□□ 0.36
LIMD2-201ENST00000259006 DDX19BQ9UMR2 479 aa17.28■□□□□ 0.36
LIMD2-201ENST00000259006 POGZQ7Z3K3 1410 aa17.28■□□□□ 0.36
LIMD2-201ENST00000259006 FOXD4L5Q5VV16 416 aaPredicted RBP17.28■□□□□ 0.36
LIMD2-201ENST00000259006 FOXD4L4Q8WXT5 416 aaPredicted RBP17.28■□□□□ 0.36
LIMD2-201ENST00000259006 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
LIMD2-201ENST00000259006 IGSF3O75054 1194 aa17.28■□□□□ 0.36
LIMD2-201ENST00000259006 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
LIMD2-201ENST00000259006 ZNF692Q9BU19 519 aaPredicted RBP17.28■□□□□ 0.36
LIMD2-201ENST00000259006 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
LIMD2-201ENST00000259006 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.36
LIMD2-201ENST00000259006 ATP10AO60312 1499 aa17.27■□□□□ 0.35
LIMD2-201ENST00000259006 MAST1Q9Y2H9 1570 aa17.27■□□□□ 0.35
LIMD2-201ENST00000259006 MADDQ8WXG6 1647 aa17.26■□□□□ 0.35
LIMD2-201ENST00000259006 GBP4Q96PP9 640 aa17.26■□□□□ 0.35
LIMD2-201ENST00000259006 DDX49Q9Y6V7 483 aaKnown RBP17.26■□□□□ 0.35
LIMD2-201ENST00000259006 UNC13BO14795 1591 aa17.25■□□□□ 0.35
LIMD2-201ENST00000259006 TMPOP42166 694 aaKnown RBP17.25■□□□□ 0.35
LIMD2-201ENST00000259006 CHAMP1Q96JM3 812 aa17.25■□□□□ 0.35
LIMD2-201ENST00000259006 LAMC1P11047 1609 aa17.25■□□□□ 0.35
LIMD2-201ENST00000259006 ARAP3Q8WWN8 1544 aa17.25■□□□□ 0.35
LIMD2-201ENST00000259006 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
LIMD2-201ENST00000259006 PLXNC1O60486 1568 aa17.24■□□□□ 0.35
LIMD2-201ENST00000259006 IQGAP3Q86VI3 1631 aa17.24■□□□□ 0.35
LIMD2-201ENST00000259006 AEBP1Q8IUX7 1158 aa17.24■□□□□ 0.35
LIMD2-201ENST00000259006 ZSCAN30Q86W11 494 aa17.24■□□□□ 0.35
LIMD2-201ENST00000259006 CHD1LQ86WJ1 897 aa17.24■□□□□ 0.35
LIMD2-201ENST00000259006 GAS2L2Q8NHY3 880 aa17.24■□□□□ 0.35
LIMD2-201ENST00000259006 CCDC94Q9BW85 323 aaPredicted RBP17.24■□□□□ 0.35
LIMD2-201ENST00000259006 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
LIMD2-201ENST00000259006 KIF20AO95235 890 aa17.22■□□□□ 0.35
LIMD2-201ENST00000259006 MTERF4Q7Z6M4 381 aaKnown RBP17.22■□□□□ 0.35
LIMD2-201ENST00000259006 MYOM1P52179 1685 aa17.22■□□□□ 0.35
LIMD2-201ENST00000259006 VIRMAQ69YN4 1812 aaKnown RBP17.22■□□□□ 0.35
LIMD2-201ENST00000259006 MCTP1Q6DN14 999 aa17.22■□□□□ 0.35
LIMD2-201ENST00000259006 TRIM35Q9UPQ4 493 aa17.22■□□□□ 0.35
LIMD2-201ENST00000259006 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
LIMD2-201ENST00000259006 FBXO31Q5XUX0 539 aaPredicted RBP17.22■□□□□ 0.35
LIMD2-201ENST00000259006 SMC5Q8IY18 1101 aa17.22■□□□□ 0.35
LIMD2-201ENST00000259006 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
LIMD2-201ENST00000259006 HDAC1Q13547 482 aaPredicted RBP17.21■□□□□ 0.35
LIMD2-201ENST00000259006 ZBTB40Q9NUA8 1239 aa17.21■□□□□ 0.35
LIMD2-201ENST00000259006 KDM5AP29375 1690 aaKnown RBP17.21■□□□□ 0.35
LIMD2-201ENST00000259006 IQGAP1P46940 1657 aa17.21■□□□□ 0.35
LIMD2-201ENST00000259006 TEX2Q8IWB9 1127 aa17.21■□□□□ 0.35
LIMD2-201ENST00000259006 RNF17Q9BXT8 1623 aaKnown RBP17.21■□□□□ 0.35
LIMD2-201ENST00000259006 HMOX1P09601 288 aa17.2■□□□□ 0.34
LIMD2-201ENST00000259006 NOS1P29475 1434 aa17.2■□□□□ 0.34
LIMD2-201ENST00000259006 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
LIMD2-201ENST00000259006 KIDINS220Q9ULH0 1771 aa17.2■□□□□ 0.34
LIMD2-201ENST00000259006 PTPRTO14522 1441 aa17.2■□□□□ 0.34
LIMD2-201ENST00000259006 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
LIMD2-201ENST00000259006 ESF1Q9H501 851 aaKnown RBP17.2■□□□□ 0.34
LIMD2-201ENST00000259006 NUCB1Q02818 461 aa17.19■□□□□ 0.34
LIMD2-201ENST00000259006 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
LIMD2-201ENST00000259006 MPNDQ8N594 471 aa17.19■□□□□ 0.34
LIMD2-201ENST00000259006 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
LIMD2-201ENST00000259006 ATAD2Q6PL18 1390 aa17.19■□□□□ 0.34
LIMD2-201ENST00000259006 CLTCL1P53675 1640 aa17.19■□□□□ 0.34
LIMD2-201ENST00000259006 PKP1Q13835 747 aa17.19■□□□□ 0.34
LIMD2-201ENST00000259006 FOXD4L6Q3SYB3 417 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms